Tmul005246.1
Basic Information
- Insect
- Toxonevra muliebris
- Gene Symbol
- -
- Assembly
- GCA_963691655.1
- Location
- OY829326.1:94341442-94348504[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0072 0.58 11.4 1.3 1 23 120 143 120 143 0.96 2 15 0.00073 0.058 14.5 0.5 3 23 150 171 149 171 0.94 3 15 9.2e-05 0.0073 17.3 3.1 3 23 182 203 180 203 0.95 4 15 0.012 0.94 10.7 1.5 2 23 274 296 273 296 0.96 5 15 0.00014 0.011 16.8 3.5 2 23 307 329 306 329 0.96 6 15 0.00042 0.034 15.2 6.8 2 23 506 527 506 527 0.98 7 15 0.00025 0.02 16.0 4.5 1 23 533 556 533 556 0.95 8 15 0.00029 0.023 15.8 1.5 1 23 561 583 561 583 0.97 9 15 4.8e-05 0.0039 18.2 4.0 1 23 593 615 593 615 0.97 10 15 0.00037 0.029 15.4 1.3 1 23 620 642 620 642 0.97 11 15 1.8e-07 1.5e-05 25.8 0.5 1 23 648 670 648 670 0.96 12 15 0.00013 0.011 16.8 0.6 1 23 676 698 676 698 0.98 13 15 1.6e-06 0.00013 22.9 1.7 3 23 706 726 705 726 0.99 14 15 7.3e-07 5.8e-05 23.9 1.7 1 23 732 755 732 755 0.98 15 15 2.4 1.9e+02 3.4 0.2 1 20 760 780 760 784 0.66
Sequence Information
- Coding Sequence
- atggaAATCAATACTAAACTCGATACGGAATCGATTTGTCGAGTTTGTTTACTTCGTAAATCTGAACTATTTTTGATCTTTGACGAGATCCATGCAGAAGAAAATGGAGTAACAATTTCGGAAATACTGACGGAGTGTACAAGATATAAGGTTGGGCGATATGACAATTTGCCACATCAAATTTGTACGGAATGTATGAAAACGGCGCGAGAAGCGTTTCGTTTTAAAAGACAAGTTGAGCTATCATATCGCACCCTAATGGGGTCGTTGGATGAGGCTGAGACGGAGAATCTAAATCATTACCATAAATCGGTGGAATGTGCCGATAAAGGAACACAAGCTGGAAAAAATTCGGTTCATCCGTGCGAAATGTGtgaccaaaaattttttgatgttttcgACTTGCGTGAGCACCGCTATACTGTGCATCGAGGTAATGATAAAATTTGCAAAGTGTGTGGTGAGAAATTTGAGCGTATGCGCCAGTTACGAAGCCACTTGATACAGCAACATCCAGATGAGGGCTTAATACCTAGTATAATATGCAGTTTTTGTATGCGATCATTTTCACGAAAAGAGCATTTAAAACGGCATTTGCGTTCAGTtcacaaacaaaatttggaaaGcaCAAATCTTTCTTTGGAACTGAAAACTCTTTTGAAAATTGATGAGATCAAAAAAGATACTAATGATGACTTCCCTGGTTGGATGAATCGTgcagacgatgatgatgattcgGGAAGGAATGACCCCAGTACGTCTGTTACTGATTTACCTGAAAGAAAAATCACAGCGCCATCGCATCGTGTCGATAACAAACAATGCAAAGTATGTAGTGAGAAATTTGAGAATATGCGTAAGATGCGCAGTCACATGATTAAGGCACATGCAAATGAGGGCATTGTAATTTCGGATATACAGTGCACATTTTGTATGCGATCATTTGCACGAAAGGAACATTTGCGGCGGCATCTGCGTTCAATGCACAATCAAAATATGGAAAGCAACAAAGTTTCATTAGAAGAACcggaaattgatttaaaaattgatgaaaaaagaAAGATCGTTCTACCAGACGGGGTCGATTGTACTGATGGTGACAATGATTCTGATATGGATGATGCCGATATGTTTGCTACTAATCCCATTTCGAGCGATGACGAAGACGAGGCTGATAACTTTAAAGCTTTTGAAATGCGTTTGCCTGTGCTCAAATTAGAACCAGAATTAAGCATAAAAGTTGAGGAAAGTAATGACGCTAACGGCGAGTTCTTTTCACACGATTCAATGGAATATCATCAATCTGACGAggaatctaaaaatatattaaaagagGAGAACGATGATGATTTCATTGATGACACCGGAGTCTCTTCTCCTGAGCCATCCAGACCACGTAAAAAAGCAAATAACGCATGCAGTTTATCCAAACCCAAAGTGGAAATCATACGTGAAACAACAGACGTTAAGCAggttaaaagaagaagaagcaacaaAGCAACAAATCCCGAAAATCGTTGTGATCAATGTCAGCGAACATTTTCTCGTGGTTGCCATTTGACACGTCATATGCTTACTCATCTCGACGAGAAGTTACACGAATGCTCATTTTGTTCGAAACGTTTTGCTCGTAGCGATCATATGAAGAAACACATATTAAATGTTCACAATGAGAAAGATTTCAAATGTGACCAATGTACTTGTGCATTTGCACGTGCCGAAGATCTGGAGCGCCACAAGGTGCGTCATGGCACTGATCCAGATGCGTTTAAAGTTCATAACTGTGAATATTGTGCGAAGAAATTCACAAGCAAAACTTATTTGCGCAAGCACATACTAATGCATACGGATCGGATTTTCGCATGCAAATCTTGCGATGAAACGTTTAAAGAACGTAAACTTCTACGGGAGCACGAAAAGACCCATAGTGCTGGGCGAAATTTCCTTTGCTCCATTTGTGGCGAAAGTTTTGTACGCAATGACTATTTGCGGGTTCATATGCGACGACACAATGGTGAAAAACCATTTAAATGTCAATATTGCGAAAAAGGATTTCCTCGCGCTACCGATGTTAAAATTCATGAAAGaTACCACACCGGTACTAAACCCAATCTTTGCACACTCTGTGGAAAAGGCTTTCATCGCGCCTACAATCTTACAATCCATATGAGAACTCACACCGGTGAACGTCCCTTCAAATGTGATCACTGTGAGAAAGCTTTTGCCCAAAGTAATGATCTAAAATCCCACATACGTCGCATTCATACAGGAGAACGGTACAAATGCAACATTTGTGATGCTGCTGGCTTCTTGCATTTATATGGCTTGCGACAACATGCTTTAATTGCACACAATATACATATTGAATCGCCAACGGGACGGTTGCAAAAGTTTTTGCCTAATCCAGTCCTACCTGAGTCAATGCCTGCGCCTGTGCCTGTGCCATTGCCAGTGCCAGTACCACAGCACATCGCGCCATTTGTGTTTGATCTGAAAAGTTGTCTGCCTCGAGTAGCACAGGAACAGAACGTTGCAGAAGAAGCTAAAATAATTCAACCTGAGCTAATTCCGCTCCAGCAATTTAGGCAAATGccaactcagtcaattactgcGCATTCACCATATGAGACTACGTAA
- Protein Sequence
- MEINTKLDTESICRVCLLRKSELFLIFDEIHAEENGVTISEILTECTRYKVGRYDNLPHQICTECMKTAREAFRFKRQVELSYRTLMGSLDEAETENLNHYHKSVECADKGTQAGKNSVHPCEMCDQKFFDVFDLREHRYTVHRGNDKICKVCGEKFERMRQLRSHLIQQHPDEGLIPSIICSFCMRSFSRKEHLKRHLRSVHKQNLESTNLSLELKTLLKIDEIKKDTNDDFPGWMNRADDDDDSGRNDPSTSVTDLPERKITAPSHRVDNKQCKVCSEKFENMRKMRSHMIKAHANEGIVISDIQCTFCMRSFARKEHLRRHLRSMHNQNMESNKVSLEEPEIDLKIDEKRKIVLPDGVDCTDGDNDSDMDDADMFATNPISSDDEDEADNFKAFEMRLPVLKLEPELSIKVEESNDANGEFFSHDSMEYHQSDEESKNILKEENDDDFIDDTGVSSPEPSRPRKKANNACSLSKPKVEIIRETTDVKQVKRRRSNKATNPENRCDQCQRTFSRGCHLTRHMLTHLDEKLHECSFCSKRFARSDHMKKHILNVHNEKDFKCDQCTCAFARAEDLERHKVRHGTDPDAFKVHNCEYCAKKFTSKTYLRKHILMHTDRIFACKSCDETFKERKLLREHEKTHSAGRNFLCSICGESFVRNDYLRVHMRRHNGEKPFKCQYCEKGFPRATDVKIHERYHTGTKPNLCTLCGKGFHRAYNLTIHMRTHTGERPFKCDHCEKAFAQSNDLKSHIRRIHTGERYKCNICDAAGFLHLYGLRQHALIAHNIHIESPTGRLQKFLPNPVLPESMPAPVPVPLPVPVPQHIAPFVFDLKSCLPRVAQEQNVAEEAKIIQPELIPLQQFRQMPTQSITAHSPYETT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01133071;
- 90% Identity
- -
- 80% Identity
- -