Basic Information

Gene Symbol
Bgb
Assembly
GCA_900474315.1
Location
UXGD01008196.1:8738-9555[+]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-38 2.7e-34 118.9 1.0 2 106 37 133 36 135 0.95

Sequence Information

Coding Sequence
ATGATGCCCACGATGAGTCACCACGCGGCCGCTCTCGGCATCCCCATGATGCCCTACGATGGCATGGGCTACTACGAGCAGCCCAGGCCCAGGTTGCTGTTCAAGATACCGCGAACCGTCCCCGATCAAAAGGGAAAGTTCGATAACGATGAGTTGTTCAGAAAGCTGAGCCGTGAAACTGACGTAAAATACACAGGCTACAAGAACCAGACGCTTGAAGAGCGTCAGGCCCACTTCCGCAACGGCGTGCGCGAGGGCCACGCGGAACTCGCCTTTACTGTGAACGGGACGAACTTGCAGATCTTTTTCAACCCCAATGACCATCACAGCTGCGATTTCAACAAAGAGAGTGATAAGGTAAtcgttaagtttttttttatcaaaatcaatggaatgcatattttttag
Protein Sequence
MMPTMSHHAAALGIPMMPYDGMGYYEQPRPRLLFKIPRTVPDQKGKFDNDELFRKLSRETDVKYTGYKNQTLEERQAHFRNGVREGHAELAFTVNGTNLQIFFNPNDHHSCDFNKESDKVIVKFFFIKINGMHIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01466861;
90% Identity
iTF_01466861;
80% Identity
-