Trut025008.1
Basic Information
- Insect
- Toxorhynchites rutilus
- Gene Symbol
- -
- Assembly
- GCA_029784135.1
- Location
- CM056648.1:207207147-207208019[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.9e-17 4.3e-14 53.6 0.0 2 45 68 112 67 112 0.95
Sequence Information
- Coding Sequence
- ATGGTGAATAGTTACAGTTCGTCTAATATCTCGACGCCTACGTCACCCCAGGGAGGCAACGAGACAGCAGCGGCGGCAGCAATGGTTCACAGTGTGTATAGCCAAGGTACGAATGCAAATCAGTCACCAATTGGAACTACCAGTGCGAGCGGGACAACCATACAACCAGTGAAACGGAAAAGATCCGTCAATCCACAGGGTGACGAGAACTTCCTGCGAGCGCTTGAAGCGGTTCGTTTTGGCGGTATTGGCTTCTGCAAAGCTGCTCGACTGTATGGTGTGAATAACCGAACTCTCTGGCTTGAGTATAAGAAACGAGGTTATCCAATCAGCAGACCTAGCATAAAAAGTCGGATAAAGCTTGAACCGAACATTTCACCGCCTCCGTCGACAACGCCGACTGGTGACGAGAATGCTTCGATGGAGCACTACGATACGTCCCTGTCTTCGCCTGCTTTGAATATGTCCctgcagcagcatcagcaacagcagcagcaacaacaacagcagcaggcGCAACAACAAGCACAAGCAGCCCAGCAACAACAGGCCgcccagcagcaacagcaacagcagcaagcaCAGCAGCAGCAAACGCAGCATCAGACGGCGAACGAGAATGCAAATGCCGCGGCAGCTGCAGCAGCGGCTGCGGCCGCAGTGGCAGCTTCATCGGCCGCTCCGCTGATGTGTCCCCCGCACGCACATCCTATGGGCGTGATGGGCTTCCTCGATACACGCCATGTAGACTTCACAACGGCAGCGGCCGCCGGAATCCACCAAATGTCTCGTCAGCGATATCCGGATACCACCACTGTAAATATGAACACGGGAGCAGTTAATCTGCAAGGTTTAAACTTTAATTCCATGTAA
- Protein Sequence
- MVNSYSSSNISTPTSPQGGNETAAAAAMVHSVYSQGTNANQSPIGTTSASGTTIQPVKRKRSVNPQGDENFLRALEAVRFGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKSRIKLEPNISPPPSTTPTGDENASMEHYDTSLSSPALNMSLQQHQQQQQQQQQQQAQQQAQAAQQQQAAQQQQQQQQAQQQQTQHQTANENANAAAAAAAAAAAVAASSAAPLMCPPHAHPMGVMGFLDTRHVDFTTAAAAGIHQMSRQRYPDTTTVNMNTGAVNLQGLNFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01461806;
- 90% Identity
- iTF_01524610;
- 80% Identity
- -