Basic Information

Insect: Torymus aiolomorphi
Gene Symbol: PRDM15
Assembly: GCA_036365515.1
Location: CM070874.1:76732565-76734972[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.8e-06 0.00085 22.4 1.6 1 23 303 325 303 325 0.98

2 12 0.0015 0.72 13.1 3.9 1 23 329 351 329 351 0.95

3 12 0.0086 4.1 10.8 1.7 1 23 356 378 356 378 0.97

4 12 4e-05 0.019 18.1 2.2 1 23 427 449 427 449 0.97

5 12 0.00087 0.42 13.9 1.3 1 23 454 476 454 476 0.97

6 12 0.00014 0.069 16.4 0.5 1 23 526 548 526 548 0.98

7 12 0.00025 0.12 15.6 1.6 2 23 556 577 556 577 0.97

8 12 1.2e-06 0.00056 22.9 2.1 1 23 588 610 588 610 0.96

9 12 0.00027 0.13 15.5 1.6 1 23 616 638 616 638 0.97

10 12 0.00019 0.091 16.0 0.7 1 23 644 666 644 666 0.98

11 12 5.6e-06 0.0027 20.8 2.0 1 23 672 694 672 694 0.96

12 12 0.00014 0.067 16.4 0.2 1 22 700 721 700 721 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.8e-06	0.00085	22.4	1.6	1	23	303	325	303	325	0.98
2	12	0.0015	0.72	13.1	3.9	1	23	329	351	329	351	0.95
3	12	0.0086	4.1	10.8	1.7	1	23	356	378	356	378	0.97
4	12	4e-05	0.019	18.1	2.2	1	23	427	449	427	449	0.97
5	12	0.00087	0.42	13.9	1.3	1	23	454	476	454	476	0.97
6	12	0.00014	0.069	16.4	0.5	1	23	526	548	526	548	0.98
7	12	0.00025	0.12	15.6	1.6	2	23	556	577	556	577	0.97
8	12	1.2e-06	0.00056	22.9	2.1	1	23	588	610	588	610	0.96
9	12	0.00027	0.13	15.5	1.6	1	23	616	638	616	638	0.97
10	12	0.00019	0.091	16.0	0.7	1	23	644	666	644	666	0.98
11	12	5.6e-06	0.0027	20.8	2.0	1	23	672	694	672	694	0.96
12	12	0.00014	0.067	16.4	0.2	1	22	700	721	700	721	0.95

