Ttub021466.1
Basic Information
- Insect
- Torymus tubicola
- Gene Symbol
- -
- Assembly
- GCA_035583055.1
- Location
- JAWWEQ010008037.1:4754-14030[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.012 2.5 10.2 0.6 1 23 1027 1050 1027 1050 0.95 2 12 0.00069 0.14 14.1 0.2 2 23 1105 1126 1104 1126 0.97 3 12 0.04 8.4 8.6 2.0 3 22 1260 1279 1259 1279 0.97 4 12 0.99 2.1e+02 4.2 0.5 3 23 1300 1320 1298 1320 0.96 5 12 0.052 11 8.2 0.2 1 20 1398 1417 1398 1419 0.93 6 12 1.2 2.5e+02 3.9 0.3 2 19 1445 1462 1444 1462 0.94 7 12 0.78 1.6e+02 4.5 0.3 1 23 1488 1511 1488 1511 0.96 8 12 0.0093 1.9 10.6 1.2 1 23 1563 1585 1563 1585 0.94 9 12 0.009 1.9 10.6 0.5 3 23 1880 1900 1878 1900 0.95 10 12 0.17 36 6.6 0.5 1 23 2255 2278 2255 2278 0.95 11 12 0.15 32 6.7 0.0 1 23 2288 2313 2288 2313 0.96 12 12 0.00011 0.022 16.7 2.1 1 23 2315 2337 2315 2337 0.98
Sequence Information
- Coding Sequence
- ATGCTTACAAATCAAGAGTCaaataaatcatcaaaaatagTTATTGACACCAAAGACAATGTGAAAGATGTAGAAACAAGTTGCAGACGAACAATACCTTTCGTAGGAAAAATACCTAGAAAGCTTTTATCTACTGTACCTGAAAGGCCTATAGAAGAAAAATCTAGTGAGCAAAGTACTAAGTCAGATTCATTGTCTAATACTACAAATGCAAAGCCTCATGTTTCACCTAGAGATAAACATGCTAAACATGATTTATCGAAAGATGTAAATGCAAAGTCAGAATCTTctgcaaatgaaaatgaaaaaactgatTCTCTAACAGAAGATGGAAAATCAAAGTCAGAATGTTCTATtgacataaaaacaaaatctaaTTTTCCTTTAGAAGAGGCAAAAGCAAATTTAGAATCTTCTACTGTACACAAAATTGCAAAATctgatttttctgaaaaagatATTGATCCAAAACAAGATTCTTCGAAACCTAGTATAAGAATAGTTTCTTCTTCCAAAGATATACCAGATAATCAACTAAGTACTGAATTGAACATGGAAGTAGATTCTTTAagaattacaagaaataaaatatctaatgtTGCATGTACTAAAAGAAAAGATTCACTAAGTACTTCTTGCGAGGGAACAGAAACTAAAACGAATTCATCTGTCGAAAATGAGAAATCTTTGCCAGTTGATAacttaaatttagttaaatctCTAGATAATGGAGACAAAGAAGAAATTTGGAGTTGTCAAAGAACTGAACCTTATGTACGTGAGATCTATCATAATTGTAGTAGAACATTGCCATTTGTACGTCCAGCAGATAAAGTCAAAACTAATGAACCAGGAACTAGTTttgatatacaaaatacattatcatCTGAAATCATTACAAATAGGCTTCATACAAATGACATGAACATTCCAACCGATGAAGAAAATAGTTTAACTGATTCTACTGCTGATGTTGAAGTTAATTTAGACAGTAGCAGTAAATCTGATAATGTGATACACAATGGTCAGTGGAAATTCAGAAGGAAACGTCAATTGGCAAATTCAGATGATGAAAATGAGattGAATCAAACAATCCATCTAAGAAAGCTAAATCAATATCAACAAAATCCACGTCttctccaataaaaaaaataactgccTCAGTCACAAGTCCAGGAAGGACGATCTGTTcactattttcaattaattgtaCAGAACATGCTCATCATCATTATTCAAACAATACTGGATGTCCTATTTCACTTAAAACAAAGGCAGATGTCTACATACTATTaactaaattagaaaatatgacAGATCCTTTAGTACTTGAGTACCTCAAAAAGACTGATTTAACTTACAAAACAAAAGAGGAACCATTATCTCCttcaaaagataattatacAATTGTCGAGTCGAGAACGAGCTTAGGAAGCGTGAAAGAAAGTTCCGATTCTGCGGCCACAAGGAAAAGTGAAACCAAAGATGACTCTATGCATTTACCGGCTGCAGAAACCGAATCGAAACTTCCTGAAGCGCCTACTCAAATTAACGAGGATAACATTCAAGAAAATCAACGAAAGGTAACACGATCCGCGAGAGCTTCCACAGAGTCGCCAATACTCATGCccggaaagagaaagaagcatCCAGTAaattacatagaaaattttagtGATACGGACAGTGATAGATCAGCAAGTTTCTCAAATATTCGGACAAGATCAAAGAGTCGAGGACCAACATTGCGTGATCGTAGTAAACGCAGGACGCATAGTGGTCAAGTTGGAGATGATAACGACAAAGAAGTGGAGGAATTCTCTCGTATCGATGTGAGAAGTCGAACTCATAGCAAGGGAGCAGACGATGTAAATCAGATGGATACCAATGAAGAAAGGCCCCCTGCTaggataacaagagcaaaatcACGCCTTGGATTGAAAATCACAGACACTCCCAATGACATTACAAGTGAAATAACAACACCGATGAGACCGAAAACTCCTAGTGCGAAATTGGTAAACGAGCGACTATTAGAGTCGACTAAGCACGATCTTAGTGCACAGTGTCAAGCCGACGAGGACGAACTTGATAAAGAAATGGAGGAAATTACTCGGAATTGTACGCCATCTGTACCAGAGAGTTTAGGTTCAATTGATGAACCGCTCAATACGCCGGTCCTTAGTCAATCGCAAActgagtataataataatgaccaAACACTTACACCAAAGAGCAAAACCGGATCAACTGTTAGTTCTGGACGAAAATCCAGGGCCTCGAGGGTCGGTGCACTGTCTGTGACGCCGAAAAAGGCCTTGGGTACGCCAGTTCATAGTGAAAGTGTTGCTAATACGTTATCTGACGCTTCCCAACAGTTGGTTAATTCGATTAGACAAAACCTAATAACACAACTAACTTCTCCGAAAACCAGCTTATCTTCAACTAATCAGAAAAATCTGACGATGGGTAATTTGAAGgttcaattaataaaattggaaACTGTTTGTAATAGCTTTAAAGACTATTCAGCCAGTGACATAGAATTGCTTACTAATAAATACGTCGATTTACTAATTACCTCAAACTTTACTAGTGATACTTGGCAAAAGCCAATTAACTACCATCGACCTGTTGAGAATTCTGTAGAACAAATTGACAGTACAAATTGCGTATCTGAAAATGATTCCCAAAACGCAACACAACCTACGTCGCCAGATGTAGTTGCCTCTTCCGCGGCAACTCCAGTTGACAAAAAATCATCACCTGGAAAAACGAAAGATGGGGTTACGAATGAGTCTAGTCAACAGGATCCTTCGTCAGTAACATCATTAGATCAGGTGATCGCAACACTAGTGGATCAACCTGAGTCGATTGAGCAGAGAGATTTCGGCGCCGTAAATATTTCGGAAGCTCTTAATGTTCCATCAAACCACAATGATATTAATATTCACGAGCCAATTGTCGAATTACATGAAGGCGAATCAGTTTCTGACCTTCAGGTGTTATCAACAATTAGTGATAATGAAATAGTAGAAAAGGATCCAAAAACAGTTGTAATCAACGGTACAGTCATGTTTGTGTGTGacatatgtaataaaatatttttgactaaAAGTGTTCTTGCTCaacataaaaaacaacaacataaAGAGGCCGACCAAGTCGATAATAGTAACATGTTATCCGCGGCAGAAACTACTTCAACTCCTGTTCAACCCTGTCAGAAAAAATCTTATTCCAAGGGTAGTTCTTCGGCGAAAAAATCTACTCCCAAGCCTAAATCGAAATTCAGATATTCTGAGAGCTTGAAATGTACAATTTGTTCCGTTATATTTGAGACCAAAGTATTACTATTCGAACATATAATGACCCACAATGAACAGGAGTTACAAGAAGCTTTCAAAAAAGCAAAAGCTAAAGAGAAGCGCAAGTATGCCAATGACGGTACGTCAGAGGATTCGGATAAAGATGCAGAAGAAAGTGCTTTACATGAGGAAAATGATAAtggcaaaaagaaaaacgatgcGAGACAAAGGAAAAGCATAGATAGTGTACGAACTAGCACATCGTCTATGGATGTTGACGACGTGTCGGCAAATGATTCTGCAAGATCTGATGTCGATTTAGTAGTGCCAACTGAACACCAGgTGGTAGATCTCGAAGCCATCAATCAAACACCTACCGATTCCGCTTTCCAGAAAACCATCACAATTTGTTCGTGCCACGCACATGAGACAACGAATCAGGACCTACAAATCGAGATGGTACTGCTCTGTAAGACGTGTAATGTCATATTCCGTCGTCGTGACTGTTTCGAGGTGCACTATCGCACGAGCCCGGAGTGCCGGCGTCGTCGCACGAATAACGAAGTAACGAAAATGCCAAAGCTCTTCTGTAGCGGTTGTCCTTGTGTTCTTGACACACTTATGGATATGCGTTCGCACCTTGAGATGCACGCGAGAAAGAACTGCCAGGGTACTGTGACGTTCATCTGCAACATTTGTAAGGTGGCCTTCTTTGGAGTTGGTGGTATATTTTATTCACACTGGTTTAATCACACCAAATCGCCAAATTTCGTCGCTAGTCGTTACTCTTTTCCAAAATTGTCGGTTGTCTCGGTACTGGAAGATTCTAATGGCTCGATGTCGACAAGTAAGAGTCAGGAAGGATTCTTCTACATTGCCGAGCATGTTTGTCGGCAGTGCAGGCTACCATTCAGTTCAGAACCCGAACTGCAGAAACACAAACTCATTCCTTGCGCCTCGGCGACGTCAGCACTACAACGAGTAGAAGTACCCGAGAGCAATCGCCTTCAGATGATTAAACTTATCTGTGATCTCTGTAAGAAGTACTACATGAGCAAGGAGAACTACGATCGACATTGCGTTGAGCGTAATCACCTAAAGACTCCGATCACCAAATTTTCGCGTCTACCTATAAGCCCTACCGAGCAAGCCTTTATGTGCAGCTTATGCCGCGCAATCAGTAAGTCCCTTGACGAAATGAAGGATCACTGGAAGCGTGTGCACAGTCCCGTCATGGAACTCTATACGTGCAAAACCTGCAACATCTTCCCCGAGAGTCCTCTCACCGATTATAGTTATGACAAATTCGAAAGGCACTGTCGAATGGTACACAAGAGCGAGGTAATCACGTGTCTAGTGTACTACATTCAAGCGCCGTACGTCTGTCACTACTGTAGATTTGGATTCGAGACTGAAAAATCGCTAAAGGAGCACGAGGCGGCACATCAAAAGAAGGTATCTCAACCGACAATGACACTACCACCAATTCCGACGACCCACACTACTACTTTGTGGGTGGCCAATGAGCACGTGGCACCTGACGGTGGAAGGCAAATCCAGCCTGTTTATATAGAGTATCCTAATCTTAATGGGAACGTTAATGAACAAGGTTCTGTGCCATTAACAAATGCAGTACCAAGTACACAATACAACCAGCAGCAATTGCAAATACAAACGACAGATAACTTACACTTCGCTCAAGTTCCGTTTGTTACAAATAACGTTGTACCTCAAGTGGTTCAATCTCTTAACGTGATAAATGACAGTGTAATTAGGAACAATACTGCGACGAATACAACACCTGGacggcaacaacaacaacaacaaaatgtGACGAGGAATCCAGTTGTCGAAGAAATATTAATAGATTCAAGATCGAACAGTCCTGTTTTAGATACTGCCACACCAGCCACTACCTCAAGTGGCAAATCTACTCCACGTAACGAAAATGCTGcATCTCCTCTTACAACGAGAAAGTCCTATATGACAATAGTTAATCCAAATTTCGAATCGATGTTAGGTAATAGCGTCAATGAACAAGCAAACACAAGGAGTCCAATGCCAGATAAAGAGAACGGAACTTCGGATGGTAATGCGACACCTACTAGTTCTGATTCCGTAACGCCTCAACCTTTTGAAGTTGTTCTCGTCACCGATGACATTAGTGAAGGCGAAGGGCCTCCTGCGGAAGATAAGATCGGCGATTCTAGTGCACGAGACAGTGATTCGGCCTCGCCAAGTCAACAAGTGGTGAAGGAGAATAGTGAGACCAAGTCATTTCTGCGAGTGCGTTCGATAGCCGAGCTTCAACGgatgaaaattcatttgtgCGCGGTATGTGGTCAAAGCTTCGATACTCTTCCTGCGTTCGAGCAGCATTCTAAGACACACGAGACTAATGCAAAACCAATGCTTGTGACTCCGCCGATGGTTGCTCCAACAAACAAAAGAGCATCGGGTAGCGTGTCAAGTCCGCTAATCACACAGCTACAGCAGCAATTTTATCGATTACCCAATGGACAAATATCTCCAAATCAAGCtgatttaaataagaGAATGAGTCCATCGATAGCGACCTCTTATcaccaacaacagcagcagcaacaacaacatcaaaAACAACCGAATTATTGGATTCCGTCGTCTAACGGCACAAATGCCAATGGCGTGCCAagtgtgaattataattatGGCATGAACCAGCAGCAGTCTCAACTGACACAACAAAGTCTTCTTCGACAAGCTATAGCCACTAACTATACATCGCCACGTGGACCACCGCCCGCGTACCCCGGCTCTTCGGGCACTATGGTATCTAGTACCTCAGGTTCAATTGTGTCCAGCAGGCCAAGTACCATACAATCCAGTCATCGTAATTTACCAACTAGTTTGGGTTCATTACTAGCGAAGCCAGCAGCCGCTTCAACATTTTCCCAGCAGAGTTTGCCCAGTTTCCAGGAAATCACAAATAATCATCAATCtAGTATGCGCATGCCTTACAATAGTAGGTATATGGGTAATGAAGCTAGTGTGAAATCACCAATGATCTCTGCATTACTGCAGCAGAAGACTCCGCAACTCCCTGGAAAGTCCTATCTTCGACAACAAAGCGACCTAGGAAGCTATGCCAGTAACGGTCGTCAATATTCTGCACCCcagcatcagcaacagcagcagcaacagcagcagcaaaagaTCCTCTACACCTGCAAAATTCCGACGTGTCCTTTCCGTTCAGACAATGTCAACGTCATTCGTACCCACGAGAAGGGCCACTGTATACCATCTTTTACTGCACCCTCCAATCAAATCGGCCAGATGCAACCACCGCAGCcaccgcaacagcagcagcaacgttttCCTGTTAAACACGTGTCGGTGAATCAGATACCTGAAAGACCGCGTCATGGGGTATCGGCCAATCGTTCAGCCATGAACACTTCTGAGAAGCGCTATACTTGTCGCATCTGCCACCTTTCGTTCGGCTTGGACACCGAGTTGGTGGAACACGTAACAACTTTGCACAATACGCCAACTAGTCCAGTATGCTGTTACGTATGTGACTATTGTCCATCTCCCATTCTTTTCGACTCCGAAGAGCTTCTTCGACAGCACATAAGGGTTACTCACAATTACTCGTGTCGCCTGTGTAACAAAAGATACCCATCGCAACGGCATCTAGCAGACCACATGGAAACACATACCTGA
- Protein Sequence
- MLTNQESNKSSKIVIDTKDNVKDVETSCRRTIPFVGKIPRKLLSTVPERPIEEKSSEQSTKSDSLSNTTNAKPHVSPRDKHAKHDLSKDVNAKSESSANENEKTDSLTEDGKSKSECSIDIKTKSNFPLEEAKANLESSTVHKIAKSDFSEKDIDPKQDSSKPSIRIVSSSKDIPDNQLSTELNMEVDSLRITRNKISNVACTKRKDSLSTSCEGTETKTNSSVENEKSLPVDNLNLVKSLDNGDKEEIWSCQRTEPYVREIYHNCSRTLPFVRPADKVKTNEPGTSFDIQNTLSSEIITNRLHTNDMNIPTDEENSLTDSTADVEVNLDSSSKSDNVIHNGQWKFRRKRQLANSDDENEIESNNPSKKAKSISTKSTSSPIKKITASVTSPGRTICSLFSINCTEHAHHHYSNNTGCPISLKTKADVYILLTKLENMTDPLVLEYLKKTDLTYKTKEEPLSPSKDNYTIVESRTSLGSVKESSDSAATRKSETKDDSMHLPAAETESKLPEAPTQINEDNIQENQRKVTRSARASTESPILMPGKRKKHPVNYIENFSDTDSDRSASFSNIRTRSKSRGPTLRDRSKRRTHSGQVGDDNDKEVEEFSRIDVRSRTHSKGADDVNQMDTNEERPPARITRAKSRLGLKITDTPNDITSEITTPMRPKTPSAKLVNERLLESTKHDLSAQCQADEDELDKEMEEITRNCTPSVPESLGSIDEPLNTPVLSQSQTEYNNNDQTLTPKSKTGSTVSSGRKSRASRVGALSVTPKKALGTPVHSESVANTLSDASQQLVNSIRQNLITQLTSPKTSLSSTNQKNLTMGNLKVQLIKLETVCNSFKDYSASDIELLTNKYVDLLITSNFTSDTWQKPINYHRPVENSVEQIDSTNCVSENDSQNATQPTSPDVVASSAATPVDKKSSPGKTKDGVTNESSQQDPSSVTSLDQVIATLVDQPESIEQRDFGAVNISEALNVPSNHNDINIHEPIVELHEGESVSDLQVLSTISDNEIVEKDPKTVVINGTVMFVCDICNKIFLTKSVLAQHKKQQHKEADQVDNSNMLSAAETTSTPVQPCQKKSYSKGSSSAKKSTPKPKSKFRYSESLKCTICSVIFETKVLLFEHIMTHNEQELQEAFKKAKAKEKRKYANDGTSEDSDKDAEESALHEENDNGKKKNDARQRKSIDSVRTSTSSMDVDDVSANDSARSDVDLVVPTEHQVVDLEAINQTPTDSAFQKTITICSCHAHETTNQDLQIEMVLLCKTCNVIFRRRDCFEVHYRTSPECRRRRTNNEVTKMPKLFCSGCPCVLDTLMDMRSHLEMHARKNCQGTVTFICNICKVAFFGVGGIFYSHWFNHTKSPNFVASRYSFPKLSVVSVLEDSNGSMSTSKSQEGFFYIAEHVCRQCRLPFSSEPELQKHKLIPCASATSALQRVEVPESNRLQMIKLICDLCKKYYMSKENYDRHCVERNHLKTPITKFSRLPISPTEQAFMCSLCRAISKSLDEMKDHWKRVHSPVMELYTCKTCNIFPESPLTDYSYDKFERHCRMVHKSEVITCLVYYIQAPYVCHYCRFGFETEKSLKEHEAAHQKKVSQPTMTLPPIPTTHTTTLWVANEHVAPDGGRQIQPVYIEYPNLNGNVNEQGSVPLTNAVPSTQYNQQQLQIQTTDNLHFAQVPFVTNNVVPQVVQSLNVINDSVIRNNTATNTTPGRQQQQQQNVTRNPVVEEILIDSRSNSPVLDTATPATTSSGKSTPRNENAASPLTTRKSYMTIVNPNFESMLGNSVNEQANTRSPMPDKENGTSDGNATPTSSDSVTPQPFEVVLVTDDISEGEGPPAEDKIGDSSARDSDSASPSQQVVKENSETKSFLRVRSIAELQRMKIHLCAVCGQSFDTLPAFEQHSKTHETNAKPMLVTPPMVAPTNKRASGSVSSPLITQLQQQFYRLPNGQISPNQADLNKRMSPSIATSYHQQQQQQQQHQKQPNYWIPSSNGTNANGVPSVNYNYGMNQQQSQLTQQSLLRQAIATNYTSPRGPPPAYPGSSGTMVSSTSGSIVSSRPSTIQSSHRNLPTSLGSLLAKPAAASTFSQQSLPSFQEITNNHQSSMRMPYNSRYMGNEASVKSPMISALLQQKTPQLPGKSYLRQQSDLGSYASNGRQYSAPQHQQQQQQQQQQKILYTCKIPTCPFRSDNVNVIRTHEKGHCIPSFTAPSNQIGQMQPPQPPQQQQQRFPVKHVSVNQIPERPRHGVSANRSAMNTSEKRYTCRICHLSFGLDTELVEHVTTLHNTPTSPVCCYVCDYCPSPILFDSEELLRQHIRVTHNYSCRLCNKRYPSQRHLADHMETHT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01469237;
- 90% Identity
- -
- 80% Identity
- -