Ttex003870.1
Basic Information
- Insect
- Torymus texanus
- Gene Symbol
- e2f8
- Assembly
- GCA_036873485.1
- Location
- JAYJLV010000027.1:6375093-6377420[+]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.9 5.7e+04 -4.1 0.0 4 20 39 55 38 60 0.74 2 3 2.7e-25 4e-21 76.5 0.0 1 65 75 143 75 143 0.94 3 3 3.2e-19 4.7e-15 57.0 0.4 2 57 212 287 211 302 0.89
Sequence Information
- Coding Sequence
- ATGTCGAGCCAGAATGAGAATAGATCAACACCGGAGCGTAGAGTCCTGGGGGAGCTAGGAAATAATCCTGACTCACCTACTGCCAATCTCAGACTGCTCACTACTCTTGCGTCCAGTTTGAAGAATGCTACAGATAATGCCTGCCAGGACTGCTCGAGCTCCAGCAATGTTGTACAGGTGGCACCTGTTCAGGATTCCGGGTGCCTCAAACTTCTGCCTAGGAAGGAAAAGTCTCTTAGTCTTTTATGCgaaaagtttttaaatttattccctTTAAAAATCAGAGATAATGCTCCAAAGGAAATTTCTCTTAATACAACTGCCCAAGCTCTTGGTACTGAAAAACGAAGAATATATGACATAATAAATGTTTTGGAAAGCTTGGAAATGGCTTCCAAGGCTGGCAAAAACCAATATTATTGGCATGGTGATTCACGATTATCAACAACgcttgcaaaattaaaaatgcaagcTATTGAACTTGGATTAGAAAAGCAAATCCAAGAAATACAGAAAATCAATAGAGCCTATATAGAAAATTCTTGTCAATCTTGCAGTACCGCATCAACTTCTTTAATGGTCCCTCAGAGTCCAGTCATAGATTATTGCTTTCCAGAGGGTAATGTTAAAGAAGATAAGAGTTTGGGTGTCATGTGTAGAAAATTTGTAATGCTGTTTCTTGTTTCTTTAAAGAATGGtgttataaatttagatatagcagcaaaagttttaattaatgagCATGATGGTTCTTTAGATTCAAAGAACAGTACTATGCAATCACGATATAAGACAAAAGTTAGACGACTTTATGACATTGCAAATGTATTATCAGCTATACGTTTGATAGAAAAAGTTGATATATATAACTGTGTCATTAGAAAACCAATTTTTAGATATAGAGGACCAATTGTTGACTGCCTTAATTTTGATGCTgaaaCTCCAACCACTGAGAATGCAAGTCAATCACTGGTAGGAATGACTAcaccaaataaaaaatcatctgaTACTTCAAATTTTCGTGCCTTAAGCAGGCTTTCCACATTTGGCAGAAGATTAATTACAAGCACGccaattgtaaataaaagagatACAAGAAAACGAAAACTTTTTGTCACAGacAACAAATTTGAAAGAACTCAAAGTTCGCCGTGCCTGAGTACAGCCAAGAGACGTAGCATGGACCGCTTAGACGATTCGATTCTCAAAGTAGCCGAAATGGAGCTCAAGCGAATGAGGTCCAGCGAGAACAAGCCAAAAGTCTGCACGAAACTATTCCCCCGTCACAATTCCGACTCCTGCATCTCACCCTCGAAGCTCGACACGAGTACAACCGACTCCGAGGAGTCACTTCGTAGTATTGTGGCCTCGACACCTTCGACCTCGAGTGAGCAGTCCAGCTCCATAATCCTCGATAGCAGCATCTCCCCGCCGCCCATCACACTTCCAGTAGTTAGTAAAGAAAATCATCTAGTCAGCGAAACGCAAAAGCTCGGTGTGACGTCGGCACCCATTCGCACGTTGTGTATAAACGTGCCGCTCGAGCTGAAAATCGCGCCGTTCTCAGCGCTCCAAAATCACCGACGCATCGGTCAGCCGAAATTCGTCAAACTTACGAATTTCGATATGAAGAAGTTGGTGCCTATCTCGAAAGAAGATCTTAGGATCAAATTACCGTTGCAGTCGACAGTGGCGACGAGTAGTAAATGCGCCGTAGTGCAGAAGCCAAATATCGCGATTCTGGCGCAAATgccgaataaaaaaatttgcccGGGTGATACATTTAAGGCAGTGAAGGTCGGCAATACCTTCCAGCTAGTACCGCTCGAGCGTACGAGTGATTAG
- Protein Sequence
- MSSQNENRSTPERRVLGELGNNPDSPTANLRLLTTLASSLKNATDNACQDCSSSSNVVQVAPVQDSGCLKLLPRKEKSLSLLCEKFLNLFPLKIRDNAPKEISLNTTAQALGTEKRRIYDIINVLESLEMASKAGKNQYYWHGDSRLSTTLAKLKMQAIELGLEKQIQEIQKINRAYIENSCQSCSTASTSLMVPQSPVIDYCFPEGNVKEDKSLGVMCRKFVMLFLVSLKNGVINLDIAAKVLINEHDGSLDSKNSTMQSRYKTKVRRLYDIANVLSAIRLIEKVDIYNCVIRKPIFRYRGPIVDCLNFDAETPTTENASQSLVGMTTPNKKSSDTSNFRALSRLSTFGRRLITSTPIVNKRDTRKRKLFVTDNKFERTQSSPCLSTAKRRSMDRLDDSILKVAEMELKRMRSSENKPKVCTKLFPRHNSDSCISPSKLDTSTTDSEESLRSIVASTPSTSSEQSSSIILDSSISPPPITLPVVSKENHLVSETQKLGVTSAPIRTLCINVPLELKIAPFSALQNHRRIGQPKFVKLTNFDMKKLVPISKEDLRIKLPLQSTVATSSKCAVVQKPNIAILAQMPNKKICPGDTFKAVKVGNTFQLVPLERTSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01469453; iTF_01464833; iTF_01467750; iTF_01466896; iTF_01465976;
- 90% Identity
- iTF_01464833;
- 80% Identity
- -