Taur016482.1
Basic Information
- Insect
- Torymus auratus
- Gene Symbol
- -
- Assembly
- GCA_900474315.1
- Location
- UXGD01005374.1:5178-10131[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.5e-12 5e-09 36.4 0.0 1 39 329 368 329 372 0.90 2 4 2.6e-11 1.5e-08 34.9 0.0 2 39 384 421 383 424 0.94 3 4 3.6e-18 2.1e-15 56.8 0.0 2 45 439 483 438 483 0.97 4 4 1.2e-17 6.8e-15 55.2 0.0 1 42 490 532 490 533 0.97
Sequence Information
- Coding Sequence
- ATGGGCGTGGGGTCGCTACTGAAGACGGCCGACCAGCTGAAGATAAAGGGCCTGTGCGAGGTCCCGGAGAGCAGGGAAGGCCCCTCGGTGAGCCTGAGTTCACCGCCACGGGACTCGAGTACTCCTCGGGTCAACTTTCACACGAAACTCAAGCGGCATCATCAGCGATACAAAAAGGCTCGCACGAATTTCGAGGCCAACGGGCCGAGcagcaacaataataataaccacaGGGCTCACAATCATCATCAGCAGGATAGGTACAAGGAGGAGGATTACGTCGAGAGCTACGTGAGGGATTGCAATAAGGAGAACCGCCGCGAGTGCTGGCCGGCCGAAGATGACGAGTGCATGGAGACGACAGCGACGACCACAGCAGTAGTCCTGGACTCGTGCCAGCGCAGCAATAGCGCcgggggaggaggaggcggtggtggtggtggtggcggcgaaggaggaggaggtggtggtggtgggagCGCGGATAACAacaacagcggcggcggcgctgctgCCAACAACAACGCCGCCGGCGGCGCCAACTCCACGACGACGAACAACAACGGCGACATGTTCTGTCACACAGGTCTCGGGCATTATGGGCATCATCCGGACCCGGCGGAGGTCGACCTACCGCCGGAGACACAACCAACGCCGCCCAGCGCCACCCTCGTAGGCACGACCATCACTCACCTCAGGGATCCCGATCACCATACGGCAGACATCCAGAGCTGCGACAGCGTGAAGATAAAATTCGAGACGCTGCACACGATGGACTCGTCGGACACGATCGACATCGACAGTCACATGTCCGACCGGGCGAGCGTCAGCTCGAAGAACGCCGACGACAACATGATGATGATAACGCCGGAGCTGCTCGGCCTCATGCCGTCCGGAAGCAGCGTGCACTCCGACTCGGGAGAGAACAATTCGCGCAGTCACTCTGGACAGTCGGGATCGCATCATCATGGTTCCAAGTCCTGGACGCAGGAGGATATGGACGCGGCGCTCGACGCGCTCAGAAATCACGATATGAGCCTCACTAAGGCTTCCGCGACATTCGGCATCCCCTCGACGACGCTCTGGCAGCGCGCGCACCGCCTCGGCATCGACACGCCGAAGAAGGACGGCCCGACGAAATCCTGGAGCGATGAGAGCCTAAACAACGCATTGGACGCGTTGCGCACCGGCACCATATCTGCGAACAAGGCTTCAAAGGCTTTCGGCATACCCTCGAGCACGCTCTATAAGATTGCGAGGCGAGAGGGCATCAGATTAGCGGCCCCTTTCAATGCAAGCCCGACGACCTGGTCACCCGCCGATCTCGATCGCGCACTAGAGGCGATAAGGTCCGGGCAGACGTCCGTGCAGAGGGCGTCGACGGAATTTGGCATACCTACCGGGACGTTGTACGGGAGATGCAAGAGGGAAGGCATCGAGCTCAGTAGAAGCAATCCCACGCCGTGGAGCGAGGATGCCATGACAGAGGCGCTCGAATCTGTTAGattGGGCCACATGAGCATAAACCAAGCGGCGATTCACTACAACCTGCCGTACTCCTCGCTCTACGGGCGCTTCAAGCGCGGCAAGTACGAAGAGCCGGTGGTGAACGAGATGTCGCAGGATGGCTCAGCACAGCACTTCCACCAGAGTCCGACGCCGAACAACCACTCATCCTCGCTGCCCGACCAGATGCCCTACCAGGGCAGCTGA
- Protein Sequence
- MGVGSLLKTADQLKIKGLCEVPESREGPSVSLSSPPRDSSTPRVNFHTKLKRHHQRYKKARTNFEANGPSSNNNNNHRAHNHHQQDRYKEEDYVESYVRDCNKENRRECWPAEDDECMETTATTTAVVLDSCQRSNSAGGGGGGGGGGGGEGGGGGGGGSADNNNSGGGAAANNNAAGGANSTTTNNNGDMFCHTGLGHYGHHPDPAEVDLPPETQPTPPSATLVGTTITHLRDPDHHTADIQSCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNADDNMMMITPELLGLMPSGSSVHSDSGENNSRSHSGQSGSHHHGSKSWTQEDMDAALDALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALESVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNEMSQDGSAQHFHQSPTPNNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00304983;
- 90% Identity
- iTF_01464950;
- 80% Identity
- -