Basic Information

Insect: Torymus auratus
Gene Symbol: -
Assembly: GCA_900474315.1
Location: UXGD01006231.1:6483-9932[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0023 0.24 12.6 1.0 1 20 233 252 233 254 0.95

2 13 4.2e-05 0.0043 18.1 4.6 1 23 304 327 304 327 0.96

3 13 0.014 1.5 10.1 8.7 1 23 358 381 358 381 0.98

4 13 0.016 1.6 10.0 2.7 1 23 415 438 415 438 0.98

5 13 2.3e-06 0.00024 22.1 1.8 1 23 449 472 449 472 0.97

6 13 0.00017 0.017 16.2 2.2 1 23 503 526 503 526 0.97

7 13 0.0036 0.37 12.0 1.4 2 23 539 561 539 561 0.97

8 13 0.27 28 6.1 0.4 3 21 566 583 565 584 0.85

9 13 0.085 8.8 7.7 3.3 2 19 592 609 591 614 0.90

10 13 0.00012 0.012 16.7 1.8 1 23 625 648 625 648 0.97

11 13 0.26 27 6.2 1.9 2 20 652 669 651 671 0.91

12 13 0.0038 0.4 11.9 0.7 3 23 681 702 679 702 0.95

13 13 0.99 1e+02 4.3 6.3 1 23 708 731 708 731 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0023	0.24	12.6	1.0	1	20	233	252	233	254	0.95
2	13	4.2e-05	0.0043	18.1	4.6	1	23	304	327	304	327	0.96
3	13	0.014	1.5	10.1	8.7	1	23	358	381	358	381	0.98
4	13	0.016	1.6	10.0	2.7	1	23	415	438	415	438	0.98
5	13	2.3e-06	0.00024	22.1	1.8	1	23	449	472	449	472	0.97
6	13	0.00017	0.017	16.2	2.2	1	23	503	526	503	526	0.97
7	13	0.0036	0.37	12.0	1.4	2	23	539	561	539	561	0.97
8	13	0.27	28	6.1	0.4	3	21	566	583	565	584	0.85
9	13	0.085	8.8	7.7	3.3	2	19	592	609	591	614	0.90
10	13	0.00012	0.012	16.7	1.8	1	23	625	648	625	648	0.97
11	13	0.26	27	6.2	1.9	2	20	652	669	651	671	0.91
12	13	0.0038	0.4	11.9	0.7	3	23	681	702	679	702	0.95
13	13	0.99	1e+02	4.3	6.3	1	23	708	731	708	731	0.96

