Alat034665.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Acleris laterana
Gene Symbol
Znf296
Assembly
GCA_963966035.1
Location
OZ014464.1:8306320-8321912[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 1.1 1.1e+02 4.7 0.1 1 23 128 150 128 150 0.92
2 13 0.0019 0.19 13.4 2.7 1 23 273 295 273 295 0.99
3 13 2.3e-05 0.0023 19.4 0.5 1 23 301 324 301 324 0.97
4 13 0.0012 0.12 14.0 3.7 1 23 329 352 329 352 0.94
5 13 8.5e-07 8.5e-05 23.9 0.5 2 23 506 527 505 527 0.97
6 13 0.00017 0.017 16.7 3.3 1 23 533 555 533 555 0.99
7 13 0.0043 0.43 12.2 1.6 1 23 666 688 666 688 0.95
8 13 0.00052 0.052 15.1 1.4 1 23 694 716 694 716 0.96
9 13 0.00065 0.065 14.8 2.1 1 23 725 747 725 747 0.98
10 13 0.00028 0.028 16.0 0.8 2 23 794 815 794 815 0.97
11 13 0.097 9.7 8.0 8.5 1 23 832 854 832 854 0.96
12 13 1.4e-06 0.00014 23.2 0.7 1 23 860 882 860 882 0.98
13 13 6.4e-07 6.4e-05 24.3 3.1 1 23 888 911 888 911 0.98

Sequence Information

Coding Sequence
ATGGAACAGAACATGGCCGCGGAAGTGGATCCTCTGAGTACCTACGAGTACCCTCAGTTCAGTTACCCCCACTTGCAATACAACCCCTATCCCTACGATGTCAAGCTTGAACAACCTCTCAATTCCATCAACTACATGAACAATAATATAGCGCTCAACCAAATCACACCGCATTCTAACGATATACCATTAAATATACCTCCAATTAACAATATACCACTTAATAATACACCAGTTAATGATAGTCAAGTTAATGATGCCGGTAACTCCAGTAAAACTGACGATGTGAAACCGTTTTTCGATTTGAATAAGGTTAAAAAGGAGACGGGGAAGAAAAGCAGTTATTGGTCGCAGAAAATTACCGATGAGAACTTCCCTTTTTACGCTTGCgctttgtgtaatgtaagttataagTTACTACGGGACCTGGATTCACATTTGGTTGACCATAAGGAAAGGTTGACGAGCTATGATTTtagaatgaaaaataaaaaaaagaagaagcaGCTGAAAAAGGAACAAAAGAAGTTGAAGAAGCTCTCGAAAGAGGTTAAACAGGAAGTGGAGATCAAACCAGAGGAGGGTTATATCGGTAATGAGAAAGCGGCTGATTTTGTTGACAATGCTTTTTTAAATGATTCCCTTGTAAATAATGAAGCTGATAAAGCTGTTAGTTTAAATGTGAGCAATATTAATGATAAAGTTAAGGATCCAAAGGAGCCAAGTAAAGGGAGTAAAGGACTCGGTAAAGAAGTTAAAGCTGCGGAAACCCAAGGCGATAAGGAGGTGGAATATAATAAGGATTTGGAGAAGATTTACAAGTGTTTCGCTTGCCAGAAGCAGTTCTCGTTGAGTTATTATTTGAAGCTACATGTCCGGTCACACACAGatgagAAACCGTACACGTGCAGTGAGTGTGGCCAGTCGTTCATCACGGCGAGCAAACTCGGGCGGCACAACAAGCGCATCCATCTCGCCATCAAGTACCAGTGTCGGATATGCTATAAGATATTTACTAGGTTCGAGTACTTAACTAGGCATTTTGATAAAAAACACGCCGAAGACAAATTGGAAGGGGAGCCTTACGATTACAACGCCATCTTGCCATATCTCAAAGAACTAGAAGAGCAGCTCCGGGAGAAAGCAGAAAAAGAAACCAAGCCGAAGACTGAGGATCTGTGGGCCGACTGGCCCGAGGTCGACCAGACGCACTGCCTTGAAGACCGGAAGGACTTCATAGAGGACCAGAAACCGGTGGACACGTATGCTCTGAACCATTTGGACATCGTGATGGACGATGTTAAGGCCCCGGTGGAAGTGGAAACGGAAGTCCAGGTGAAGATCGAGGTGGAGCACgagcccgcgccgcccgcgcgcgACTCTGATGACGCCCACGACGTCAAGGACGAAAGCATGTCCGACGAAGACTATTTCCCCTCCAACACCTGGGCGGAGTCCCCCAAGCTGGAGCCCTGCCCGCTGTCCCCGGCGCGCAAGCGGAAGGACGGCCCGCTCACCTGCAAGATCTGCGACAAGTCGATCAGCTCCGCGTCCTACCTGCGCATCCACATGCGCACGCACACCGGCGAGAAGCCGTACAAGTGCTTCACGTGCGGCCGCGGGTTCATCACCTCCAGCAAGATGCACCGGCACGTGTTGACGCACACCGACGGCTGGGACAAAGATGGAGTGAAAGAAGAAGGAGTTGACGTCAAAGAGGAGAACAAAAAAGACGGGGAAGAGGACggCACAACGAATCCAAAGACGAAGGTCAGAAAAAAGCGTAACACAGAAAAAAAGAAGCGCGACTACCAGAAGAGGCCTCACTCTTGCGAGTTCTGTCAGAAACGGTTCCTGCATCTAGAAATGTTACAGGTCCACAAGAAGTGCCACTCGGGCGAGAGCGCCGTGCTGCGCTGCCACTACTGCCTGGCGGAGGCGGCGGACGAGGCGCGGCTCCGGGAGCACGAGGCCTCGCACGCCGGCCCCAAGCCCTTCCTGTGCACGCTCTGCGGGAAGGGGTACAAGCGCCGGGAGACCATGGTGTACCACCGCAAGAACCACAAAACGACAAAGAAGTTCATCTGCGACATCTGCTCGAAGACGTTCAACGCGCCGTGCAAGCTGCAGCGGCACCTCGTCAGCCACCGCGCGGACAAGTTCGTGCTGCGCTACGAGTGCCCCGTGTGCGCGCACATGTTCAACACCAAGTACCACGTGCAGATGCACCTGGCCACGCACCAGAAGGAGGGGCTAATCCTCGAAGAAAACCGAGGCGATATACTAGCCATGGTGCTCCAGAACGCGCGCAAGATCCCCAAGCAgggcgccgcgcccgccgcgctCGCGGACCTGATCCCGGCCGACGAGCGCAGCCGCGTGTGCAACATATGCGGCGAGATGTTCCAACACTTCTACTACCTCGAGGAGCACCTGAAAAGCCACGGGTCCCGCATCGCTATCGAAGATGAGAACAAACAGGAGGAACGGAAACACGTCTGCCAGGTATGCCATAAGAGCTTCAagcttcattattatttaaagttgCACAGCTTCACGCATACGAAAGAGAAGCCGTATATATGCCAACAGTGCGGCAAAGGGTTCATAACCAAGGGCAAGTTGAAAAGACACCTGGAAACTCATACTGGCTTGAAGAAATATCAATGTCATATTTGTTACAAGTTCTTTACACGGCCGAGTTATTTAAGGATACACGTGAGGACGATTCATGGTAATCAGGACTATAATTTCAGAGTTGGCAAAGAGTTTGGTATCGCCGGTATAAACGCTATGTCGGTTATGACCCAGTATGGTGAATAG
Protein Sequence
MEQNMAAEVDPLSTYEYPQFSYPHLQYNPYPYDVKLEQPLNSINYMNNNIALNQITPHSNDIPLNIPPINNIPLNNTPVNDSQVNDAGNSSKTDDVKPFFDLNKVKKETGKKSSYWSQKITDENFPFYACALCNVSYKLLRDLDSHLVDHKERLTSYDFRMKNKKKKKQLKKEQKKLKKLSKEVKQEVEIKPEEGYIGNEKAADFVDNAFLNDSLVNNEADKAVSLNVSNINDKVKDPKEPSKGSKGLGKEVKAAETQGDKEVEYNKDLEKIYKCFACQKQFSLSYYLKLHVRSHTDEKPYTCSECGQSFITASKLGRHNKRIHLAIKYQCRICYKIFTRFEYLTRHFDKKHAEDKLEGEPYDYNAILPYLKELEEQLREKAEKETKPKTEDLWADWPEVDQTHCLEDRKDFIEDQKPVDTYALNHLDIVMDDVKAPVEVETEVQVKIEVEHEPAPPARDSDDAHDVKDESMSDEDYFPSNTWAESPKLEPCPLSPARKRKDGPLTCKICDKSISSASYLRIHMRTHTGEKPYKCFTCGRGFITSSKMHRHVLTHTDGWDKDGVKEEGVDVKEENKKDGEEDGTTNPKTKVRKKRNTEKKKRDYQKRPHSCEFCQKRFLHLEMLQVHKKCHSGESAVLRCHYCLAEAADEARLREHEASHAGPKPFLCTLCGKGYKRRETMVYHRKNHKTTKKFICDICSKTFNAPCKLQRHLVSHRADKFVLRYECPVCAHMFNTKYHVQMHLATHQKEGLILEENRGDILAMVLQNARKIPKQGAAPAALADLIPADERSRVCNICGEMFQHFYYLEEHLKSHGSRIAIEDENKQEERKHVCQVCHKSFKLHYYLKLHSFTHTKEKPYICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGNQDYNFRVGKEFGIAGINAMSVMTQYGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01464381; iTF_00009333;
90% Identity
iTF_00009333;
80% Identity
-