Trut048791.1
Basic Information
- Insect
- Toxorhynchites rutilus
- Gene Symbol
- -
- Assembly
- GCA_029784135.1
- Location
- CM056649.1:281723973-281724680[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-10 4.6e-07 31.1 0.1 2 40 12 50 11 55 0.90 2 2 3.5 2.2e+03 0.1 0.0 24 35 166 178 166 184 0.81
Sequence Information
- Coding Sequence
- ATGGATCGGACATACGTGAAGAAAAGGCTAGCACCGGCTTCTTTAGATGCGGCCATTGACGCTATAAAAGGTAAAAGAATGACAGTCTCCCAAGCTGCACGATGCTATGTAATCCTTAGATCTACTCTACAAAAGCGAGTTAACGGACAGAGAGGCGTTAAAAGTACTACAGGAGGAAAACCCACTGCGATTCCGATTTATGTCGAAGCTCAAATTGCCTCGTGCATTAAAACGATGAAGAAATGGGGTTTTGGCTTATCCAAGATCGAAGTTCTACAGGCCATCGCACGGTATCTGACCGAAAACAATGTTCCCAATCCATTCAAACATTCTTTGCCCGGAGatgaatatttttataacttCAAGAAACGCCACGGTTTATCtcaaaagaaggctctattttTTGAGGTTgctcgaaaaatgaatgtggaTCCATTTATAATGGATAATTATTTTCAACTCCTAGAAAAAGTAACTCATGGAGTTCCTCCTGATCGAATCTACAATGTAGATAAGTCTAGTTTTTGGATTGATTCTACTCGTGTGAAGGTTGTTGGAGAGAAAGGGAGAGCAGCACACCGTGTAACAGCAGGACCTGCCAAAGAGAATATTACCGTGTTGATGGGTGGGAATGCAGTTGGTGGAAAACTACCTCCGCTGATTGTATTCAAAGCAGAAAAATGTATGGACAAGCTGGATGGCATCTAA
- Protein Sequence
- MDRTYVKKRLAPASLDAAIDAIKGKRMTVSQAARCYVILRSTLQKRVNGQRGVKSTTGGKPTAIPIYVEAQIASCIKTMKKWGFGLSKIEVLQAIARYLTENNVPNPFKHSLPGDEYFYNFKKRHGLSQKKALFFEVARKMNVDPFIMDNYFQLLEKVTHGVPPDRIYNVDKSSFWIDSTRVKVVGEKGRAAHRVTAGPAKENITVLMGGNAVGGKLPPLIVFKAEKCMDKLDGI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01471280;
- 90% Identity
- -
- 80% Identity
- -