Trut008708.1
Basic Information
- Insect
- Toxorhynchites rutilus
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_029784135.1
- Location
- CM056647.1:138223769-138250897[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-110 1.5e-105 354.5 39.0 1 299 198 491 198 492 0.92 2 2 0.06 3.5e+03 -1.3 2.3 210 244 511 544 495 565 0.59
Sequence Information
- Coding Sequence
- ATGAGTAGTGACATGAGATTGACCATCAGCGAAGACGAGCACCACGGGTTCGGCACGGGTACCGCTGGTGGTGGTCGGAAGTTTTTCTACCACGAAGACGACGATGACGAGGAGCAGGGAGAGTTCTATAGTTTCGATCCGAGCGATCTAGACCAGTTCGGTGTTGGTTTGACGGCGGAGTTGAAAATTCGCGAATCACACGAAAAGCTTAACTTGGATATCAACCGGAACGATCTGCTGCGAAGTGGTGACCGCCGGTTACATCAAACGGTTAACGACAAAGTGTTACTACGTGATGGTGTAAGTGGTGGGAGTCCTAGTGGGGATAGTGTTTTCGATGGAAGTTCCTGTTCGCCGGAGGACGACGAACGGACTGGTGGTGGTCAGACCAGTGGGGTAGCGGGTGTTGATGAGGCCGATCGGAGCTTCGACAGTTTTGTGGGAAGCCAGCGATCGTCAGCTGATCAGGATCACCACAATATCGACGCACACCGCCAGTATCATCGGCTTTCGGTTTGCCATACCGGGGATGAGTTTAGTTCCGATGAGGACGAAGCGTTTGTGGAGCTGCTGGAGAAGGCAAATCATATAGCGGAGGCCCGCTTGGCAGCCCGGCGACAAGCACGTGCGGAAGCACGCGAGATTCGGATGCGGGAGCTCGAGCGACAGCAGAAAGAACTGGAACAGAATGCCGATCGTGTGTTCGACCTGCAGCAGCAATCCGTTGGATTATCGACGTCCGTTGGTGGGGACACTTCGCTGGGATCACGTTCCGCCCGGCTCACAGTCAACAGCACGGTACGTGGTAGCTCACTCTCCTCCCGAAGAAGCAGCGAAGACTCGCTAGAGGAAGAAGGGCGAAGTCTAAGGGATCTGCGGCATGAACTTAAGGATGTCGAAGAACGTTTCCGCAAGGCGATGGTCGCAAACGCCCAGCTGGACAACGAACGTGCCTCCCAGAACTACCAGATCCAACTGCTCAAGGATAAGCTGGAAGAGATGGAAGAATCCCACGCGCAGCTGCAACGTGAGCACAAAGAAAAATGCCGAGATCATGATGCCTTAAAACGAGCCAACGACAAGTTGTCCGAGGAGCTGAAGCTGGTCCAGGGCCAGTTGCAGGAGCGAGACACGCTGATCGAGGAGCAGGGACTGGTGATCGTGACGGTGGAAAACGAAGACGGTTCCGATGCGCGGCGAGCCCTAGTCACAGCCGACAACGCCCATCTATTGAAGTCCGCCCAAGGATCGTTAGATGTTAGACTTAAGAAATTCGCGGAGGAAAAGCAGGAGCTGCAGAACGACGTTCAGGCGCTACAGCAGCAGCTGAAGGACATGAGAACGAAGGGAAGGAAGTACAGCGCCGTCAACGGATCGCTGGACGACGATGACTACGAAGATGCACAAAgaGAAGCCAACAAACTCATCACCGACTACAAATACAAACTGCAGAAAGCGGAACAGGAGATCGCTAATCTGCAGGCCAGTTTAGCGCGGTCCGAATCGCAAGTTATCCGATACAGAAGCACTGCCGAAGCGGCAGAGAAGGCTGAAAGCGATTTGAAAATCGAAAGGAGAAAACTTCAGCGTGAGAACCGCGAAGCCATGGACCGCCTGGAGGAGTTGGAAACGTGCAACAACCATCTGCTGAAACGACTGGACAAGCTCAAGAACGCTAAAAGTGCGTTGCTGAAGGACCTCTGA
- Protein Sequence
- MSSDMRLTISEDEHHGFGTGTAGGGRKFFYHEDDDDEEQGEFYSFDPSDLDQFGVGLTAELKIRESHEKLNLDINRNDLLRSGDRRLHQTVNDKVLLRDGVSGGSPSGDSVFDGSSCSPEDDERTGGGQTSGVAGVDEADRSFDSFVGSQRSSADQDHHNIDAHRQYHRLSVCHTGDEFSSDEDEAFVELLEKANHIAEARLAARRQARAEAREIRMRELERQQKELEQNADRVFDLQQQSVGLSTSVGGDTSLGSRSARLTVNSTVRGSSLSSRRSSEDSLEEEGRSLRDLRHELKDVEERFRKAMVANAQLDNERASQNYQIQLLKDKLEEMEESHAQLQREHKEKCRDHDALKRANDKLSEELKLVQGQLQERDTLIEEQGLVIVTVENEDGSDARRALVTADNAHLLKSAQGSLDVRLKKFAEEKQELQNDVQALQQQLKDMRTKGRKYSAVNGSLDDDDYEDAQREANKLITDYKYKLQKAEQEIANLQASLARSESQVIRYRSTAEAAEKAESDLKIERRKLQRENREAMDRLEELETCNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -