Basic Information

Insect: Tortrix viridana
Gene Symbol: Znf296
Assembly: GCA_963241965.1
Location: OY725198.1:6816843-6830505[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.96 77 4.7 0.1 1 23 126 148 126 148 0.92

2 15 0.0017 0.14 13.4 2.7 1 23 270 292 270 292 0.99

3 15 2.1e-05 0.0017 19.4 0.5 1 23 298 321 298 321 0.97

4 15 0.0011 0.087 14.0 3.7 1 23 326 349 326 349 0.94

5 15 1e-06 8.2e-05 23.5 0.3 2 23 505 526 504 526 0.97

6 15 0.00015 0.012 16.7 3.3 1 23 532 554 532 554 0.99

7 15 0.16 13 7.2 5.4 1 23 606 628 606 628 0.97

8 15 8.3 6.6e+02 1.8 0.0 2 23 636 657 635 657 0.85

9 15 0.0031 0.25 12.5 2.5 1 23 665 687 665 687 0.95

10 15 0.00014 0.011 16.8 1.2 1 23 693 715 693 715 0.97

11 15 0.00059 0.047 14.8 2.1 1 23 724 746 724 746 0.98

12 15 0.00014 0.011 16.8 0.6 2 23 793 814 793 814 0.97

13 15 0.087 6.9 8.0 8.5 1 23 831 853 831 853 0.96

14 15 1.2e-06 9.9e-05 23.2 0.7 1 23 859 881 859 881 0.98

15 15 5.7e-07 4.6e-05 24.3 3.1 1 23 887 910 887 910 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.96	77	4.7	0.1	1	23	126	148	126	148	0.92
2	15	0.0017	0.14	13.4	2.7	1	23	270	292	270	292	0.99
3	15	2.1e-05	0.0017	19.4	0.5	1	23	298	321	298	321	0.97
4	15	0.0011	0.087	14.0	3.7	1	23	326	349	326	349	0.94
5	15	1e-06	8.2e-05	23.5	0.3	2	23	505	526	504	526	0.97
6	15	0.00015	0.012	16.7	3.3	1	23	532	554	532	554	0.99
7	15	0.16	13	7.2	5.4	1	23	606	628	606	628	0.97
8	15	8.3	6.6e+02	1.8	0.0	2	23	636	657	635	657	0.85
9	15	0.0031	0.25	12.5	2.5	1	23	665	687	665	687	0.95
10	15	0.00014	0.011	16.8	1.2	1	23	693	715	693	715	0.97
11	15	0.00059	0.047	14.8	2.1	1	23	724	746	724	746	0.98
12	15	0.00014	0.011	16.8	0.6	2	23	793	814	793	814	0.97
13	15	0.087	6.9	8.0	8.5	1	23	831	853	831	853	0.96
14	15	1.2e-06	9.9e-05	23.2	0.7	1	23	859	881	859	881	0.98
15	15	5.7e-07	4.6e-05	24.3	3.1	1	23	887	910	887	910	0.98

