Ttex005905.1
Basic Information
- Insect
- Torymus texanus
- Gene Symbol
- -
- Assembly
- GCA_036873485.1
- Location
- JAYJLV010000046.1:21846352-21847976[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-11 1.3e-07 33.1 0.1 2 44 15 56 14 57 0.92 2 2 3.6 5.9e+03 -1.0 0.0 14 23 133 142 126 143 0.70
Sequence Information
- Coding Sequence
- ATGAGCAcgaaatcaaagaaaaagttaCGAATACTATACAGCAGGGAGACCCTGAAGGAGGCCATGACTGCGATTCATGCCGGCATGTCTATCAACACCGCGAGTAATAAATACCACATTCCCAGGTCGACTTTGCAGAGTAAAAAGGTGGGCAAGTACGCGGATAAACGACCCGGGCCCGATACCGTACTCACTACCACGGAAGAAGCTTCATTAGCCCAATGGATCATTAGCTGCAGCAAGTGCGGCATGCCCGTTGGCAAGCAGCATCTGCTCAACAGTGTTGCTCTCATGGTGAAGCTGTTGAATAGGGAGAATCCATTTGCCAATGGTCGACCAGGTAGACACTGGTATCAGGGTTTTTTGCGACGGCATGAGTATGTTGTAGAAAAAATAACAGAGAATACTTCCATTGCCAGAGCAGCAATTTGCGAGGCAAgcataaaaaagtggttttcaGTTGTCAAGTCATATTTGGAAGAGCGAGGGCTGTTGAACAATGAGTCTTCAAGAGTATTTAGCATGGAAACGGTATTGTTAGCATATCCCAAGTCTGGTAAATTTAGCAAAAACTTATCTGTACATATAGCTGGTAATGCAGCTGGGGAATTGGCACCTCCAATGATAATGTATAATTATCAGAGGGTACCTggaaaagtttatgaaaatctTTCCCAGCTGTGGTTTTGCAGAAAATCTGAGAGTGAAAGCATAACaccagaaaatttatttgactatGTGACAAAGTGTTTTTATCCATGGGtagtagaaagaaaaattgaatttcctgTTCTATTGTTCCTAGATGGTAAAGTACCACATCTGACTCTAACGTTAAGtgatttttgttggaaaaataaaattgaactgGTAGCCTTGCAACCAAATGCTTCGTTTGTACTTCAACCATTAGAAGTATCATTATTTCCATTATTAAAAGAAGCTTGGAAAGAAGCACTCAGTAGGTACTGTACGAAAACAAAGgctgttaatttattaaaagaacaaATAGCTTCCCTATTCAAATCAGTTATGGATGGATTTGATCTTGTTAAAATCTTAAAAGAAGGTTTTCAAAATAGTGGACTCCACCCATGGTCAGGcaatgtaattaattatgaaaaaattcctaATCAACAAGTAGATAAAATACCAACAGAACGTGAAGCGTATACACCATATATACCAGAATTGACACTGTCACTAGAAGTGCAAGGATTTGCAAACGATTCTGGTCTAACAGTTGAGTTTTTACAGTATTTCGAACAATTGCTTGATCCCGATACATTACAAGCATTTAAGAATGTTCAAGAATATGATGAGTGGACTGGAAAATTAGAAGACACTGGTCTTTTTTACTTCTggagaaaaattgttaatttatgtaAGACTGATGAAATGAAACTACAACAAAATATTGTTTCCAGTATGTATGATACAGTCAGTatTAGTTATGAAGAGACTGACATTCACTCtgatttgaatgaaaataaagatatggAATTTCTTGATGATCCATTGAAGTTATGCATAACTCAAATGGAAGAATCTTaa
- Protein Sequence
- MSTKSKKKLRILYSRETLKEAMTAIHAGMSINTASNKYHIPRSTLQSKKVGKYADKRPGPDTVLTTTEEASLAQWIISCSKCGMPVGKQHLLNSVALMVKLLNRENPFANGRPGRHWYQGFLRRHEYVVEKITENTSIARAAICEASIKKWFSVVKSYLEERGLLNNESSRVFSMETVLLAYPKSGKFSKNLSVHIAGNAAGELAPPMIMYNYQRVPGKVYENLSQLWFCRKSESESITPENLFDYVTKCFYPWVVERKIEFPVLLFLDGKVPHLTLTLSDFCWKNKIELVALQPNASFVLQPLEVSLFPLLKEAWKEALSRYCTKTKAVNLLKEQIASLFKSVMDGFDLVKILKEGFQNSGLHPWSGNVINYEKIPNQQVDKIPTEREAYTPYIPELTLSLEVQGFANDSGLTVEFLQYFEQLLDPDTLQAFKNVQEYDEWTGKLEDTGLFYFWRKIVNLCKTDEMKLQQNIVSSMYDTVSISYEETDIHSDLNENKDMEFLDDPLKLCITQMEES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01467874;
- 90% Identity
- -
- 80% Identity
- -