Basic Information

Insect: Torymus sinensis
Gene Symbol: Prdm15
Assembly: GCA_030522985.1
Location: JAPYZP010001476.1:7991-10380[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.9e-06 0.00045 22.4 1.6 1 23 302 324 302 324 0.98

2 12 0.0017 0.38 13.1 3.9 1 23 328 350 328 350 0.95

3 12 0.00026 0.06 15.7 3.8 1 23 355 377 355 377 0.96

4 12 4.4e-05 0.01 18.1 2.2 1 23 426 448 426 448 0.97

5 12 0.00096 0.22 13.9 1.3 1 23 453 475 453 475 0.97

6 12 0.00016 0.036 16.4 0.5 1 23 525 547 525 547 0.98

7 12 0.00028 0.064 15.6 1.6 2 23 555 576 555 576 0.97

8 12 1.3e-06 0.0003 22.9 2.1 1 23 587 609 587 609 0.96

9 12 0.00029 0.068 15.5 1.6 1 23 615 637 615 637 0.97

10 12 0.00021 0.048 16.0 0.7 1 23 643 665 643 665 0.98

11 12 6.2e-06 0.0014 20.8 2.0 1 23 671 693 671 693 0.96

12 12 0.00011 0.025 16.8 0.3 1 22 699 720 699 720 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.9e-06	0.00045	22.4	1.6	1	23	302	324	302	324	0.98
2	12	0.0017	0.38	13.1	3.9	1	23	328	350	328	350	0.95
3	12	0.00026	0.06	15.7	3.8	1	23	355	377	355	377	0.96
4	12	4.4e-05	0.01	18.1	2.2	1	23	426	448	426	448	0.97
5	12	0.00096	0.22	13.9	1.3	1	23	453	475	453	475	0.97
6	12	0.00016	0.036	16.4	0.5	1	23	525	547	525	547	0.98
7	12	0.00028	0.064	15.6	1.6	2	23	555	576	555	576	0.97
8	12	1.3e-06	0.0003	22.9	2.1	1	23	587	609	587	609	0.96
9	12	0.00029	0.068	15.5	1.6	1	23	615	637	615	637	0.97
10	12	0.00021	0.048	16.0	0.7	1	23	643	665	643	665	0.98
11	12	6.2e-06	0.0014	20.8	2.0	1	23	671	693	671	693	0.96
12	12	0.00011	0.025	16.8	0.3	1	22	699	720	699	720	0.96