Sequence Information

Coding Sequence: ATGGATCAAAATATGGCAGCAGAAGTGGATCCTCTGAGTACCTACGAATACCCTCAATTCAGTTACCCTCACCTGCAATACAACCACTATCCCTACGATGTGAAGCTCGAACAACCCGTCAATACCATCAACTACGTTAACAATAATATAGCACTCCACCAAAACACTCACTCCAATGATATACTACAGAACATACCTCCAATTAATGATATACCACAAAATATTACGCCTGCCAATGATAGTCAAGTTGATGCGGGGAACTCAAGTAAAACCGAAGATGTGAAGCCATTTTTTGATTTGAgtaaagttaaaaaagaaaGCGGGAAGAAAAGTAGTTATTGGTCGCAAAAAATTACAGACGAAAACTACCCTTTTTACGCTTGTGCGTTATGTAATGTTAGTTATAAGCTGCTTCGGGACCTGGATTCACATTTGGTTGACCATAAAGAAAGATTGACGAGCTATGATTTTAGAATGAAAAACAAACAGAAGAAGAAGCAGATTAAAAAGGAACAGAAGAAGTTAAAGAAGCTCGCGAAAGAGGTTAAACAGGAGGTGGAGATTAAACCGGAAGACGGTTATATTGGTAACGAGAAGACAActgattttgtaaataatactgTTTTAAATGACGCAGGAAATGTAAATAAGGATGATAAATCTGTTAATTTGgatttaaatgttaataatatgaatGATAATGTGAATAAAGAAACGAAGGATCTAAGTAAAGAAGTGGGTAAAGATAAAAGTGTGGAAACGCAAGGCGAGAAAGAAGTGGAGTACAATAAGGACTTGGAGAAGATTTACAAATGTTTCGCTTGCCAGAAGCAGTTTTCGTTGAGTTACTATTTGAAGCTACATGTCCGATCGCACACAGATGAGAAACCATATACGTGCAGCGAGTGCGGACAGTCGTTCATCACGGCGAGTAAGCTCGGCCGCCACAACAAGCGAATCCACCTCGCTATCAAGTACCAGTGCCGGATATGCTATAAGATATTCACTAGATTCGAGTATTTGACTagacattttgataaaaaacACGCCGATGATAAATTAGAAGGGGAGCCATACGATTACAACGCCATCTTGCCATATCTGAAGGAACTAGAGGAGCAGCTGCGTGAAAAAGCCGAGAAGGAAACCAAGCCCAAGACAGAGGATCTGTGGGCGGACTGGCCAGAGGTCGACCAGACTCACTGCCTCGAGGACAGGAAGGACTTCATCGAAGACAAGAAGCCCGTAGACACCTATGCTTTGAACCATTTGGACATCGTGATGGACGACGTTAAGGTTCCAGTGGAAGTGGAAACCTCGGTGGAGGTGAAGTTGGAATTGGAGGCCGAGGAGGCGGCGGCCAGCGACCGCGACGACTCCGACCCTCGCGGCGGCGTCAAGGACGAGAGCATGTCCGACGAAGACTACTTCCCATCCAACACATGGGCGGAGCCGCCCAAGCTGGAAGCGTGCCCCCCCTCCCCCGGCCGGCGGCGGAGGGACGGCCCCCTCACGTGCGACATCTGCGACAAGTCGATAAGCTCCGCGTCGTACCTGCGCATCCACATGCGCACGCACACCGGCGAGCGGCCGTACAAGTGCTTCACGTGCGGCCGCGGCTTCATCACCTCCAGCAAGATGCATCGGCACGTGCTCACGCACACGGACGGCTGGGACAAAGATGGAGTCAAAGAAGAAGTTGACGTGAAAGAGGAAGACAAAAAAGACGGAGAAGATGACGAcACAAAACCAAAAACGAAGCTCAGGAAGAAGCGCAACACGGAGAAGAAGAAGCGCGAGTACCAGAAGAGGCCGCACTCGTGCGAGTTCTGCCAGAAGAGGTTCCTGCATCTGGAGATGTTGCAGGTACACAGAAAGAGCCACTCGGGCGAGAGCGCCGTGCTGCGCTGCCACTACTGCCTGGCCGAGCTGCCCGACGAGCCCGCGCTGCGCGACCACGAGGCTGCGCACGCGcaggccgcgccgcgcccctTCCTCTGCACGCTGTGCGGCAAGCGCTACAAGCGCCGCGAGACCATGGTGTACCACCGCAAGAACCACAAGTCTGAGAAGAAGTTCGTGTGCGACATCTGCTCGAAGACGTTCAACGCGCCGTGCAAGCTGCAGCGGCACATCGTGAGCCACCGCGCCGACAAGTTCGTGCTGCGCTACGAGTGCCCCGTGTGCGCGCACATGTTCAACACCAAGTACCACGTGCAGATGCATCTCGCCACGCACCAGAAGGAGGGCCTAATCCTCGAGGAAAACCGTGGGGACATACTGGCCATGGTGCTGCAGAACGCCCGCAAAATACCCAAACAGGGCTCCACCCCGTCCAACCTCGCCGACCTGATACCGGCCGACGAGCGGAGCCGCGTGTGCAACATATGCGGCGAGGTCTTCCAACACTTCTACTACCTAGAGGAGCACCTGAAGAGCCACGGCTCCCGGATAGCCATCGAAGATGAGAACAAGCAGGAGGAGCGGAAGCACGTCTGCCAGGTATGCCACAAGAGTTTCAAATTACACTACTATTTGAAGCTACACAGCTTCACGCACACTAAAGAGAAACCATACATATGCCAGCAGTGCGGGAAAGGTTTCATCACCAAAGGAAAGTTGAAAAGGCATCTAGAGACCCATACGGGGTTGAAGAAGTACCAATGTCATATTTGCTATAAGTTCTTCACTCGGCCGAGTTATCTCAGGATCCATGTGCGGACGATACACGGAAACCAGGATTATAATTTCAGGGTTGGCAAGGAGTTTGGTATAGCTGGTATAAACGCGCTGTCTGTGATGACGCAGTATAGCGAATAG
Protein Sequence: MDQNMAAEVDPLSTYEYPQFSYPHLQYNHYPYDVKLEQPVNTINYVNNNIALHQNTHSNDILQNIPPINDIPQNITPANDSQVDAGNSSKTEDVKPFFDLSKVKKESGKKSSYWSQKITDENYPFYACALCNVSYKLLRDLDSHLVDHKERLTSYDFRMKNKQKKKQIKKEQKKLKKLAKEVKQEVEIKPEDGYIGNEKTTDFVNNTVLNDAGNVNKDDKSVNLDLNVNNMNDNVNKETKDLSKEVGKDKSVETQGEKEVEYNKDLEKIYKCFACQKQFSLSYYLKLHVRSHTDEKPYTCSECGQSFITASKLGRHNKRIHLAIKYQCRICYKIFTRFEYLTRHFDKKHADDKLEGEPYDYNAILPYLKELEEQLREKAEKETKPKTEDLWADWPEVDQTHCLEDRKDFIEDKKPVDTYALNHLDIVMDDVKVPVEVETSVEVKLELEAEEAAASDRDDSDPRGGVKDESMSDEDYFPSNTWAEPPKLEACPPSPGRRRRDGPLTCDICDKSISSASYLRIHMRTHTGERPYKCFTCGRGFITSSKMHRHVLTHTDGWDKDGVKEEVDVKEEDKKDGEDDDTKPKTKLRKKRNTEKKKREYQKRPHSCEFCQKRFLHLEMLQVHRKSHSGESAVLRCHYCLAELPDEPALRDHEAAHAQAAPRPFLCTLCGKRYKRRETMVYHRKNHKSEKKFVCDICSKTFNAPCKLQRHIVSHRADKFVLRYECPVCAHMFNTKYHVQMHLATHQKEGLILEENRGDILAMVLQNARKIPKQGSTPSNLADLIPADERSRVCNICGEVFQHFYYLEEHLKSHGSRIAIEDENKQEERKHVCQVCHKSFKLHYYLKLHSFTHTKEKPYICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGNQDYNFRVGKEFGIAGINALSVMTQYSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00010421;
90% Identity: -
80% Identity: -