Sequence Information

Coding Sequence: ATGGCAATAAATAATAGTTATTTCGTTATGCCGATGAACATGGATAGAGTTTGTCGCATTTGTTTACAAGAGAATACAAATTTATCTCCTATATTTTGTAATGGTCAGAGTGTGGCCAATTTGGTTGATTTGCCGCAGAAAATTCAAATTTGTGGTGGGGTTGAATGTCAAGAGCAAGATGGCTTGCCTACTTTGATATGCGATGTTTGTATATACAAGGCAAGTGTTGCTCACGAATTTAGGCAACTATGTCAACACTCAGATGCTCGCTTAAGGCTTTATTATAATAAGCCTGCTAAATACAATGCCATTgATTCCGGTACACAGACTGATCAACAAACACAAGCCCTTTTAACGAAAACTGATGAAGAattgcaaaatgattattttgtaaaacaagaagttattaataatcaacaatttCATACAGCAATATCAAGTGGAGATTATCATTCAGAGCCTCAAGCAAATTCAGTTGTTACAACAATTGAAGCATCTATACCTACAGTTGATGTAAATATGACGGTTGAAGAAGagaaactttttaattgccatCTTCATTTCACAGAACAACCAAAGGATGTTGATAAAAGCTCTCAAATAGTGCCCTGTGATACACAATCAGTGACATGTACACAAGAATTAATTCCAGTTTCTACAAGTTTAATAGATAGTGTTTGTACTATGCAGGCTGATGTAGGCACTGTTGGAAGTGAAGCAAAAGCAgatgttaattattttaattatatgccaaaagacatagAAACTATCGAAGACAATAGTTTGCATAAAGAACCAACAGATGACAGTTCAAAATTGTTacaaaataatacttttaatgATACAGATATAGAAGGTGATTATTTTGATAGAGATTGTGATAGTCAAAATCCAGAGGACATAAAATTCAAATGTGAAATCTGCTCCAAAGCTTATACTACACAAAAAGGTTTAAAGAAACATCAGTTAAGTCATGAAAAACAACATAAGTGTGATATTtgttcaaaaacattttttaaattagaagAATTAGAAAAACACAAGAGTTTTCATACATTGAAACCTTATGCTTGTCATTTATGTATTGCTAGGTTTTCAAAATCACAAAGCTTAGCTAAGCATTTAAAATCTCACAACGAAAAAGTCAACGATAGTCTGAATCCAGATGAGAAAAAGGAAGAAACAGACTTGAAAAGGAATTGTAAAAATGAAGATGATACAGAAGATGAAAATGACAAAGGAAATGAGCTAGATGGATTTGAAAATGCTCCAGAGATTTTTAAATGTGATGAATGTGGTCAGTATtgttcaacattaaaaaatctcaaacgCCATGCCCTCATACATGGTGAGAAAAAATACTCTTGTACTGTATGTAAAAAATGGTTCTTCCGACCAGACACACTAAAGAAACATGCAGAAAGACATGGACATGGACTGCTAGATAATCTTAgtgaagaaaacagtttttataatGACTCAGACGACGATGGATTCCCTAGTACTACAAAAACCATTAAAACTGACAATGATATAACAAAGAAAGAAGAAAGTGAAGAAGAAGGCAATGGAGAATACAAGTGCCAGAACTGCGACAAGGTAATGGCGACTAAAAAAGGTCTGCGAAGGCACGTAGCAATGCATAAGCCTAAGCCGGAACCAGCCGTCTGTGAAATCTGCAAAAAAGTTTGCGCCAGCCAAGCTCGTCTCACCCTCCACCAAAAAACCCACAATAAGCCGAAGGAAAAAGTGCCGCGCGAGTACCTCTGCCACATCTGCAGCAAAGTCTATCCCAGCAACTCGTCGCTCACCTACCACATGCGTACCCACACGGGCGTCAAGCCTCATGTCTGCAAGACCTGCAACAGCGGCTTCACCACGACAACGAGTCTGGCCAATCACATACGCATCCACACAGGTGACAAGCCCTTCGTTTGTCACGTCTGTAGCGCTGCCTTTGCTGTCAGCTCGGCATTCAGACGCCACTTGACCCGTCATACCGGCGAGGCCAATTATCTCTGCAAAACGTGCGGCAAAGCCTTCAAACGGCTCAGCACCCTGAAGGAGCACACTTACACGCATTCCGGCGAGAAGCCCTACGTGTGCAAGACTTGCGGCGCGGCGTACAGCCACAGCGGTAGCCTCTTCGCTCATCTAAAGCGTTGTCGCGCCCAGTACACCGAGATGGTCGTCGATGATCATCATCACGCGGTCGCCCATCATATCCACGTTAATAATGTGCAATCCGCAGTGCGGTCGCTTGCTGTGATAGGTCAGATGTTTTga
Protein Sequence: MAINNSYFVMPMNMDRVCRICLQENTNLSPIFCNGQSVANLVDLPQKIQICGGVECQEQDGLPTLICDVCIYKASVAHEFRQLCQHSDARLRLYYNKPAKYNAIDSGTQTDQQTQALLTKTDEELQNDYFVKQEVINNQQFHTAISSGDYHSEPQANSVVTTIEASIPTVDVNMTVEEEKLFNCHLHFTEQPKDVDKSSQIVPCDTQSVTCTQELIPVSTSLIDSVCTMQADVGTVGSEAKADVNYFNYMPKDIETIEDNSLHKEPTDDSSKLLQNNTFNDTDIEGDYFDRDCDSQNPEDIKFKCEICSKAYTTQKGLKKHQLSHEKQHKCDICSKTFFKLEELEKHKSFHTLKPYACHLCIARFSKSQSLAKHLKSHNEKVNDSLNPDEKKEETDLKRNCKNEDDTEDENDKGNELDGFENAPEIFKCDECGQYCSTLKNLKRHALIHGEKKYSCTVCKKWFFRPDTLKKHAERHGHGLLDNLSEENSFYNDSDDDGFPSTTKTIKTDNDITKKEESEEEGNGEYKCQNCDKVMATKKGLRRHVAMHKPKPEPAVCEICKKVCASQARLTLHQKTHNKPKEKVPREYLCHICSKVYPSNSSLTYHMRTHTGVKPHVCKTCNSGFTTTTSLANHIRIHTGDKPFVCHVCSAAFAVSSAFRRHLTRHTGEANYLCKTCGKAFKRLSTLKEHTYTHSGEKPYVCKTCGAAYSHSGSLFAHLKRCRAQYTEMVVDDHHHAVAHHIHVNNVQSAVRSLAVIGQMF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01467435;
90% Identity: iTF_01468247;
80% Identity: -