Ttex007181.1
Basic Information
- Insect
- Torymus texanus
- Gene Symbol
- -
- Assembly
- GCA_036873485.1
- Location
- JAYJLV010000056.1:14240970-14245705[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.4e-12 1.2e-08 36.4 0.0 1 39 327 366 327 370 0.90 2 4 2.3e-11 3.7e-08 34.9 0.0 2 39 382 419 381 422 0.94 3 4 3.1e-18 5.2e-15 56.8 0.0 2 45 437 481 436 481 0.97 4 4 1e-17 1.7e-14 55.2 0.0 1 42 488 530 488 531 0.97
Sequence Information
- Coding Sequence
- ATGTATTTACAGTCGCTACTGAAGACGGCCGACCAGCTGAAAATCAAGGGCCTGTGCGAGGTGCCGGAGAGTAGGGAAGGCCCCTCGGTGAGCCTGAGTTCACCGCCACGGGACTCGAGCACACCACGGGTGAATTTTCACACGAAACTCAAGCGGCATCATCAGAGATACAAAAAGGCTCGTACGAATTTCGAGACCAacggcaacaacaacaataacaacagtagggttcataatcatcatcaacaGGATAGGTACAAGGAGGAGGATTACGTCGAGAGCTACGTGAGGGATTGCAATAAGGAGAACCGCCGCGAGTGCTGGCCGGCCGAAGATGACGAGTGTATGGAGACGACAGCGACGACCCCAGCAGTAGTCCTGGACTCGTGCCAGCGCAGCAATAGCGccgggggaggaggaggaggaggaggcggtggtggtggtggcggtggaggaggaggtggaggtggtggGAGCGCGGACAACAACAACAGCGGCGGCGCTGCTGCCAACAACAACGCCGCCGGCGGCGCCAACTCCACGACGACGAACAACAACGGCGACATGTTCTGTCACACAGGTCTCGGGCATTATGGGCATCATCCGGACCCGGCGGAGGTCGATCTACCACCGGAGACACAGCCAACGCCGCCTAGCGCCACCCTCGTAGGCACGACCATCACTCACCTAAGGGACCCGGATCACCATACGGcagACATCCAGAGTTGCGACAGTGTAAAGGTGAAATTCGAGACACTGCACACGATGGACTCTACGGACACGATCGACATTGACAGCCACATGTCCGACCGGGCGAGTGTCAGTTCGAAAAACGCAGACGAcaatatgatgatgataacgcCGGAGTTACTCGGCCTCATGCCATCTGGTAGCAGTGTGCACTCGGATTCAGGCGAGAACAATTCACGTAGTCACTCTGGACAGTCCGGATCGCATCATCACGGCTCTAAGTCCTGGACGCAGGAAGATATGGACGCGGCTCTCGACGCACTCAGGAATCACGATATGAGTCTCACTAAGGCTTCCGCGACGTTCGGCATTCCCTCGACGACGCTCTGGCAGCGCGCGCACCGCCTCGGCATCGACACGCCGAAGAAAGACGGCCCGACGAAATCCTGGAGCGACGAAAGCCTCAACAACGCGTTGGACGCGTTACGTACCGGAACAATATCCGCGAACAAGGCCTCGAAAGCCTTCGGTATACCCTCGAGCACGCTTTATAAGATTGCGAGGCGAGAGGGAATCAGACTGGCAGCGCCGTTCAATGCCAGCCCGACGACCTGGTCGCCAGCTGATCTTGATCGTGCACTAGAGGCAATAAGGTCTGGACAGACATCTGTACAAAGGGCGTCAACAGAATTTGGCATACCCACAGGGACGCTTTATGGGAGATGTAAGAGGGAAGGTATCGAACTCAGTCGGAGCAATCCCACGCCCTGGAGTGAGGATGCCATGACGGAGGCGCTCGAGTCTGTTAGATTGGGACACATGAGCATCAACCAGGCGGCGATCCACTACAATCTGCCGTACTCCTCGCTCTACGGTCGCTTCAAGCGCGGCAAGTACGAGGAGCCGGTGGTAAGCGAGATGTCCCAGGATGGCTCGTCACAGCACTTCCATCAAAGTCCAACGCCGAACAACCACTCGTCCTCGCTGCCCGACCAGATGCCCTACCAGGGTAGCTGA
- Protein Sequence
- MYLQSLLKTADQLKIKGLCEVPESREGPSVSLSSPPRDSSTPRVNFHTKLKRHHQRYKKARTNFETNGNNNNNNSRVHNHHQQDRYKEEDYVESYVRDCNKENRRECWPAEDDECMETTATTPAVVLDSCQRSNSAGGGGGGGGGGGGGGGGGGGGGGSADNNNSGGAAANNNAAGGANSTTTNNNGDMFCHTGLGHYGHHPDPAEVDLPPETQPTPPSATLVGTTITHLRDPDHHTADIQSCDSVKVKFETLHTMDSTDTIDIDSHMSDRASVSSKNADDNMMMITPELLGLMPSGSSVHSDSGENNSRSHSGQSGSHHHGSKSWTQEDMDAALDALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALESVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVSEMSQDGSSQHFHQSPTPNNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00304983;
- 90% Identity
- iTF_01464950;
- 80% Identity
- -