Tger031378.1
Basic Information
- Insect
- Torymus geranii
- Gene Symbol
- PAXBP1
- Assembly
- GCA_900474355.1
- Location
- UCWB01007212.1:696-2912[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.66 7.3e+03 -2.9 0.0 50 92 290 331 251 363 0.54 2 2 2.2e-24 2.4e-20 74.1 0.5 1 272 485 695 485 697 0.89
Sequence Information
- Coding Sequence
- ATGTCGCTGTTGAATAAACCTAGGCGGAACATCCGTCGTAGGAACATTAATGATGATGTGGAGGAGGATAATGACAACAAATTGATGGAAAGCGATGATAGGCAAAATGTTAAACAAACATTCAAAAAGAAAGATAAGCCTAAGCATACCCTTCTCAGTTTTGGGGAAGAATTGGAGAAAGCTGATGATGGAGAAGTTTTCAAAGTGAAGAAATCCTCAAGAAGCAAAAGACTGACGAAACAACTTGACCAGGAGGGGGCGAAAAAGAAAGGTGAAGAGAAAATGCAAGTGGACTCTGACACTTCTGAGAATGAACCTGAGGATGGCAAAGGACACATCTTCAAAGCTAAATCAGAACGatcagaaaatatgaaaatttttcctgaaagTGGATACAAATCAAATGCTACGACGCGCAGACGAGAACCTAGGAAGATTAGTCATCACTTCTTTCCACTCGAAGAACAAGgagatgaaaatggaaaatgtagACCATTGTACGAAGAAGATCATGACCGAAGCGATGAAGACTCTGAAGAAAGAATGAATATGACTAATACTAACGctttacataaagaaaaacaacgaaaaCCTTTCTTTGAGTCACAAGCGccaacaaaaaaattatccgCTGAAGAAAGTGAATCTGAAGAAGAAGAATGGGAAGTTCAACAAATGATAAAAGGGGTTTCTAGAGTACAGATTGCAGCAGCTTATCAGGATTTTATGATGCACTCAATGGAAATAGATCCTCAAATGTCAGAATCAAAAAATCCAATATTGTTGTCCAATATGATTCCAGCGGCTCTTCCACCTGCTATAACACAGTCACCAGATCCTACAAAATGTGTTCCTATTAAACCTGAAgaagtattacaaaaattgcgAGAAAGGTTGAATAATTTGAAAGACGACCTTGTAAGGCATAAGTTGAATTACGAAACAGTTGACCAAGAGTATACTCAAAGCAAGAAAGAGTTGGAAGCTCCACGCTGTTTATCTGAGATGGGTCAGCGCTGCAAATATTACCAAAATTTGCGTGGGTATGTCACTGACTTGGTAAAGTGTTTTGATGCAAAGCTGCCTCTGGTCGATGCATTGGAGTCTCGTTGGATAGACTTATGCGGAGATAGAGCAACCGAACTAATGGAAAGACGAAGACAAGATACAACAGATCAAGCAGAAGAAGTTACCACAGCTTCAAGAGGGCCAGTTGTAAGGAGAGGTCCAGAGGATGATGCACGAATGAGACGAGCTATCgaaaaggagagaagaagagcaCGCCGCCAACGAGCAAGAGTACTAGCTCTGACATCACGAAGACACATAGACGGCATGTCAAGTGATGATGAAATTACAGAACAACAAAATCTTGTTTTTAGACAAGCGAAAGAGGATATAGAAAAGGAATCCCGAGAGTTGTTTGTGGGCGTAGAAGACGATTTTTCCACGCTCCGAGGGATCTTGACAAAATTGGAAAACTGGAGGACAACCGATCCGGATACGTACAAAGAATCGTATGTTTCCCTTTGCATTTCAAAAATGATTGCTCCTATAATTCGCCTTGAAATTATTACATGGAATCCAATCATGGAAAGCACTGAGCTTGAAAGGTCGAAGACGTACGATTCTTTCCTTTTGTACGGTTCAACTACAAAGGAAACTGAAGAATTACTGCAACGCGATCCCAACATTCGCTTAATTCCCTTAACAATAGAAAAAGTTATAGTTCCAAAATTGACGACAATCGTCGAAAGAATTTGGGATCCAATGTCCACATCACAAACGGTTCGGTTAGTTGGGATAACAAATCGCCTAATCACGGATTATCCAAATTTACAAGAAACTAGTAAGGAATTAGAAGCATTGTTTTACgcatttttcgagaaaattgagACAGCAGTGGAGAACGATGTTTTTATACCAATATTTCCAAAACAAATTATGGATCCAAAGCACCCGTTTTTTCAACGTCAATTCACGATGGCTATTAAATTACTGAAAAATCTGCTGAGTTGCCAGGGTCTAATCGAcgatactaaattaaaaaacattgttttaggATCGCTACTAAACAAGTATCTTTTGGCAGGATTGCGAGTCGCTGCGCCGGCGGATGCTCTCATTAAAGCCAATATGATCATAAGTATGCTACCCCAAGCATGGTTGCAAGAAGAAACaattaaacatttgaaaatgtttgcaACCTTAATTTAG
- Protein Sequence
- MSLLNKPRRNIRRRNINDDVEEDNDNKLMESDDRQNVKQTFKKKDKPKHTLLSFGEELEKADDGEVFKVKKSSRSKRLTKQLDQEGAKKKGEEKMQVDSDTSENEPEDGKGHIFKAKSERSENMKIFPESGYKSNATTRRREPRKISHHFFPLEEQGDENGKCRPLYEEDHDRSDEDSEERMNMTNTNALHKEKQRKPFFESQAPTKKLSAEESESEEEEWEVQQMIKGVSRVQIAAAYQDFMMHSMEIDPQMSESKNPILLSNMIPAALPPAITQSPDPTKCVPIKPEEVLQKLRERLNNLKDDLVRHKLNYETVDQEYTQSKKELEAPRCLSEMGQRCKYYQNLRGYVTDLVKCFDAKLPLVDALESRWIDLCGDRATELMERRRQDTTDQAEEVTTASRGPVVRRGPEDDARMRRAIEKERRRARRQRARVLALTSRRHIDGMSSDDEITEQQNLVFRQAKEDIEKESRELFVGVEDDFSTLRGILTKLENWRTTDPDTYKESYVSLCISKMIAPIIRLEIITWNPIMESTELERSKTYDSFLLYGSTTKETEELLQRDPNIRLIPLTIEKVIVPKLTTIVERIWDPMSTSQTVRLVGITNRLITDYPNLQETSKELEALFYAFFEKIETAVENDVFIPIFPKQIMDPKHPFFQRQFTMAIKLLKNLLSCQGLIDDTKLKNIVLGSLLNKYLLAGLRVAAPADALIKANMIISMLPQAWLQEETIKHLKMFATLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01466211;
- 90% Identity
- iTF_01466211;
- 80% Identity
- -