Sequence Information

Coding Sequence: ATGGCAATAAACAATAGTTATTTCGTTATGCCGATGAACATGGATAGAGTTTGTCGCATTTGTTTACAAGAGAATACAAATTTATCTCCTATATTTTGTAATGGTCAGAGTGTGGCCAATCTTATTGATTTGCCgcagaaaattcaaatttgtggTGGAGTTGAATGTCAAGAGCAAGATGGATTGCCTACTTTGATATGCGATGTTTGTATATACAAGGCAAGTGTTGCTCACGAATTTAGGCAACTATGTCAACACTCAGATGCTCGCTTAAggctttattataataaacctGCTAAATACAATGCCATTgATTCCGGTACACAGACTGATCAACAAACACAAGCACTTTTAACAAAAACTGCTGAAGAattacaaaatgattattttgtaaAGCaagaagttattaataatcaacaATTTCATACAGCAATATCAAGTGGAGATTATCATTCAGAGCCTCAAGCAAATTCAGTTGTTACAATTGAAGCATCTATCCCTACAGTTGATGTAAATATGACGGTTGAAGAAgagaaactttttaattgccatCTTCACTTCACAGAGCAACCAAAGGATGTTGATAAAAGCTCTCAAATTGTGCCCTGTGATACACAATCAGTGACATGTACACAAGAATTAATTCCAGTTTCTACAAGTTTAATAGATAGTGTTTGTACTATGCAGGCTGATGTAGACACTGTTGAAAGTGAAGCAAAAGcagatgttaattattttaattatatgccAAAAGATATAGAAACTATAGAAGATAATAGTTTGCATAAGGAACCAACAGATGACAGTTcaaaattgttacaaaataatacttttaatggTACAGATATAGAAGGTGATTATTTTGATAGAGATTGTGATAGTCAAAATTCAGAGGACATAAAATTCAAATGTGAAATCTGCTCCAAAGCTTATACTACACAAAAGGGTTTAAAGAAACATCAGTTAAGTCATGAAAAGCAACATAAGTGTGATATTtgttcaaaaacattttttaaattagaagaattagaaaaacataAGAGTTTTCATACATCGAAACCTCATGCTTGTCATTTGTGTAATGCTAGTTTTTCAAAATCACAAAGCTTAGCTAAGCATTTAAAATCTCACAACGAAAAAGTCAATGATAGTCTGAATCCAgatgagaaaaaagaagaaacagaTTTAAAAAGGAATTGTAAAAATGAAGATGATACAGAAGATGAAAATGACAAAGGAAATGAGCTAGATGGATTTGAAAATGCTCCagagatttttaaatgtgaTGAATGTGGTCAGTATTGTTCAACATTAAAAAATCTCAAACGCCATGCCCTCATAcatggtgaaaaaaaatactcttGTACTGTATGTAAAAAATGGTTCTTCCGACCAGACACACTAAAGAAACATGCAGAAAGACATGGACATGGACTGCTAGATAATCTTAAtgaagaaaacagtttttataatGACTCAGACGATGATGGATTCCCTAGTACTACAAAAACCATTAAAACTGACAATGATATaacaaagaaagaagaaagtGAAGAAGAAGGCAATGGAGAATACAAGTGTCAGAACTGTGACAAGGTAATGGCGACTAAGAAAGGTCTGCGAAGGCATGTAGCGATGCATAAGCCAAAGCCGGAACCAGCCGTCTGTGAAATCTGCAAAAAAGTCTGCGCCAGCCAAGCTCGTCTCACCCTCCACCAGAAAACCCACAATAAGCCGAAGGAAAAAGTGCCGCGCGAGTACCTCTGCCACATCTGCAGCAAAGTCTATCCCAGCAACTCGTCGCTCACCTACCACATGCGCACTCACACAGGCGTCAAGCCTCATGTCTGCAAGACCTGCAACAGCGGCTTCACCACGACAACGAGTCTGGCTAATCACATACGCATCCACACAGGTGACAAGCCCTTCGTCTGTCACGTCTGTAGCGCTGCCTTTGCCGTCAGCTCTGCATTCAGACGCCACTTGACCCGTCATACCGGCGAGGCCAATTATCTCTGCAAAACGTGTGGCAAAGCCTTCAAACGGCTCAGCACCTTGAAGGAGCACACTTACACGCATTCCGGCGAGAAGCCCTACGTGTGCAAGACTTGCGGCGCAGCGTACAGTCACAGCGGTAGCCTCTTCGCTCATCAAAAGCGCTGTCGCGCCCAGTACACTGAGATGGTCGTCGATGATCATCATCATGCGGTCGCTCATCATATCCACGTTAACAATGTGCAATCCGCAGTGCGGTCGCTTGCTGTGATAGGTCAGATGTTTTGA
Protein Sequence: MAINNSYFVMPMNMDRVCRICLQENTNLSPIFCNGQSVANLIDLPQKIQICGGVECQEQDGLPTLICDVCIYKASVAHEFRQLCQHSDARLRLYYNKPAKYNAIDSGTQTDQQTQALLTKTAEELQNDYFVKQEVINNQQFHTAISSGDYHSEPQANSVVTIEASIPTVDVNMTVEEEKLFNCHLHFTEQPKDVDKSSQIVPCDTQSVTCTQELIPVSTSLIDSVCTMQADVDTVESEAKADVNYFNYMPKDIETIEDNSLHKEPTDDSSKLLQNNTFNGTDIEGDYFDRDCDSQNSEDIKFKCEICSKAYTTQKGLKKHQLSHEKQHKCDICSKTFFKLEELEKHKSFHTSKPHACHLCNASFSKSQSLAKHLKSHNEKVNDSLNPDEKKEETDLKRNCKNEDDTEDENDKGNELDGFENAPEIFKCDECGQYCSTLKNLKRHALIHGEKKYSCTVCKKWFFRPDTLKKHAERHGHGLLDNLNEENSFYNDSDDDGFPSTTKTIKTDNDITKKEESEEEGNGEYKCQNCDKVMATKKGLRRHVAMHKPKPEPAVCEICKKVCASQARLTLHQKTHNKPKEKVPREYLCHICSKVYPSNSSLTYHMRTHTGVKPHVCKTCNSGFTTTTSLANHIRIHTGDKPFVCHVCSAAFAVSSAFRRHLTRHTGEANYLCKTCGKAFKRLSTLKEHTYTHSGEKPYVCKTCGAAYSHSGSLFAHQKRCRAQYTEMVVDDHHHAVAHHIHVNNVQSAVRSLAVIGQMF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01467435;
90% Identity: iTF_01469082; iTF_01469934; iTF_01465617;
80% Identity: -