Trut000154.1
Basic Information
- Insect
- Toxorhynchites rutilus
- Gene Symbol
- -
- Assembly
- GCA_029784135.1
- Location
- CM056647.1:3304806-3305615[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-12 2.5e-09 38.3 0.1 4 40 18 54 15 59 0.90 2 2 6.3 3.9e+03 -0.7 0.1 15 24 130 138 128 139 0.82
Sequence Information
- Coding Sequence
- ATGGCTCGGACATACGTGAAGAAAAGGCAAGCACCGGCATATTCTAAAGCTTCTTTAGATGCGGCCATTGACGCTATAAAAGGTAAAAGAATGACAGTGTCCCAAGCTGCACGATGCTATGTAATCCCTAGATCTACTCTACAAAAGCGAGTTAACGGACAGAGAGGCGTTAAAAGTACTACAGGAGGAAGACCCACTGCGATTCCGATTAATGTCGAAGCTCAAATTGCCTCGTGCATTAAAACGATGGAGAAATGGGGTTTTGGCTTATCCAAGACCGAAGTTCTACAGGCCATCGCACGGTATCTGATTGAAAACAATGTTCCTAATCCATTCAAACATTCTTTGCCCGGAgatgaatatttttataatttcaagAAACGTCACGGTTTATCTCAAAAGAAGGCTCAATCTGTTGAGGTTGCTCGAAAGAGAAATGTCGATCCATTTAGAATGGATAATTATTTTCAACTCCTAGAAAAAGTAACTCATGGAGTTCCTCCTAATCGAATCTACAATGTAGATGAGTCTAGTTTTTGCCTTGATCCTACTCGTGTGAAGATTGTTGGTGAGAAAGGGAGAGCAGCACACCGTGTAACAGCAGGACCTGCCAAAGAGAATATTACCGTATTGATGGGTGGGAATGCAGTTGGTGGAAAACTACCTCCGCTGATTGTATTCAAAGCAAATAACGTATGGACAAGCTGGATGGCATCTAAAGAAGACGAGTTTCCTGGATTAGCTTACGCAGCTACTCCAAACGGATGGATGAATACTGAGACATTCACCAATTATTTCGAGCGCCAATGA
- Protein Sequence
- MARTYVKKRQAPAYSKASLDAAIDAIKGKRMTVSQAARCYVIPRSTLQKRVNGQRGVKSTTGGRPTAIPINVEAQIASCIKTMEKWGFGLSKTEVLQAIARYLIENNVPNPFKHSLPGDEYFYNFKKRHGLSQKKAQSVEVARKRNVDPFRMDNYFQLLEKVTHGVPPNRIYNVDESSFCLDPTRVKIVGEKGRAAHRVTAGPAKENITVLMGGNAVGGKLPPLIVFKANNVWTSWMASKEDEFPGLAYAATPNGWMNTETFTNYFERQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01471298;
- 90% Identity
- -
- 80% Identity
- -