Ttex004377.1
Basic Information
- Insect
- Torymus texanus
- Gene Symbol
- -
- Assembly
- GCA_036873485.1
- Location
- JAYJLV010000027.1:13264236-13275853[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00054 0.14 14.6 0.3 2 23 904 925 903 925 0.97 2 11 0.041 11 8.7 2.0 3 22 1059 1078 1058 1078 0.97 3 11 0.6 1.6e+02 5.0 0.6 3 23 1099 1119 1097 1119 0.96 4 11 0.053 14 8.3 0.2 1 20 1197 1216 1197 1218 0.93 5 11 2.6 6.9e+02 3.0 1.4 2 19 1244 1261 1243 1262 0.95 6 11 0.8 2.1e+02 4.6 0.3 1 23 1287 1310 1287 1310 0.96 7 11 0.0095 2.5 10.7 1.2 1 23 1362 1384 1362 1384 0.94 8 11 0.0092 2.4 10.7 0.5 3 23 1688 1708 1686 1708 0.95 9 11 0.11 28 7.4 0.5 1 23 2105 2128 2105 2128 0.96 10 11 0.18 47 6.6 0.1 1 23 2138 2163 2138 2163 0.95 11 11 0.00076 0.2 14.1 3.8 1 23 2165 2187 2165 2187 0.97
Sequence Information
- Coding Sequence
- ATGGAGCAGTCAGAAGAAACAGAACCAAATTTAGAGCATGCTGATATTAAACATGCTCAAAGTACAATACAGGATGAAAATATGCAGAAACCtactacaaagaaaaaatttcgtaACACAGTGTTTGCAACAAAGATGAGAAATCGgcggaaagaagaaaaattaaagaatattgaTTCTGAAGAAGTCTTAACCTCATATAACGGtgataaagaagaaatttgTAGTTGTCAGAGAACTGAACCTTATGTACGTGAAATCTATCGTAATTGTAGTAGAACATTGCCATTTGTACGTCCAACAAATAAAGTCATAACTAATGAACCAGGAACAAGTTTTGATGtacaaaatacattatcacCTGAAATCACTACAAATAGGCTTCATACAAATGACATGAACATTCCAACCGATGAAGAAAATAGTTTAACTGATTCTACTGCTGATGTTGAAGTTAATTTGGACAGTAGCAGTAAATCTGATAATGTGATACATAATGGCCAATGGAAATTCAGAAGGAAACGTCAATTGTCCAATTCAGATGATGAAAATCAGattAAATCAGCCAATCCATCTAAGAAAGCTAAATCAATAACAACAAAATCCATGTCTTctccaaacaaaaaaacaactgCCTCAGTCGCAAGTCCAGGAAGGACTATTTGTTCACTATTTTCAGTGAATTGTACAGAACATGCTCATCAtcattattcaaacaatacTGAATGTCCAATGTCACTTAAAACAAAGGAAGATGTCTACATACTATTaactaaattagaaaatatgacGGATCCTTTAGTACTTGAGTATCTCAAAAAGACTGATTTAACTTACAAAACAAAAGAGGAACCGTTATCTCCTTCAAAAGATAATTATACAATAGTCGAATCGAGAACGAGCTTAGGAAGCGTGAAAGAAAGTGGCGATTCTGCGGCCACAAGGAAAAGTGAAACCAAAGATGACTCTCTGCATTTACCGGCTGCGGAAACCGAATCGAAACTTCCTGACTTGCCTACTCAAATTCACGAGGataatattcaagaaaataaacaGAAGATAACACGATCCGCGAGAGCTTCCACGGAGTCGCCAATACTCCTGCCCGGCAAGAGAAAGAAGCATCCTGTAAATTACATAGAGAATTTCAGCGATACAGACAGTGATAGATCAGCAAGTTTCTCAAATATACGGACAAGATCAAAGAGTCGAGGACCAACATTGCGTGATCGTAGTAAGCGCAGAACGCATAGTGGTCAAGGTGGAGACGATAACGACGAAGAAGTAGAGGAATTCTCTCGCATAGGTTTGAGAAGTCGAAGTCACAGCAAGGGAGCAGACGATGTAAATCAGATGGATACAAATGAAGAAAGACCCCCCGTTAGGATAACGAGAGCAAAATCACGCCTTGGATTGAAAATTGCAGATACTCTCAATGTCAGTACAAGTGAAATAAAAACACTGATGCGATCGAAAACTCCTAGTGCGAATTTGGTAAAGGAGCGACTATTAGAGTCGACTAAAAACGATCTCAGTGTACAGTGTCAAGCCGACGAGGACGAACTTGATAAAGAAATGGAGGAAATCACTCGGAACTGTACACCACCTATGCCAGAGAGTTTAGGTCCAACTGATGAATCGATTAATACGCCGGTCCGTAGCCAATCGCAAACCGAGTATAATAACAATGACCAAACACTTACACCAAAGAGCAAAGCCGGTTCGACGGTTAGTTCTGGGCGAAAGTCCAGGGCCTCGAGGGTCGGTGCACTGTCCGTGACGCCGAAAAAGGCCTCCGATACGACAATTCGAAGCGAAAGCGTTAATAGTACGATATCTGAAGCTTCTCAACTGTTCGTCAATTCGATTAGACAAAACTTGTTGACACAATTAACTTCAACGAAACCCAGCACATCTTCAACTAATCAGAAAAATCTGGCGTTGGGTAATTTGAAGgttcaattaataaaattggaaaCTGTTTGTAAAAGCTTTAAGGATTATTCAGCCAGTGAAATAGAATTGCATACTAATAAATACGTCGATTTACTAATAACCTCAAACTTTACTAGTGATACTTGGCAAAAACCAATTAACTATTATCGACCTATTGAGAATCGTGTGGAACCAATTGACAATGCAAATTGCGTACCTGAAAACGATTCCCAAAATGAAACAAAGCCTGCGTCTCCGAATGAAGTTGCCACTTCCGGGGAAACTCTAGTTGAGGAAGAATCATCACctggaaaatcgaaaaaaggGGTTACGAATGAGTCTAGTCAACAGGATCCTTCGTCATTGACGGCGCTAGATCAATCGATTGCAACATTAGTAGATCAACCTGAGTCAGTTGAGCCGAGAGACTTTGGTGCCGTAAACATTTCGGAAGCTCTTAATGTTCCACCAAGccacaataatattaatattcatgagCCAATCGTCGAGTTACATGAAGGTGAGTCGGTTCCTGAACTTCAGCTAGCATCAACAATAAGTGATACCGAAATGGTAGAAAAGGAACCAAAAACACTTTTAATCAACGGTACAGTTATGGCCGAACAAGCCGATAATAGTGATATTTTATCCGCGGCAGAAACTCCTTCGACTCATGTGCAACCGTGTCAAAAAAAATCTGATTCCAAAGGTAATTCCTCGGCGAAAAAATCTACGCCCAAGTCTAAATCGAAGTTTAGATATTCTGAGAGCTTGAGATGTACAATTTGTTCCGTTATGTTTGAGACCAAAGTATTACTATTCGAACATATAATGACCCACAATGAACAGGAGTTACAAGAAGCTTTCAAAAAAGCAAAGGCTAAAGAAAGGCGCAAGCTTGTCAATGACGGTACGTCAGAGGATTCGGAAAAAGATGTAGAGGAAAGTGCTTTACACGAGGAAGATGATAATGGGAAGAAGAAAAACGATGCAAGACAAAGGAAAAGCATAGATAGTGTACGAACTAGCACATCATCTATGGATGTCGACGAGGTGACGCCAAATAATTCTGCAAGGTCTGATGTCGTTTTAGCAGTGCCAACTGAACACCAGGTGATAGATCTCGAAGCCAGCAATCAAACACCTACCAATTCCACTTTCCAGAAATCCATCGCGATTTGTTCGTGTCACGTGCATGAGACAACGACTCAGGACCTACAAATTGAGATGGTACTGCTCTGTAAGACTTGCAATGTCATATTCCGGCGTCGCGACTGCTTCGAGGTTCACTACCGTACAAGCCCGGAGTGCCGGCGTCGTCGCACCAATAACGAAGTAACGAAAATGCCAAAGCTCTTCTGTAGTGGTTGTCCCTGCGTTCTCAACACACTCATGGATATGCGCTCGCATCTTGAGATGCACGCGAGAACGAACTGCCAGGGTACTGTGACGTTCATCTGCAACATCTGCAAGGTGGCCTTCTTCGGAGTTGGcggtattttttattcacactGGTTTAATCACACCAAATCGCCGAATTTCGTCGCTAGTCGTTACTCTTTTCCAAAATTGTCGGTTGTCTCGGTACTGGAAGATTCTAATGGCTCGATGTCGACAAGTAAGAGTCAGGAAGGATTCTTCTATATTGCCGAGCACGTTTGTCGGCAGTGCAGGCTACCATTCAGTTCAGAACCGGAACTGCAGAAACACAAACTCATTCCTTGCGCCTCGGCGACATCAACAGTACCTCGAATAGAAGTACCCGAAATCAATCGCCTTCAGATGATTAAACTTATCTGTGATCTGTGTAAGAAGTACTACATGAGCAAGGAGAACTATGATCGACATTGCATTGAGCGTAATCACCTAAAGACTCCGATCACCAAATTCTCGCGTTTGCCTATAAGCCCTACCGAGCAAGCCTTTATGTGCAGCTTATGCCGCGCCATCAGCAAGTCCCTTGATGAGATGAAGGATCACTGGAAGCGTGTACACAGTCCCGTCATGGAACTCTACACGTGCAAAACCTGCAACATCTTCCCAGAGAGTCCTCTCACCGAATATAGTTATGATAAATTCGAAAGGCACTGCCGACTGATACACAAGAGCGAGGTGATCACATGTCTGGTATACTATATCCAAGCACCGTACGTCTGTCACTACTGCAGATTTGGATTCGAGACTGAAAAATCGCTGAAGGAGCACGAGGCGGCACATCAAAAGAAGGTATCTCAATCGACAATGGCCCTACCACCGATTCCGACACCGATGGTTCCTACGACCCACACTACGACTCTGTGGGTGGCCGACGAGCAAGTGACGCCTGACGGCGGAAGGCAAATTCAGCCCGTTTATATACAGTATCCTAATATTAATGGAAACGTTAATGCACAAGGTTCTGTACCATTGACAAATgTACGAAACACGCAATTCGACCAGCAACCATTACAAATACAAACGACAGATAACGCAAACTTCGGCAAAGTTACGCTTGCATCAAATAACGTCATACCTCAAGTGGTCCAATCTCTTAACGTAATGAGTGACAGTGCAACTGGAAACAATACTGCGACAAATGCAACACCTGAacggcaacaacaacaacaacaacaacatcaacaacaaaatATGACGAGGAATCCAGTTGTCgaagaaatattaatagattCAAGATCGAACAGCCCTGTTTTAGATACTGCCACACCAGCCACTACCTCAAGCGGCAAATCTACTCCACGTAACGAAAATGCCGCGTCTCCTCTTACAACGAGAAAGTCCTATATGACAATGGTTAATCCAAACTTCGAATCGATGTTAGGTAACAGCATCAATGAACAAGCAAATGCAAGGAGTCCAATGCCAGATAAGGAGAACGGAACTTCGGATGGTAATGCGACACCTACTAGCTCAGAGTCCGTCACGCCTCAACCTTTTGAAGTTGTTCTCGTCACCGATGACATTAGCGAAGGCGAAGGACCTCCTGCGGAAGATAAGATTGGCGACTCTAGTGCACGAGACAGTGATTCGACCTCGCCAAGTCAACAAAGAACCAAGGATATTGGAGAGACGAAGTCATTTCTGCGGGTACGCTCGATAGCCGAACTTCAGCGGATGAAAATTCACCTGTGCGCGGTGTGTGGCCAAAGCTTCGATACTCTTCCCGCATTTGAGCAGCACTCTAAGACACATGAGGCCGGTGCAAAACCAAAGCGCATGACCCCGCCGATGGTCGCTCCAACAAACAGAAGATCGTCGGGTAGTGTGTCAAGTCCGCTCATCACACAGCTACAACAGCAGTTTCATCGATTACCTAACGGACAATTATCTCCAAATCAAGCtgatttaaataagaGAATGAGCCCATCGATAGTACCCTCCTatcaccaacagcagcagcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaactacaacaacaacaactacaacaacaactacaacaacaacagcaacaacagcaacaacagcaacaacaacaacagcagcagcagcagcaacaaccgcAACAACCGAATTATTGGTTTCCGCCATCTAACAGCACGAATAGCAATGGCATGCCGAGCATGAATTATAATTACGGCATGAGCCAGCAGCAGCCTCAACTGACACAGCAAAGTCTTCTTCGACAGGCTATAGCCACTAACTATGCATCGCCACGTGGACCACCGCCCGCGTATCCCAGCTCTTCGGGCACTATGGTATCTAGTACCTCAGGTTCAATCGTGTCTAGCAGGCCAAGTACCGTACAATCCAGTCAGCGTAACTTGCCAACTAATTTGGGTTCATTACTATCGAAGCCAACGGCCCCTTCAACATTATCCCAGCAGAGTCTGCCCAGTTTCCAGGAAATCACAAACAATCATCAATCTAGTATGCGCATGCCTTACAATAGTAGGTATATGGGTAATGAAGCTAGTATGAAATCACCAATGATTTCCGCATTACTGCAGCAGAAAACTCCGCAAATCACTGGAAAGTCTTACCTTCGGCAACAAAGCGACCTAGGAAGCTACAGCAGTAACGGCCCTCAATATTCTGCAcctcagcaacagcaacagcaaaaGATTCTTTACACTTGCAAAATTCCGACGTGTCCTTTCCGTTCGGAAAGTGTCAACGTCATTCGTGCCCACGAGAAGGGCCACTGTTTACCATCTTTTACTGCGCCCCCCAATCAAATGGGTCAGATGCAACCACCGCAGCcaccgcaacagcagcagcaacgtcttCCTGTTAAACACGTGTCGGTGAATCAGATACCCGAAAGACCGCGTCATGCGATATCGTCCAATCGTTCAGTCATGAACACTTCTGAAAAGCGCTATACTTGTCGCATCTGTCACCTTTCGTTTGGCATGGACACCGAGTTGGTGGAACACGTAACAACTTTGCACAATTCGCCGACTAGTCCGGTGTGCTGTTACGTGTGCGACTACTGTCCATCACCAATTCTTTTCGAATCCGAAGAGTTTCTGCGGCAGCACATGAGGATCGCTCACAATCACTCGTGTCGCCTGTGTAACAAAAGATACCCATCGCAACGGCATCTAGCAGAACACATGGAGACACATACCTGA
- Protein Sequence
- MEQSEETEPNLEHADIKHAQSTIQDENMQKPTTKKKFRNTVFATKMRNRRKEEKLKNIDSEEVLTSYNGDKEEICSCQRTEPYVREIYRNCSRTLPFVRPTNKVITNEPGTSFDVQNTLSPEITTNRLHTNDMNIPTDEENSLTDSTADVEVNLDSSSKSDNVIHNGQWKFRRKRQLSNSDDENQIKSANPSKKAKSITTKSMSSPNKKTTASVASPGRTICSLFSVNCTEHAHHHYSNNTECPMSLKTKEDVYILLTKLENMTDPLVLEYLKKTDLTYKTKEEPLSPSKDNYTIVESRTSLGSVKESGDSAATRKSETKDDSLHLPAAETESKLPDLPTQIHEDNIQENKQKITRSARASTESPILLPGKRKKHPVNYIENFSDTDSDRSASFSNIRTRSKSRGPTLRDRSKRRTHSGQGGDDNDEEVEEFSRIGLRSRSHSKGADDVNQMDTNEERPPVRITRAKSRLGLKIADTLNVSTSEIKTLMRSKTPSANLVKERLLESTKNDLSVQCQADEDELDKEMEEITRNCTPPMPESLGPTDESINTPVRSQSQTEYNNNDQTLTPKSKAGSTVSSGRKSRASRVGALSVTPKKASDTTIRSESVNSTISEASQLFVNSIRQNLLTQLTSTKPSTSSTNQKNLALGNLKVQLIKLETVCKSFKDYSASEIELHTNKYVDLLITSNFTSDTWQKPINYYRPIENRVEPIDNANCVPENDSQNETKPASPNEVATSGETLVEEESSPGKSKKGVTNESSQQDPSSLTALDQSIATLVDQPESVEPRDFGAVNISEALNVPPSHNNINIHEPIVELHEGESVPELQLASTISDTEMVEKEPKTLLINGTVMAEQADNSDILSAAETPSTHVQPCQKKSDSKGNSSAKKSTPKSKSKFRYSESLRCTICSVMFETKVLLFEHIMTHNEQELQEAFKKAKAKERRKLVNDGTSEDSEKDVEESALHEEDDNGKKKNDARQRKSIDSVRTSTSSMDVDEVTPNNSARSDVVLAVPTEHQVIDLEASNQTPTNSTFQKSIAICSCHVHETTTQDLQIEMVLLCKTCNVIFRRRDCFEVHYRTSPECRRRRTNNEVTKMPKLFCSGCPCVLNTLMDMRSHLEMHARTNCQGTVTFICNICKVAFFGVGGIFYSHWFNHTKSPNFVASRYSFPKLSVVSVLEDSNGSMSTSKSQEGFFYIAEHVCRQCRLPFSSEPELQKHKLIPCASATSTVPRIEVPEINRLQMIKLICDLCKKYYMSKENYDRHCIERNHLKTPITKFSRLPISPTEQAFMCSLCRAISKSLDEMKDHWKRVHSPVMELYTCKTCNIFPESPLTEYSYDKFERHCRLIHKSEVITCLVYYIQAPYVCHYCRFGFETEKSLKEHEAAHQKKVSQSTMALPPIPTPMVPTTHTTTLWVADEQVTPDGGRQIQPVYIQYPNINGNVNAQGSVPLTNVRNTQFDQQPLQIQTTDNANFGKVTLASNNVIPQVVQSLNVMSDSATGNNTATNATPERQQQQQQQHQQQNMTRNPVVEEILIDSRSNSPVLDTATPATTSSGKSTPRNENAASPLTTRKSYMTMVNPNFESMLGNSINEQANARSPMPDKENGTSDGNATPTSSESVTPQPFEVVLVTDDISEGEGPPAEDKIGDSSARDSDSTSPSQQRTKDIGETKSFLRVRSIAELQRMKIHLCAVCGQSFDTLPAFEQHSKTHEAGAKPKRMTPPMVAPTNRRSSGSVSSPLITQLQQQFHRLPNGQLSPNQADLNKRMSPSIVPSYHQQQQQQQQQQQQQQQQQQQQQQQQQQLQQQQLQQQLQQQQQQQQQQQQQQQQQQQQQPQQPNYWFPPSNSTNSNGMPSMNYNYGMSQQQPQLTQQSLLRQAIATNYASPRGPPPAYPSSSGTMVSSTSGSIVSSRPSTVQSSQRNLPTNLGSLLSKPTAPSTLSQQSLPSFQEITNNHQSSMRMPYNSRYMGNEASMKSPMISALLQQKTPQITGKSYLRQQSDLGSYSSNGPQYSAPQQQQQQKILYTCKIPTCPFRSESVNVIRAHEKGHCLPSFTAPPNQMGQMQPPQPPQQQQQRLPVKHVSVNQIPERPRHAISSNRSVMNTSEKRYTCRICHLSFGMDTELVEHVTTLHNSPTSPVCCYVCDYCPSPILFESEEFLRQHMRIAHNHSCRLCNKRYPSQRHLAEHMETHT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01470046;
- 90% Identity
- -
- 80% Identity
- -