Pscu006380.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Palloptera scutellata
Gene Symbol
zfh1
Assembly
GCA_958295655.1
Location
OY282450.1:15751197-15756669[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.00015 0.0076 16.6 1.4 1 23 202 224 202 224 0.95
2 15 0.0059 0.3 11.6 0.8 3 23 232 252 231 252 0.97
3 15 0.00078 0.039 14.4 0.1 1 23 408 430 408 430 0.97
4 15 0.025 1.3 9.6 2.8 1 23 436 458 436 459 0.95
5 15 0.00017 0.0084 16.5 4.3 1 23 488 510 488 511 0.95
6 15 0.012 0.62 10.6 0.3 1 23 535 557 535 557 0.94
7 15 0.013 0.67 10.5 2.1 1 23 563 586 563 586 0.97
8 15 0.4 20 5.9 0.3 5 19 597 611 594 612 0.91
9 15 0.00023 0.012 16.0 5.6 1 23 621 643 621 643 0.97
10 15 0.1 5 7.7 1.6 2 23 649 670 648 670 0.96
11 15 1.4e-05 0.00068 19.9 1.0 1 23 679 701 679 701 0.98
12 15 0.0069 0.35 11.4 0.2 3 23 709 729 707 729 0.97
13 15 0.00022 0.011 16.1 0.3 1 23 735 757 735 758 0.95
14 15 0.083 4.1 8.0 0.1 1 23 768 790 768 790 0.96
15 15 0.051 2.5 8.7 0.0 1 20 1374 1393 1374 1396 0.93

Sequence Information

Coding Sequence
ATGAATGGACAATCGTATGGAATTCAATGGATACAACATGACATGAAAACAGCTGGTCAAATGATTGTAGATCCGCAACCACCGCATGAGGAAGATATTTTGGCAAGTAGTGGTGACACCGATGATGGTGTGCAATATCTGGTGGATGACGACGAGCATAATGGAAATGTACATGTACGCACCACATCGGCCGATATCGATCAAATTGCCGCGGAGAATCTTATCTTTATGGCAAGAGATGGCCAAATGGTCACCGAGATAATAGGCACGGATGAAAACGGTGCTGTTGTAGTATCGGCCAGCGATGGTACCGCCATAGATTGTGAAGCGGTGATGCAACAAGCTGCTGAAATGTCATCGCATAATATATCGCTACAACATGAGGATAGTGGAGAAGGAGGTTGCGATTACACGGAAGAATATACGGAAACAACACCTCAAATGGTTACAGAAGAAGTGATAACAGATGATTGGGTGCAACATCAGGGCGAGGAACGtgtggaaatttcagcagacCAAATAATTGGTTCAAGCTCACAAGTTCTTTTGGATATTGAAGTTCCACTTCCCACTATGCAGGATGAATACACAGCTCTACGTCCTTATCCCTGTGACTTTTGCAGTCGCCGTTTCCGCAAAAAGACTAGTCTGAATAATCACATGGTGGCACATCAGCATGATCGACCAAATCTTTGCAAATTGTGTGGTTCACGATTTTTTCGACGTGGCGATTTGCTAAATCATTTGAAAGCTCATGCGGAAGTTGATGCAGAGCCAGATATAAGTTTTGTAGAACGTGAACATCACCAACAGCGTCATCATCATGCCAATGATCATTACTACGATCAAGATTGGACCGTTAATACCGATGCCATTTCAGGTGGTTATCATCATAGCAGTAAACCTAATCGTAAATCTCATAATGCCAGTGGTAATAGTTCATCTACGTCAACCTCAACGACAGTGGCGCGTCGTGGGCGCATTAGTCGTCTTAAGCCTAAAGAGGAGAACTATACGATTAATGAAACACTTGCACAGTCGCATTcccatcaacaacagcagcagcagcagcagtgcgAGCAGTACGCTAATGTAGCGGGCGACATTGACTATGTTGAAGAGTGCCAAGAGTTGCAGgcttcaactgctgctgttaaACTGACACAGGATCATTCACCTGCGCATCAGCGTCATTATCCGATCATAGACGATAGTAAACCGTTTGTGTGTCAGCAGTGCGGTTTGGCATTTGCTCGTGAGAAGGCTTTGTTATCGCATGCAAAGAATCATCGCAACGATTTACCTCACGAATGCAATCAATGCAATGAAATGTTTTGGGATACTGCCACATTGCAGGAACACCAAAAATCTCACCATTTCGAAGAAAGCAATTCGGAGTACGATCCCGAAGAGGCCGAAGACACACAAAGTGAATCTGAATCAGAACGTCTGTATGGCGAGTTTTACTGCAGTGAGTGCGGTATGTCATTTCACCGGCAGGATGTATTGCGTAGGCATACGCGTGCCCATCATAAAAATACTGAAGATGCAGATCCAGCAACGGCAGTAGGGAACGTAGAAGTGGACAACAGTCGAGGTCAGCATTGCTGTAATACGTGCGGCGAAACATTTGCTGAAGCTTTAGATTTGTTGGCGCATGCGGAGATACATGCGAGATATCCACCTTTCAAATGTGTTCTATGTGGCGAGACGTTCTTTGAAGAACATACCATCAAGCGGCACTTACAAAGTCAGCATGCTGGCGAAATGACGCAAAATTCGTGCATCCTCTGCGGTAAAGAATGCCGCGATCGCAAGGCACTGATTAAACATGCTTGGGATCATTCGCGCGAGAAATGTCACTCTTGCTCGAAATGTGGCaagaattttcataataaagcGCGTCTCAAGCGCCATATGGCCTCGCATCGTGACAAATCGGTTATGTGCGATGTCTGCCATGAGGAGTTTCCCGATGGTCGCACACTCTCAAATCACCGGCATTCGCACAGTGCCACCGCCTCTGGGAAGCTTTTTCCTTGTCATGAGTGTGGTAAAACGTTTGGTTCACGCAGTTCACAACAGATTCATGTACGTATACACACCGGTGAGCGTCCGTATGGTTGCCGTTTCTGCTGGAAGGCATTCGCCGATGGTGGGACGCTTCGTAAACATGAGCGCATACATACGGGCGAGAAACCATATGCATGTGCTGTGTGCCCCCGTGCCTTCAATCAACGCGTTGTACTCCGTGAGCATATACGTTCGCATCATTCTGGCTTGGATGCGAAACgtggtacatatttttgtacggTTTGCACTGCAGATTTGTCATCGTCCAACGATTTGATTCAACATCTTATACAACATAGTGATATGAATACTGCCATGCAGAGACAACCAGTTACTGGACCACGCAAATATAAACGTCGTCGAAAGTTGAAGCCACATGAGATTGCACACTTACGTAGCGAAGGTCAACAAAATGGCAGTGATATTGATATATCCGATTTCGATATAGATACTGTGGATGACTTGTTgggaattacaacaacaaatagtacaataaatggaaaaagtaataagaaaagCGCTGGAGCAGATGGTGCTGGCacttctaataataataataacaacaccaGCCACAACAACAGCGGTAAACGATCTACCGAAGAAGGTGAAAATGACGAGGATGTTGAAGACGATGGGGTAGACAGAAATGGTGGTGCGGTTTCAAATAAGGCGCGATACAATTCCGCCAGCAGCAATTCAGATAAAATATGGCaaacaaaattgataaattcaaatgATGAGACTTACAAATCAATGCTATCAAATTTGGAGAACACGCTACAAAGTATTGATACCCTCGTGGTTAGCAGCAGTGCCACGACAAAAACTGTTATAGGAGATAAAAAATCAAGACATAGaactaacaacaataataatattaacgaTAATGTGACTGACAGAAGCAGCACGGCACAACGCACACAACAagtacaaattattaaaatggaaACGAAATACGCCACAGACACTGTAGCGACAActgcaacaactgcaacaacatcGTTGTCATCGTCGACGAAAACGCGCAAAAAACCTGAGAAGTCAATAAAATTGACCCACCCACGTATGATACACACGGAGAAGTCGCGCATCGCCAGCTCGGATGGCAGTCGGAAACGCTCGAAAACATACATTACACGGACTGAACCTGCCAACATAGAACTGCTTCCGAAATCATCCTCCTCCACAATGGTTGATGATTATGAAATTATCTCGCCAGATACCAAGCCACCAAATCAAATAAGCTCCAGTCCATTGCACATCAAGCAAGAAAATGAGCAACATCTGCAACAtctgcaacagcagcaccatcaCTCGCATACGCTCTCTTCGCGCAATGGCGATTTATATGATGCACAGTTGCTGTTGGAAGCCTCGACACTACGTAAGGCGGCATATGAAAAATTCAATCCGAGCATAGTCAATGACTTGGAAGAAATCCTACGTTCGCCTATTAAATCGGATCGTGGTGAAAGACTTCGCTTTACCAGCGAGTCGTCCAGTCAATTTCTCGTCGAGCCTGCGGAAGAGGAGCAGCATTTAATAAAGATCGAACCAATCTCGCCCGATTTACAAGAGATTGTTGTCGGTAACAGCACGGgtaacagtagcaacaacaacaagctgaACACAGCTGAACGCCGTTCTACACGTTCGACACGCAGTCGTCTCATTACTGCCAATCGCAAGTATTTAGAATTCGAAACCGATATTACCTCGAACAacatgaaaacaaatgcaatcgGCACatcacatcaacaacaacataaacgcAATGCGGCGATAACAAGTAAAAGTAAAGCTGTCAAAATTCAGAAGAAAGACAACAATGCAACCATTTCACCACCAACAGCATTATCTTCTTCAAAGTTATCATTGCCTTCGAAATCGTATTTGAATGGCGTACATGTTCCTGTATCGCCATCATCATCCTTTGCATCGATATCTGCGGTTGTCTCTGCAGCTGATGCAAATGCTGCCGCGACagctgccgccgctgctgcGGCTGGAGCGGTGTCAACGCAACCGGAGCGAAAACAACGTTACTACGAATGCGAAATGTGTTCAGCGATATTCCCAGATCGAGCACAATTGCTCGATCATGTGCCCATACATATTTAG
Protein Sequence
MNGQSYGIQWIQHDMKTAGQMIVDPQPPHEEDILASSGDTDDGVQYLVDDDEHNGNVHVRTTSADIDQIAAENLIFMARDGQMVTEIIGTDENGAVVVSASDGTAIDCEAVMQQAAEMSSHNISLQHEDSGEGGCDYTEEYTETTPQMVTEEVITDDWVQHQGEERVEISADQIIGSSSQVLLDIEVPLPTMQDEYTALRPYPCDFCSRRFRKKTSLNNHMVAHQHDRPNLCKLCGSRFFRRGDLLNHLKAHAEVDAEPDISFVEREHHQQRHHHANDHYYDQDWTVNTDAISGGYHHSSKPNRKSHNASGNSSSTSTSTTVARRGRISRLKPKEENYTINETLAQSHSHQQQQQQQQCEQYANVAGDIDYVEECQELQASTAAVKLTQDHSPAHQRHYPIIDDSKPFVCQQCGLAFAREKALLSHAKNHRNDLPHECNQCNEMFWDTATLQEHQKSHHFEESNSEYDPEEAEDTQSESESERLYGEFYCSECGMSFHRQDVLRRHTRAHHKNTEDADPATAVGNVEVDNSRGQHCCNTCGETFAEALDLLAHAEIHARYPPFKCVLCGETFFEEHTIKRHLQSQHAGEMTQNSCILCGKECRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVMCDVCHEEFPDGRTLSNHRHSHSATASGKLFPCHECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGLDAKRGTYFCTVCTADLSSSNDLIQHLIQHSDMNTAMQRQPVTGPRKYKRRRKLKPHEIAHLRSEGQQNGSDIDISDFDIDTVDDLLGITTTNSTINGKSNKKSAGADGAGTSNNNNNNTSHNNSGKRSTEEGENDEDVEDDGVDRNGGAVSNKARYNSASSNSDKIWQTKLINSNDETYKSMLSNLENTLQSIDTLVVSSSATTKTVIGDKKSRHRTNNNNNINDNVTDRSSTAQRTQQVQIIKMETKYATDTVATTATTATTSLSSSTKTRKKPEKSIKLTHPRMIHTEKSRIASSDGSRKRSKTYITRTEPANIELLPKSSSSTMVDDYEIISPDTKPPNQISSSPLHIKQENEQHLQHLQQQHHHSHTLSSRNGDLYDAQLLLEASTLRKAAYEKFNPSIVNDLEEILRSPIKSDRGERLRFTSESSSQFLVEPAEEEQHLIKIEPISPDLQEIVVGNSTGNSSNNNKLNTAERRSTRSTRSRLITANRKYLEFETDITSNNMKTNAIGTSHQQQHKRNAAITSKSKAVKIQKKDNNATISPPTALSSSKLSLPSKSYLNGVHVPVSPSSSFASISAVVSAADANAAATAAAAAAAGAVSTQPERKQRYYECEMCSAIFPDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01470711;
90% Identity
-
80% Identity
-