Ttex001163.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Torymus texanus
Gene Symbol
egg
Assembly
GCA_036873485.1
Location
JAYJLV010000001.1:17945861-17950784[-]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2 1.8e+04 -2.6 0.0 38 54 263 279 262 287 0.87
2 2 2.4e-12 3.5e-08 34.9 0.0 5 70 627 686 624 692 0.87

Sequence Information

Coding Sequence
ATGGCTAAGGCACAAGAAACAGAAGTAATCAACTTAGATTCCGATGATGACGAAGACCTTActacaaaaaacaaaagtaaaaagaaaacttgtaATTCAAATTGTATCAACTTTAAATGTACTTCAGGACTCAATATGAAACCTGCACCATCTTTTGCTTGTTCATTTTATGGAGTTAACAtggcaaagaaaaagaaacgtcaTATATGTGAATCATGTTTAGAAAATGCATTGAATCATCAAGAACAACTTGTAATTGCATTATTGGATCACAAGCCTCTACTTCAATGCGATTTTCCAGATCATACAATGGAAGTAGAAATTTCTGACAGTGATGAATCAGATAGTGAGGCACAAGTTGATGATGaaGAGTATGTGTTAGAAGATGACttgattgattttgaaaaaaaagttgatgaGTCATTAAAAgatgttcttcaaaaatatgatattgaGTACCAAATTCAAGAAGCTACTTCAGCATTAACAACGGAATGGCATGATATTGAtgCAAAAAATGCTGAGATAGATAAAGAAATAAGTGCAACAATATCAAAATTGGATAATCTACGTACATTTCTTTATAATGAGTTTAAACCAAATATTCAAATGTTGGAAGAACTCAAAATTGAAGATTCTGTAGACAATGCCAATCATGCCTTGGTTGCAACAAAGAAAGTTACACAAATTCGTGTACCTCAAAAACAACAAGTGCAAGATAACCAACCTGAAATCCTACAAGAAATTGAAAGAGATAACCGTTTGATTCAATCTATGGAGTTACCTCCAACTGGCCAATTAATTAAACCAGTGCCAGAAGTTGATGACTACGTTTTCACATTGAAGCACCCATTATTCCCATGGATAAAAGGAAAGGTTACCAACATTGTTTCAAGAAATCCTATACAATGTCGGGTAAAACTGGTACAAAAGAAATATGCTGGTCATGTAAAAGCATTAACTGGCAAACAAATGGCGTCAAGCTCTCCTAGTTCTGTAATTATACCTGTTGGAACAAGAGTTGttgctatttttcatgataCTTATTCTAGTAATTATTATAGTGGAGTTATTGCTGAACCTCCAAAATCAACTAACAAATACAGATACTTGGTGTTCTTTGATGATGGATATGCACAGTATGTCAAACATAAACACATATTTTTAGTTTGTGATAGTTCACCTAGAGTATGGGAAGATATACCTCATGAATCTCGTGATTTTGTCAAAAAGTATCTTGAATCTTATCCAGAAAGACCAATGGTGAAATTACAACGAGGTCAAGTTGTTAAAACTGAATGGAATGGAAAATGGTGGATCGCTCGTGTTAGAGAAGTTGATGCAAGTTTAGTACAAATGCATTTTGATGCAGACAACAGAACTGAATGGATTTACCGAGGATCTGCAAGATTGGGACCATTATACCTGGAATTGATGAAGGCTAATTTAAGACAACAAGGTTGTCATTCCTCAATAAGTACACCAAGCCGACATCATGGAGCATCTGTTATGAATaaaaatggcCCATATGTTGAGTACACATCAACTGCAACTGACGAACGAGATGCTCTTCTATCTGACAATAAAGAGAAGCAAAGGATAGCTACTGAGACAGCACTGACAGAAAGTGTAGCTGTTCCCCAGCAGAGCAGAGCCGTCGCCAAAAAGAGTACCGCCAAACGATCCATTGTTCCAGAACCATCATCACAATCAGCACAATCATCATCATATAATGCCAATATGGAAACTAAGTCTTCTCACAGTATTGTTTATTATCAaacgcaaaataaaattcaaacgaAAAAGTTTGTGCCACACAAATGTGGACCCAAATGCGTCGAGAGCATTTCTTTTACACCCGACGATCTTCGTGGCTACTCTCCGCTTTCGATTCCGCTTCTTTGTGGCTGGAATCGACAGCTTTGTAAGTATACGAAACCGAAGAAAGTCATTTTGTATCAAGCTCCTTGTGGTGTTCGTTTACGAAACATGGAAGAGCTTCATAGCTATTTGAGAATGACCAACTGCCCGATGTCCGTGGATTTGTTTGAATTTGACTACTGGGTACATTGTCTAGCTGAATTCGTACTTGATAAATGTTTCGTTAATATTAAAGATTTGAGTTACGGTGTGGAAAACGTGCCGATCCCGTGCGTCAACGAAATAGATCATGCCTATCCGGACACAATAAAGTACACGACCAAGCGCGAACCGACAGAAGATGTACATATAAACTTAGATCCTGAATTCCTCTGCTGTTGCGATTGCACGGACGACTGTCAAGACAAAGAGAAATGTCAGTGCTGGCAGTTGACAATTCAGGGTGCAACCCTTGGCGGTCGAGTGCCAAACGCCGCTGTTGGCTACGTCTATAAAAGGTTACCCGAGGCTGTAACTACCGGAATTTACGAATGCAACTCGCGTTGCAAGTGTTCGGTAAAGACATGCCTAAACCGAGTGGTACAACATCCGTTAAATCTGAAACTTCAAGTGTTCAAAACAGCACCTAGAGGCTGGGGAATCCGTTGCCTGAACGACATTCCCCTAGGCTCGTTCATTTGCATCTATGCAGGTAGACTGCTCACCGAGCAGGGGGCCAACGAGGGTGGCAAAAACTACGGTGACGAGTACCTGGCAGAACTCGACTACGTCGAAGTTGTCGAGGGTATCAAGGAAGGCTACGAGAGTGACGTGCTCGACCCAGAGATAActatcgacgacgacgatgaagacGACAAAGAcaagcaagataaaaaggaagaagaatCCGAGTCGCAAAAAGCGACGCCTAATGATTCAGATGATGATTTTAATATCACCAAGGAACTTCAAAAGAATAATCTCACAATAGAAGACATGGATGAGGATTCAACTTCGTCTATTAGgaGTCGGTTAAGGAAACGCAAAAAGGGAGAGGAGAATCAAGGATCTGACAAATCTGAGGATGGCAGTGTAACAAAGAATGAACAAGATAAAGCGGGCAGTGACGAAGACGAAACCGTTCGAGAGCCAAGTAGATTCGATCTTGCTGTGGATACACAAAAAATTGGACGAGAAATGTTCAAGTCAGTCCGAGATTTCTTCGGAGAAGACGAGGCTGTTTATATTATGGATGCCAAAACTACTGGAAATATTGGACGTTATCTAAATcaCTCTTGTGATCCAAATGTATTCGTTCAGAATGTATTTGTGGACACTCACGATGTTCGATTTCCTTGGGTAGCTTTCTTTGCATTGAGCTATATAAGGGCAGGTCAAGAGTTAACGTGGAATTATAGCTATGATGTAGGAAGTATTCCTGGAAAAGTGATCCTTTGTAAATGTGGAGCAAGCAACTGCCGAGGTCGGctgttgtaa
Protein Sequence
MAKAQETEVINLDSDDDEDLTTKNKSKKKTCNSNCINFKCTSGLNMKPAPSFACSFYGVNMAKKKKRHICESCLENALNHQEQLVIALLDHKPLLQCDFPDHTMEVEISDSDESDSEAQVDDEEYVLEDDLIDFEKKVDESLKDVLQKYDIEYQIQEATSALTTEWHDIDAKNAEIDKEISATISKLDNLRTFLYNEFKPNIQMLEELKIEDSVDNANHALVATKKVTQIRVPQKQQVQDNQPEILQEIERDNRLIQSMELPPTGQLIKPVPEVDDYVFTLKHPLFPWIKGKVTNIVSRNPIQCRVKLVQKKYAGHVKALTGKQMASSSPSSVIIPVGTRVVAIFHDTYSSNYYSGVIAEPPKSTNKYRYLVFFDDGYAQYVKHKHIFLVCDSSPRVWEDIPHESRDFVKKYLESYPERPMVKLQRGQVVKTEWNGKWWIARVREVDASLVQMHFDADNRTEWIYRGSARLGPLYLELMKANLRQQGCHSSISTPSRHHGASVMNKNGPYVEYTSTATDERDALLSDNKEKQRIATETALTESVAVPQQSRAVAKKSTAKRSIVPEPSSQSAQSSSYNANMETKSSHSIVYYQTQNKIQTKKFVPHKCGPKCVESISFTPDDLRGYSPLSIPLLCGWNRQLCKYTKPKKVILYQAPCGVRLRNMEELHSYLRMTNCPMSVDLFEFDYWVHCLAEFVLDKCFVNIKDLSYGVENVPIPCVNEIDHAYPDTIKYTTKREPTEDVHINLDPEFLCCCDCTDDCQDKEKCQCWQLTIQGATLGGRVPNAAVGYVYKRLPEAVTTGIYECNSRCKCSVKTCLNRVVQHPLNLKLQVFKTAPRGWGIRCLNDIPLGSFICIYAGRLLTEQGANEGGKNYGDEYLAELDYVEVVEGIKEGYESDVLDPEITIDDDDEDDKDKQDKKEEESESQKATPNDSDDDFNITKELQKNNLTIEDMDEDSTSSIRSRLRKRKKGEENQGSDKSEDGSVTKNEQDKAGSDEDETVREPSRFDLAVDTQKIGREMFKSVRDFFGEDEAVYIMDAKTTGNIGRYLNHSCDPNVFVQNVFVDTHDVRFPWVAFFALSYIRAGQELTWNYSYDVGSIPGKVILCKCGASNCRGRLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00968824;
90% Identity
iTF_01469686;
80% Identity
-