Sequence Information

Coding Sequence: ATGTCATTAGAGCTAAAACATTTACTTACGCTTTCGAGCTTCGAATCGAAGCATACCACCATGACTCCCTACCAAGTGATCGTCTACTGCAGGAGCTGCGACGAGTATTCGTTCGGTCAGCCGGACAGCCGCTGGATGAAGTGCAAGTACTGCCGGTTCCAGCTGCTCTACGAGACGACGTGCTGCAACAGGCGCTTCAAGGCGTACACTGCCGCCCTCGAACATGCGCGCATCCTCGCCTGCAAGCGTGATCCGGCCTATCAACTCAAGTGCGTCCACTGCGCCTTCAGAACTTGCATACCCGTCAAGATGCGCCAGCACGCTCTGAACGACGATGCAATAAGTATAACAAATCACGATTATGACAAAGAGAAAATTGAACTTTTCCCAGATGACCTCTGTTACATCGAAATTTCTGACACATCTGAAGACGAAGACAATAAAGATTTTCCAGCCATCGCAATTGAAGTCCCTGATAATACAGTAACACTTCCTGAAGACAGCAAACTTGGGATTAACGAGAGTTGCCGGAATCtaatgaattcaaaaataaataacaacatgGCTAATACGAAACAAGCTCTAGAATCTGGCAAAAATAATGGATTACGTTGCTCGGCGTGCTCTTCAAAAGAAGTTCCAAATCCTAATGGTGCAAAATCTACAAAGTGCTCAAAATGCTTAGattctttaaattatcaatGCTTGAAGTGCAAGAAAAATTTCGATTCATTGAACGAGCTTTTAAAACACAAGGAACAAAAGGATTGCCACCTCGAGGAAAATACTTCTGCAGATTGCAGCGACACCCTTGTATCTAAGACCAGCTTGCTTTCAGCTCTCAAATTAATGTCTGTTAACGATCTTCGCAATAATAGCAAGCCAACTGTTAAAATCGTCTTGAACTCATTTCGCTGTGAGCACTGCGATTGTGTCTTCAGCGATAATGGAAAGCTTACGAGACACGTGAAGCTAAAGCACAGGTATATAGATTGTTCCAAGTGCGGCCAGAAGATCAAATACTTAGAGTTCTCCAAGCACAAGAAAACTATGTGCAAGTCCCAGGTTCAGTTTAAATGCTCATATTGCAATTATCATACAAAGTACCATTGGTACTTGAAAAATCACATGCAACGCAAGCATCGTATAGTGAAAAAGATGAGCCTCAATCTGATGACCAAAGGTCTCTACGTTAGTGAAGCATCCGACAACATCGATCGGACAGCCTCCGGTAACCAAATTTACAAGTGTAAGCTTTGCGGCTACACCTCACCGCACTTGAGATACGTGAAGGGTCACATAAAGAGACGCCATCTCTCGAATGACTTTGAGGAATACGAAAAATATGAGTGCGACTATTGCGGAGCTACCTATAACAACAAGACCAAGCTTCGCAGACACATGAAGCTCAAGCACGTGTACGTCAAGTGTGCCAAGTGTGACAACAGCGTCAAGTTCTTCGAATTCTCAGCGCACCAGAAGAGCGGCTGCCAATCTTTGCCCCAGTACAAGTGCCCAGAGTGCGACTATCGAACCAAGCAGCGCTGGTACCTCAAGTACCACGTGCAACGCAAACACAACATAGACCTGCCGGATGAGTCGCAATTCACTGCTAAGTGCGACATCTGCAACTTCACGGCCGCGAACAAGTCGAAGATGCGCATGCACATGCGTCTAAAGCACGAGCAACGTGCCTGTCCAACCTGCGCGCGCAGCTTCAGGTACCCCAACTACTACCACCACCGGCGTATCTGTGGCAAAGAGGCAACCGTACGTTGCGACTTCTGCGACTTCGTCACCACCAACAACACCTACCTGAAGCGCCACTGCGCGCGCAAGCACGCCGGCAAGGACTTCGAGCAGCACGAGAGCTACAGCTGCGAGCACTGCGACTACGTGAGTAGCAACAAGCCCAGTCTGCGCAGCCACGTGCGCAATCGCCACGTGTACGTTGAGTGTGACAAGTGCTCGAAGAAGTTCAAGTGGTACTGCTTCGCACAGCATCAGCTGCTTTGCGGCTCCCGCAAGGCGTGGATTGCGTGCCGACAGTGCGATGCCACCTTCGCGATGCACACGTATCTGACCAGACACGTGCGCGAGATGCACAAGGCCAGCGGCAAACACAATTGCGAGCATTGTGAATTTAGCTGCTGGCGCAGGTCGCTCATGGTGCGCCATCTGAAGACCGAGCACGCTTGGATCTTCGCCGTCGAACAAATCACCCGCGAGGAGATCCTCAAAGTActgttttag
Protein Sequence: MSLELKHLLTLSSFESKHTTMTPYQVIVYCRSCDEYSFGQPDSRWMKCKYCRFQLLYETTCCNRRFKAYTAALEHARILACKRDPAYQLKCVHCAFRTCIPVKMRQHALNDDAISITNHDYDKEKIELFPDDLCYIEISDTSEDEDNKDFPAIAIEVPDNTVTLPEDSKLGINESCRNLMNSKINNNMANTKQALESGKNNGLRCSACSSKEVPNPNGAKSTKCSKCLDSLNYQCLKCKKNFDSLNELLKHKEQKDCHLEENTSADCSDTLVSKTSLLSALKLMSVNDLRNNSKPTVKIVLNSFRCEHCDCVFSDNGKLTRHVKLKHRYIDCSKCGQKIKYLEFSKHKKTMCKSQVQFKCSYCNYHTKYHWYLKNHMQRKHRIVKKMSLNLMTKGLYVSEASDNIDRTASGNQIYKCKLCGYTSPHLRYVKGHIKRRHLSNDFEEYEKYECDYCGATYNNKTKLRRHMKLKHVYVKCAKCDNSVKFFEFSAHQKSGCQSLPQYKCPECDYRTKQRWYLKYHVQRKHNIDLPDESQFTAKCDICNFTAANKSKMRMHMRLKHEQRACPTCARSFRYPNYYHHRRICGKEATVRCDFCDFVTTNNTYLKRHCARKHAGKDFEQHESYSCEHCDYVSSNKPSLRSHVRNRHVYVECDKCSKKFKWYCFAQHQLLCGSRKAWIACRQCDATFAMHTYLTRHVREMHKASGKHNCEHCEFSCWRRSLMVRHLKTEHAWIFAVEQITREEILKVLF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01467462;
90% Identity: iTF_01467462;
80% Identity: -