Basic Information

Insect: Torymus sinensis
Gene Symbol: -
Assembly: GCA_030522985.1
Location: JAPYZP010000270.1:18753-21863[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0021 0.48 12.8 0.1 1 20 60 79 60 81 0.94

2 13 7.7e-07 0.00018 23.6 0.6 1 23 162 185 162 185 0.96

3 13 0.00011 0.026 16.8 2.7 2 23 192 214 191 214 0.95

4 13 0.0001 0.024 16.9 3.5 1 21 221 241 221 242 0.95

5 13 4.9e-08 1.1e-05 27.4 1.8 1 23 253 275 253 275 0.98

6 13 2.3e-05 0.0054 19.0 0.5 2 23 285 306 284 306 0.97

7 13 0.02 4.7 9.7 0.4 2 23 313 334 312 334 0.96

8 13 1.7e-06 0.00039 22.6 2.5 1 23 340 362 340 362 0.99

9 13 1.2e-05 0.0027 19.9 2.6 1 23 368 390 368 390 0.95

10 13 1.2e-05 0.0028 19.9 1.4 1 23 396 419 396 419 0.94

11 13 5.7e-07 0.00013 24.0 0.6 1 23 425 447 425 447 0.98

12 13 4.3e-07 0.0001 24.4 3.6 1 23 453 475 453 475 0.98

13 13 8.5e-06 0.002 20.4 0.9 2 23 482 504 481 504 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0021	0.48	12.8	0.1	1	20	60	79	60	81	0.94
2	13	7.7e-07	0.00018	23.6	0.6	1	23	162	185	162	185	0.96
3	13	0.00011	0.026	16.8	2.7	2	23	192	214	191	214	0.95
4	13	0.0001	0.024	16.9	3.5	1	21	221	241	221	242	0.95
5	13	4.9e-08	1.1e-05	27.4	1.8	1	23	253	275	253	275	0.98
6	13	2.3e-05	0.0054	19.0	0.5	2	23	285	306	284	306	0.97
7	13	0.02	4.7	9.7	0.4	2	23	313	334	312	334	0.96
8	13	1.7e-06	0.00039	22.6	2.5	1	23	340	362	340	362	0.99
9	13	1.2e-05	0.0027	19.9	2.6	1	23	368	390	368	390	0.95
10	13	1.2e-05	0.0028	19.9	1.4	1	23	396	419	396	419	0.94
11	13	5.7e-07	0.00013	24.0	0.6	1	23	425	447	425	447	0.98
12	13	4.3e-07	0.0001	24.4	3.6	1	23	453	475	453	475	0.98
13	13	8.5e-06	0.002	20.4	0.9	2	23	482	504	481	504	0.95

