Tmul010465.1
Basic Information
- Insect
- Toxonevra muliebris
- Gene Symbol
- zfh1
- Assembly
- GCA_963691655.1
- Location
- OY829327.1:35062348-35068327[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0001 0.008 17.2 0.8 1 23 202 224 202 224 0.95 2 15 0.0011 0.09 13.9 0.4 3 23 232 252 231 252 0.98 3 15 0.00079 0.063 14.4 0.1 1 23 408 430 408 430 0.97 4 15 0.0022 0.18 13.0 1.0 1 23 436 458 436 459 0.96 5 15 0.00018 0.014 16.4 3.2 1 23 488 510 488 511 0.95 6 15 0.013 1 10.6 0.3 1 23 534 556 534 556 0.94 7 15 0.014 1.1 10.5 2.1 1 23 562 585 562 585 0.97 8 15 0.4 32 5.9 0.3 5 19 596 610 593 611 0.91 9 15 0.00024 0.019 16.0 5.6 1 23 620 642 620 642 0.97 10 15 0.092 7.3 7.9 1.3 3 23 649 669 647 669 0.96 11 15 1.4e-05 0.0011 19.9 1.0 1 23 678 700 678 700 0.98 12 15 0.007 0.56 11.4 0.2 3 23 708 728 706 728 0.97 13 15 0.00022 0.018 16.1 0.3 1 23 734 756 734 757 0.95 14 15 0.084 6.7 8.0 0.1 1 23 767 789 767 789 0.96 15 15 0.068 5.4 8.3 0.0 1 20 1367 1386 1367 1389 0.93
Sequence Information
- Coding Sequence
- ATGGATGGGCAATCGTATGGAATTCAATGGATACAGCATGACATGAAAACAGCTGGTCAAATGATTATAGATGCACAGCCACCGCATGAGGAAGATATTTTGGCGAGTAGTGGTGACACCGATGATGGTGTGCAATATTTGGTAGATGATGATGAGCACGATGGAAATGTACATGTGCGGGCCACGGCGGCCGACATTGATCAAATTGCCGCTGAGAATCTTATATTTATGGCAAGAGATGGTCAAATGGTCACCGAGATAATAGGCACTGATGAAAACGGTGCTGTTGTGGTATCGGCCAGCGATGGTACCACAATAGATTGTGAAGCTGTGATGCAACAAGCTGCAGATATGTCATCGAATGACGCGACCGAACAACATGATGATGCGGGAGGTGGTGGTTGCGAGTATTCAGAAGAGTATACGGAGACTACACCCCAAATGGTTACAGAAGAAGTGATTACAGATGATTGGGTGCAGCATCAGGGTGAAGAACGtGTGGAAATTCCAGCGGAGCAAATAATTGGTTCAAATTCACACGTTCTTCTGGATATTGAAGTACCACTCCCCACTATGCAGGATGAGTACACTGCGCTGCGTCCTTATCCTTGCGACTTTTGCAGTCGTCGCTTTCGTAAGAAGGCTAGTCTCAACAATCACATGGTGGCACATCAACATGATCGTCCAAATCTTTGTAAATTATGTGGTGCGCGCTTTTTTCGACGTGGCGATTTGATAAATCATTTGAAGGCGCATGCCGAGGCACCCGAAGTTGATGGAGATTTTATAAGTTTTGTGGAACGAGAACATCATCAACAGCGTCATCATCATGCCAACGATCATTACTACGATCAAGATTGGAGCGTTAATACTGATGCAATTACAGGTGGTTATCATCATCCCGGTAAATCTAGTCGTAAATCTCATAATGCCAGTGGTAACAGCTCATCTACGTCAACATCTACGACTGTGGCACGTCGTGGACGTATTAGTCGTCTTAAGCCGAAAGAGGAGAACTATACGATTAATGAATCCCTCGTGCAGTCTCATTCGCACTCTAATCAACAGCAGCAGTGCGAGCAGTATGCTAACGTCGCAAGCGATATGGACTATGTTGAAGAGTGCCAAGAGTTGCAGGCTTCAACAGCAGCTGTTAAACTTTCACAGGATCATTCACCTGCGCATCAGCGACATTATCCGATTATAGACGATAGCAAACCGTTTGTGTGTCAGCAGTGCGGTTTGGCGTTTGCACGAGAGAAAGCTTTGCTGTCGCATgctaaaAATCATCGCAACGATTCACCCTACGAATGCAaccaatgcaatgaagtgtttTGGGATACTGCCACACTGCAGGAACACCAAAAATCACATCACTTTGAAGAGAGCAATTCGGAGTACGACCCCGAAGAGGCCGAAGATACCCAAAGTGAATCTGAATCTGAACGTTTGTATGGCGAGTTTTATTGTAGCGAGTGCGGCATGTCATTTCATCGGCAGGATGTTTTGCGTAGACATGCACGTGCCCATCACAAAACTACTACTGCAGATGCAGTAACGACAGCAACCGGCGTAGAAGTGGACAACACTCATGATCAGCATTGCTGCAATACTTGCGGCGAAACATTTGCCGAAGCTTTAGATTTATTGGCGCATGCAGAAATTCATGCACGCTACCCACCTTTCAAATGTGTTCTATGCGGTGAAACCTTCTTTGAAGAACACACCATCAAACGGCATTTACAGAGTCAGCATGTTGGCGAAATGACACAAAACTCGTGCATCCTTTGCGGTAAAGAATGTCGCGATCGCAAGGCATTGATTAAACATGCTTGGGATCATTCGCGCGAGAAATGCCACTCTTGTTCGAAATGTGGCAAGAACTTCCATAATAAAGCACGTCTCAAGCGCCACATGGCATCACATCGCGACAAATCGGTTATTTGTGATGTCTGCCATGAGGAGTTCCCCGATGGTCGCACGCTCTCGAATCACCGGCACTCACACAGCGCAACCGCTTCTGGAAAGCTGTTTCCTTGTCATGAGTGTGGTAAAACTTTTGGTTCACGCAGTTCGCAACAGATTCATGTCCGCATACACACCGGTGAGCGTCCGTATGGTTGCCGTTTCTGCTGGAAGGCATTCGCCGATGGTGGCACAttgcgcaagcatgaacgcatACATACGGGCGAAAAACCATATGCATGTGCAGTGTGCCCGCGTGCCTTCAATCAACGTGTTGTGCTGCGTGAGCATATACGTTCACATCATTCTGGCTTGGATGCTAAACGTGGCACATACTTTTGTACGGTTTGCACTGCAGATTTGTCATCGTCTAACGATTTAATTCAACATTTAATACAACACAGTGACATGAATACTGCCATGCAGAGACAACCAGTTACTGGCCCGCGTAAATATAAACGTCGTAGAAAGCTGAAGCCACATGAGATTGCACGTTTACGCAGCGAAGGTCAACAGAATGGCAGTGACATTGATATATCAGATTTCGATATGGATACCGTAGATGACTTGTTAGGAATAGGAGTAACAACATCAAATACTAATAGTACAACAAATTGTAAAAGTAATATGAAAAGTGCTGGAGGAGATGCTGTTAGAAATAACcccaataacaataataataataataacagccaCAACAACAGTGGCAAACGATCTAccgaagaagatgaagaagatgagaacgatgacgacgatgagGTAGCAAGAGATGCAGGTACAGTTTCTAAAAAGGAGCGTTACAATTCTGCCAGCAGTAATTCAGATAAATTATGGCAAACAAAATTGATAAATTCAAATGATGAGAGTTATAAATCAATGCTATCAAATTTGGAGAATACACTGCAAAGCATTGATACCTTGGTAGTTAGCAGTATTGCCACTAAACATATtgtggaagaaaaaaaatcaagacatagaactaacaacaataataataacgacAATGTGGCTGACAGCAGCAGCACAGCCCAACGCACACAGCAAGTACAAATTATCAAAATGGAAACGAAATACACCGCAGATGTAACGACAACAGCCACGACGTCGTCATCATTATCGACGAAAACGCGAAAAAAGCCTGAAAAGTCGCCAAAATTGACCCGCCCACGTATGATACACACGGAGAAGTCGCGCATTTCCAACTCGGACGGTAGTCGGAAACGCTCGAAAACATTCATTACACGCACTGAACCTGCCAGCATAGAATTGCTTCCGAAATCATCATCCACCACAATGGTTGATGATTATGAGATTATCTCACCCGATACCAAGCCGCCAAATCAAATAAGTTCCAGTCCATTGCATATCAAACAAGAGAATGACCAGCACCAGCAACATTCGCAGCATCAGTCGCATGCACTCTCATCGCGAAATGGCGATTTGTATGATGCGCAATTATTACTCGAAGCCTCGACACTACGTAAGGCggtatatgaaaaattcaatccAAGCATAGTTAATGACTTGGAAGAAATCCTACGTTCGCCTATCAAATCGGATCGTGGTGAACGACATCGCTTTACCAGCGAGTCGTCAAGTCAATATCTTGTCGAGCCCGCAGAAGAGGAACAGCATTTAATTAAGATCGAACCAACCTCACCTGATTTGCGTGAGATTGTTGTCGGTAGTAGCGCGGGCAGAAATAGAaagaataacaacagcagcaactctGCTGAACGTCGTTCTACACGTTCAACACGCAATCGTCTCATCACTGCCAATCGCAAGTATTTAGAATTCGAAACCGATATTACCTCAAATAACACCAAAACAAATGCACCCAGCACAGcgcatcaacagcaacaaaaacgaaatgcGGCGACAACAAGTAAAAGTAAAGCTGTCAAAAATCCGAAGAAGGACaacattaaaactatttcaCCACCAACAGCATTGCCATCATCGCCTTCGAAATCATATTTGAATGATGCTCATGATTCAGTATCACCCTCATCTTCCTTTGCATCAATATCTGCAGTTGTTTCTGCTGCTGATGCAAATGCGGCCGCGGCAGCtgccgccgctgctgctgctggagCGGTATCAACACAACCGGAGCGAAAACAGCGTTATTTCGAATGCGAAATGTGCTCAGCGATATTCCCCGATCGTGCACAATTGCTCGATCATGTGCCCATACATATTTAA
- Protein Sequence
- MDGQSYGIQWIQHDMKTAGQMIIDAQPPHEEDILASSGDTDDGVQYLVDDDEHDGNVHVRATAADIDQIAAENLIFMARDGQMVTEIIGTDENGAVVVSASDGTTIDCEAVMQQAADMSSNDATEQHDDAGGGGCEYSEEYTETTPQMVTEEVITDDWVQHQGEERVEIPAEQIIGSNSHVLLDIEVPLPTMQDEYTALRPYPCDFCSRRFRKKASLNNHMVAHQHDRPNLCKLCGARFFRRGDLINHLKAHAEAPEVDGDFISFVEREHHQQRHHHANDHYYDQDWSVNTDAITGGYHHPGKSSRKSHNASGNSSSTSTSTTVARRGRISRLKPKEENYTINESLVQSHSHSNQQQQCEQYANVASDMDYVEECQELQASTAAVKLSQDHSPAHQRHYPIIDDSKPFVCQQCGLAFAREKALLSHAKNHRNDSPYECNQCNEVFWDTATLQEHQKSHHFEESNSEYDPEEAEDTQSESESERLYGEFYCSECGMSFHRQDVLRRHARAHHKTTTADAVTTATGVEVDNTHDQHCCNTCGETFAEALDLLAHAEIHARYPPFKCVLCGETFFEEHTIKRHLQSQHVGEMTQNSCILCGKECRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVICDVCHEEFPDGRTLSNHRHSHSATASGKLFPCHECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGLDAKRGTYFCTVCTADLSSSNDLIQHLIQHSDMNTAMQRQPVTGPRKYKRRRKLKPHEIARLRSEGQQNGSDIDISDFDMDTVDDLLGIGVTTSNTNSTTNCKSNMKSAGGDAVRNNPNNNNNNNNSHNNSGKRSTEEDEEDENDDDDEVARDAGTVSKKERYNSASSNSDKLWQTKLINSNDESYKSMLSNLENTLQSIDTLVVSSIATKHIVEEKKSRHRTNNNNNNDNVADSSSTAQRTQQVQIIKMETKYTADVTTTATTSSSLSTKTRKKPEKSPKLTRPRMIHTEKSRISNSDGSRKRSKTFITRTEPASIELLPKSSSTTMVDDYEIISPDTKPPNQISSSPLHIKQENDQHQQHSQHQSHALSSRNGDLYDAQLLLEASTLRKAVYEKFNPSIVNDLEEILRSPIKSDRGERHRFTSESSSQYLVEPAEEEQHLIKIEPTSPDLREIVVGSSAGRNRKNNNSSNSAERRSTRSTRNRLITANRKYLEFETDITSNNTKTNAPSTAHQQQQKRNAATTSKSKAVKNPKKDNIKTISPPTALPSSPSKSYLNDAHDSVSPSSSFASISAVVSAADANAAAAAAAAAAAGAVSTQPERKQRYFECEMCSAIFPDRAQLLDHVPIHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01133120;
- 90% Identity
- -
- 80% Identity
- -