Tvir021327.1
Basic Information
- Insect
- Tortrix viridana
- Gene Symbol
- -
- Assembly
- GCA_963241965.1
- Location
- OY725192.1:3609886-3638046[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-10 3.2e-06 27.4 0.1 4 86 44 130 42 153 0.81
Sequence Information
- Coding Sequence
- ATGCGTATGTGCTATGAGAGGCCCGGCCTGGTCACCGCCCTGAACGGCGCCGTTGGGTACGACAAGTGGGACCGCGACCGCGACCGCGGCGGTGGCGCCGGCGGCGCGCCCGGCGCGTGGGCGGGCCGCGACCGCGAGCGCGACCGCGAGCGCGAGCggcaggcgcgcgcgcaccaGATGTCGCAGTCCCACGCCGCAGAGCCGGACGCCACCGCCTCGCTCTTCCAGGCACCATCCAGgGTGACGGGCAACAAAGACCGCCAGAGCCAGCAGATCCAGACGAAACTCGGCGACTACCAGATTGCGCAGGCCCTGATCGACGATCCCAGCAAGTCGATCGGCATTTGCGCAGAACCACAGAGCCCGGCGCCATTGTGCCTCCCGAAACGCCCGCCGGCGTCGGGTCGGGCGGTCGGCCACTCGTCGCGTCACAGTGACGAAACGCCGCCCGACCGTCACGAGTGA
- Protein Sequence
- MRMCYERPGLVTALNGAVGYDKWDRDRDRGGGAGGAPGAWAGRDRERDRERERQARAHQMSQSHAAEPDATASLFQAPSRVTGNKDRQSQQIQTKLGDYQIAQALIDDPSKSIGICAEPQSPAPLCLPKRPPASGRAVGHSSRHSDETPPDRHE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00462400; iTF_00009036;
- 90% Identity
- -
- 80% Identity
- -