Sequence Information

Coding Sequence: ATGGGCGAAGTAATCGAGTTTCTGAAGGTGGAAAACACCTACTTGCAGGAGGACGGCGAAAATATCATTGTTGTTGataatTTATTGCAGAATGATGGCACGCTTATTATACCCGACATAATTAATGCGGAAGAagTACTTGCACAGAATGGCCAAATAATAGAGATTATTGGGGATTACGAATGCGTAACCTGTCACCGTATTTTTTCAAGTGATGATCTGTTGAAGGAACACTTAGAAGTATGCAGAGAAGAAGATGATGATGTTGACATTTTAGAATTAAGTAGAATCGATGACTTGGATTCAGATgatgaagatgatgaagaaATCGTAGATGATCCAGACTATAATACAGATTCTACAAGTCCATCAGactcccagaagttaaaaaataataataaaaaaggagcAATAAAGCCAGTATCTGAAGGACAATGTCATTGTTGTGCTGAAGATATAAAAACTGCTCATTCTGGAGGTCTTCATAAATGTCCTAACTGTGatctttcatttaaaaaaccATCCTCTTTAGAAAGACATTTAATTGTTATTCATTGGGAATCTGATTCGTGTTCATGCAATGATTGCGGTGCAACTTTTCGTGATAAAAAAGCTCTTGATAAGCATCGCTACACTACACATgtaaaaactaacaaaatttacCAATGTGATAAATGTGAAACTTACTTTTCAAGAAGCTACCATTTAAATCGTCACAAACAACAATCAGGCTGTCATGGAGATACCAATAATACCTTTTCATGTCAGgtttgtaataaaatatttacacgtaAAGATAATTTACGTGAGCACTTGCGAACTCATGCCGGAATGccacaaagaaagaaaaaatcttgTGATCTTTGTCCAAAGCAATTTTACACAAACCAGCAGTTAATCATCCATCAGCGTGTACATACTGGAGAAAGACCAGTAGAATGTGATTTGTGTCCTAAGACATTTTTATCTACTTTAGCAATGAAAAAACATCGCAGAGTGCACACTGGAGAGAAACcatttgaatgtaaatatTGCCAAAAAAAATTTGCTGCAAGAGAAACATTAAATCGACATCAAAGAACTCACACTGGAGAAAAGCCCCATGTTTGCCAGTAttgtaataagtcattcattcAAGCAGCTCAACTCAGAGCACATATATTTCACCATACAGGAGAAAACGGCTTTTACTGTGATATTTGTGGAAAAGCTTTTAATCGTAAAGCGCGTCTTACAAATCATAAAAAGTTTGTTCATGAAGGTGCTACACcttttaaatgtgaaatatgtgAAAAAGCTTTTACAAGAAAAGAAGATTTATCCAAACATGTAAACCTACATGCTGGAATCAAACctcATAAATGTGACACTTGCGGAAAATGTTTTGCTGCCAAATCATCCTTGCAAGCTCATATGAATACTCATCGACGAGAACCACCTCAATCTTGTGCAGAGTGTGGAAGAGCATTTATTCGTCAAGATTGTCTTATGCGTCACATACGAGCAAAACACAGAGATCTTTTAGAAGATGTACTTGGTGAAGCAGAAAAGAAACATCTACATTTACAAATGTTTAATATCGCTTACATTGCtgctgaaaaaattaaatctggAGAAACCAATCTTCTTTCAACAGAAGAATTGATGAAAGCTATTACAGAGCTCTTAACTATTTTGATAGAAAAAGAAACTTTGGAGttatttgGTTGGCTTCAGTCACCTCTACAAGATGTTTTAGAAGCAGTCATAAGAAGGTGTGGGCATGAACCACTTACAGCAGAAAGTGATTTACCCCTGCCAGAGAGACTAAGAGGAAATGTTAAACTTCTATTCAATGCTGTTATAGAAGATGAAAATGTGAAGTCTTTGTTAACAACACAAACTGTTGACGAAGTAATTATGCACGTtcttaaaataacgaaaaataacaaagaatCTGAAGAGAAACAATAA
Protein Sequence: MGEVIEFLKVENTYLQEDGENIIVVDNLLQNDGTLIIPDIINAEEVLAQNGQIIEIIGDYECVTCHRIFSSDDLLKEHLEVCREEDDDVDILELSRIDDLDSDDEDDEEIVDDPDYNTDSTSPSDSQKLKNNNKKGAIKPVSEGQCHCCAEDIKTAHSGGLHKCPNCDLSFKKPSSLERHLIVIHWESDSCSCNDCGATFRDKKALDKHRYTTHVKTNKIYQCDKCETYFSRSYHLNRHKQQSGCHGDTNNTFSCQVCNKIFTRKDNLREHLRTHAGMPQRKKKSCDLCPKQFYTNQQLIIHQRVHTGERPVECDLCPKTFLSTLAMKKHRRVHTGEKPFECKYCQKKFAARETLNRHQRTHTGEKPHVCQYCNKSFIQAAQLRAHIFHHTGENGFYCDICGKAFNRKARLTNHKKFVHEGATPFKCEICEKAFTRKEDLSKHVNLHAGIKPHKCDTCGKCFAAKSSLQAHMNTHRREPPQSCAECGRAFIRQDCLMRHIRAKHRDLLEDVLGEAEKKHLHLQMFNIAYIAAEKIKSGETNLLSTEELMKAITELLTILIEKETLELFGWLQSPLQDVLEAVIRRCGHEPLTAESDLPLPERLRGNVKLLFNAVIEDENVKSLLTTQTVDEVIMHVLKITKNNKESEEKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00691361;
90% Identity: iTF_01465607;
80% Identity: -