Ttub000749.1
Basic Information
- Insect
- Torymus tubicola
- Gene Symbol
- lilli
- Assembly
- GCA_035583055.1
- Location
- JAWWEQ010000001.1:11439210-11462213[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0015 77 3.9 13.4 44 129 52 144 32 154 0.57 2 3 1 5.3e+04 -9.8 20.5 438 489 190 239 169 247 0.47 3 3 1.5e-10 7.9e-06 26.9 2.7 324 381 245 303 239 317 0.90
Sequence Information
- Coding Sequence
- ATGCCGTCCTCCGGTGGCTATTACGACGATAGGAATCCATTGCTCAAGGGCACGCTGACCAGggtgacgacgacgacgacgacggtagcaGCGGCGAGGCTCTTTAACGAAGGTCCTTTTCACCGTCGACGTCTGGTAAACCCGGACGCCCATGACCGTACCACCCAGCAGATCCAGTCGAAACTAGGCAACTATTCGCTGGTGAAGCATTTGCTGGATGAGCCGAAACGTCTGATCGGTATTGAAGGTGTGCCACCCTCACCAGCACCAGCCAGCTCCGGTCATTCGCGGATGCCGTCGAGTCGAAGCTCACCCTCGGCATCCTCACAGGAATTTAAAAAGCCTGGTGGACCTCGCAACTCGTCCACGTCAGGCTCGTCCGTAGCGCCGGGTGCTAGTGGGAGTGCGTCCTCTTCGTCGTCATCCTCACAGAGGGGTGGCTTCGTAAAGCCCGCTGATGGTAAACCACCATATGGCGGTAGAGGAGGTTATCCAGGACAGCCGGTTAAACATGGGAGTAGTAGCAATGAACACCGCAGTCATGGACTGATACCGGCCAAAGGACCGCCTGGTCTCAGTTCGGGAAGTAATAGTGCtagtggtaataataataatagtggaAGTGCCAGTGGAAGTGCTAGCAATTCCGGACAGTTAGGGGGTAGCAATAGTAGTAATAGTGCGGGAGGTAGTggaagcagcagtagcagtgcgCAGAACAGGCTGCATTCCGCGAGTGTCAGGCTACCCAAACTTCCCATCGAAGCCGCGTCGAGCTCCAGGCATCTCAGCAACGACAGTACAGCAGAGGTGGAGACCATCCTAaaggAGATGACCATGCCACCAACGCCGCTGACGGCGATCGCCCAGACGCCGCGCAAGGAGTTGGAATCCAAGTTCACCTTCAATCCGGTGCTTGCCAAGCTGGAAGCACCGCAGGAAACCGCTAAGCCTCGTGAGTATTTTATACGTGTTtag
- Protein Sequence
- MPSSGGYYDDRNPLLKGTLTRVTTTTTTVAAARLFNEGPFHRRRLVNPDAHDRTTQQIQSKLGNYSLVKHLLDEPKRLIGIEGVPPSPAPASSGHSRMPSSRSSPSASSQEFKKPGGPRNSSTSGSSVAPGASGSASSSSSSSQRGGFVKPADGKPPYGGRGGYPGQPVKHGSSSNEHRSHGLIPAKGPPGLSSGSNSASGNNNNSGSASGSASNSGQLGGSNSSNSAGGSGSSSSSAQNRLHSASVRLPKLPIEAASSSRHLSNDSTAEVETILKEMTMPPTPLTAIAQTPRKELESKFTFNPVLAKLEAPQETAKPREYFIRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -