Tvir019541.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tortrix viridana
Gene Symbol
APOD
Assembly
GCA_963241965.1
Location
OY725189.1:10335136-10359883[-]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.067 9.7e+02 -0.0 0.1 55 112 412 469 403 475 0.86
2 5 0.0012 17 5.7 0.1 55 113 771 829 764 837 0.89
3 5 0.001 15 5.8 0.0 55 113 1130 1188 1123 1196 0.89
4 5 0.00098 14 5.9 0.0 55 113 1489 1547 1482 1563 0.89
5 5 0.0042 61 3.9 0.0 62 113 1855 1906 1841 1921 0.84

Sequence Information

Coding Sequence
ATGAGTAGGATCGGTCAGGAGGTTATGGAGTTAGAGGGCTCTGCTGGGGGCGAAGAAATCAAGCCTGAACCTGTAACCATACTTACGCGGCGACGAGACGACGTGGTTAGACTGTTCCTTGGCACCTGGTACGAAGTGGGCAAAGCATCGAGCCAGAATGCCGACTGCTCGAACCTGGAGTTTGCCCAAACCGACGCAAGCATTACTTTCACTGACACTTCAGTGGTTAACAACTTCCAGCGAATTGTCACTGGTACTGCCACTCAGAGCGGCACTGCCGAGCTGACCTTAACACCGGCATCAGCTACTCCAACTCAGTTTTCGATTCTCAGCACAGACTATAGCAGCTACGCCATAGCTATTAACTGCGTCGATATATCAGCCACACAGCGAACTATAAACGTATGGCAATTGGGAAGGGCAGCAAACTCCTTTGACAATGCAGCAACCTTACAACTGGCCAATACGGCTCTCGCGACCATTGGGCTCAGTGTGAGCGACTTGCAAACCATCGACCATTCTACCGCCGCATGCACGACACTGCCCGTGATTGGCGCTGGCCAGCCAGTTATATTGCCTGGACAATGCAGCACCACCCTCAACGCCGTGTCAGACTTCCAAGTGGCTGATTTCACAGGAACGTGGTACGAGGTTTCTAGTTACTATTCTGCGAATGCGGTTGGTACCTGCGCGCGGGCAGACTACACGCTAGTGGGATCGACTGTGAACGTGGTAAACAGCCAAGTCCTCAATCAGCGCCTGGACACCATCAACGGAACAGCTACTGTCGCTAGCACCGACGGCTCCGGAAGATTAAACGTTATTTTGAATGTCCAAGGAATCCCTATTGAGCAAGAGCTGTATGTTCTTGATACTGACTACACTGGATACGCCGTTTCCTACACCTGCGTTAACGTTGGTACCACCCAGAGACAAGTAAACAGCTGGATTCTCAGCAGAACTCAACAGATAAGCGCTGCATCTCAAACTGAAGTCAACCGCGTCATCAACTCTTTCCTCGACCTCAATACCGAGTACTTCGAAGATACTCCACAAACTGATGACGCCTGCTTCTACTTCCCTGAAGCAGTTACCGGCATGCCTGTGGTCTTCCCTGGACAGTGTGACGAAAACGTCAATGCTATCAGCGGTTTCAACTTGGTTTCGTTCACAGGCACATGGCACGAAGTCGAAGCCTATCCGAAAGAGCAACAGACCGGGACTTGCGTGAACCACGCGTTCACCGCCAGTACCACCGCCAACACCCTCAACCTCGTCTCCAACCAAGTTGTCAACCAACTTGCCACTTCATCCAGCGGCAGTGTCGTTGTGGCGTCGACCGACGGAAGCGGAAGGTTACAGCTTACCATGGTGGTCAACGGGCAAACCATCACCTTCCCCTACTGGGTTTTGGACACCGATTACAGCACTTACGCACTGGTGTACAGTTGCATAAACCGCGGTGATAACACCAGATCAGTACACAGCTGGAAATTGAGTAGGACCCAAAGCCTACCAGCAGCAGCCGTCACGGCCATCAACACCGCTATGGCAGCAGTCCAAGTCCTTGAGAACGAATACTTCGAAACAATTGACCAGTCTGCTGCAGGTTGCTTCGCTTACCCCGAAATTCCTGCTGGCAACCCCATCATATTGGATGGACAATGTGAATCGGTGACACCCATTGCCAACTTTCAAGTTGCCAATTTCGTAGGAACCTGGCACGAGATCTCTAGCTACTATTCGGAGAGTGCTGTCGGTACGTGCGCACGGGCAGACTATACACTAGTGGGATCGACGGTGAACGTGGTGAACAGCCAAGTCCTCAACCAGCGCCTGGACACCATCACTGGAACTGCTACACTCGTGGGCACCGACGGCTCTGGAAGATTAAGTGTAACTTTGGATGTCCAAGGAATCCCTATTACTACAGAACTGTTAATTCTTGAAACGGACTATACTGGATACGCTGTTTCCTACTCGTGTGTCAACTTTGGAAATAACCAGAGACGAGTTTACAGTTGGATTCTTAGCAGAACACAACAAATTAGTGCTGCATCTCAAACTGAAGTCAACCGCGTCATCGACTCCTTCCTCGATCTGAACTCCCAGTACTTCCAAGCTACTCCACAAACAGCTGAGGCTTGCTTCTACTTCCCTGAAGCCATACCTGGCACGCCAGTGGTCTTCCCCGGACAGTGTGATAATAGCGTCAATGCTTTAAGCGGATTCAACATGGCTTCGTTCACAGGCACATGGCACGAGGTCGAAGCCTATCCAAAAGAGCCACAGACTGGGACCTGCGTGAACCACGCATTCACAACCAGTACAACCGCCAACACCCTTAACCTTGTCTCCAACCAAGTGGTCAACCAACTTGCCACTTCATCCAGCGGCAGTGTCGTTTTCGAGTCGACGGACGGAAGTGCCAGGTTAACACTCACTATGGTGGTCAACGGACAAACCATCACCTTCCCTTACTGGATTTTAGCGACCGACTACAACAGTTACGCTCTGGCGTACAGTTGCATCAACATCAATGAAAATTTCAGATCGGTCCACAGCTGGAAGTTGAGTAGGACCCAGACACTGCCTGCAGCAGCCGTCACTGCCATCAACACCGCTATGGCAGCAGTCCAAGTCCTAGAGAACGAATACTTCGAAACAATTGACCAGTCTGCTGCAGGTTGCTTCGCTTACCCCGAAATTCCTGCTGGCAACCCCATCATATTGGATGGACTATGTGAATCGGTGACACCTATTGCCAATTTTCAAGTTGCCAATTTCGTAGGCACTTGGCACGAGATCTCTAGCTACTATTCGGAGAGTGCTGTCGGTACGTGCGCACGGGCAGACTACACACTAGTGGGATCGACGGTGAACGTGGTGAACAGCCAAGTCCTCAACCAACGCCTGGACACCATCACTGGAACTGCTACACTCGTGGGCACCGACGGCTCTGGAAGATTAAGTGTAACTTTGGATGTCCAAGGAATCCCTATTACTACAGAACTGTTAATTCTTGAAACTGACTACACTGGATACGCTGTTTCCTACTCGTGTGTCAACTTTGGAAATAACCAGAGACGAGTTTACAGTTGGATTCTTAGCAGAACACAACAAATTAGTGCTGCATCTCAAACTGAAGTCAACCGCGTCATCGACTCCTTCCTCGATCTGAACTCCCAGTACTTCCAAGCTACTCCACAAACAGCTGAGGCTTGCTTCTACTTCCCTGAAGCCATACCTGGCATGCCAGTGGTCTTCCCCGGACAGTGTGATAATAGCGTCAATGCTTTAAGCGGATTCAACATGGCTTCGTTCACAGGCACATGGCACGAGGTCGAAGCCTATCCAAAAGAGCCACAGACTGGGACCTGCGTGAACCACGCATTCACAACCAGTACAACCGCCAACACCCTTAACCTTGTCTCCAACCAAGTGGTCAACCAACTTGCCACTTCATCCAGCGGCAGTGTCGTTTTCGACTCGACGGACGGAAGTGCCAGGTTAACACTCACTATGGTGGTCAACGGACAAACCATCACCTTCCCTTACTGGATTTTAGCGACCGACTACAACAGTTACGCTTTGGCGTACAGTTGCATCAACATCAATGAAAATTTCAGATCGGTCCACAGCTGGAAGTTGAGTAGGACCCAGACACTGCCTGCAGCAGCCGTCACTGCCATCAACACCGCTATGGCAGCAGTCCAAGTCCTAGAGAACGAATACTTTGAAACAATTGACCAGTCTGCTGCAGGTTGCTTCGCTTACCCTGAAATTCCTGCTGGCAACCCCATCATATTGGATGGACTATGTGAATCGGTGACACCTATTGCCAATTTTCAAGTTGCCAATTTCGTAGGCACTTGGCACGAGATCTCTAGCTACTATTCGGAGAGTGCTGTCGGTACGTGCGCACGGGCAGACTACACACTAGTGGGATCGACGGTGAACGTGGTGAACAGCCAAGTCCTCAACCAACGCCTGGACACCATCACTGGAACTGCTTCACTCGTGGGCACCGACGGCTCTGGAAGATTAAGTGTAACTTTGGATGTCCAAGGAACCCCCATTACAACAGAATTGTTAATTCTTGAAACTGACTACACTGGATACGCTGTTTCCTACTCGTGTGTCAACTTTGGAAATAACCAGAGACGAGTTTACAGTTGGATTCTTAGCAGAACACAACAAATTAGTGCTGCATCTCAAACTGAAGTCAACCGCGTCATCGACTCCTTCCTCGATCTGAACTCCCAGTACTTCCAAGCTACTCCACAAACAGCTGAGGCTTGCTTCTACTTCCCTGAAGCCATACCTGGCACGCCAGTGGTCTTCCCAGGACAGTGTGATAATAGCGTCAATGCTTTAAGCGGATTCAACATGGCTTCGttcACAGGCACATGGCACGAGGTCGAAGCCTATCCAAAAGAGCCACAGACTGGGACCTGCGTGAACCACGCATTCACAACCAGTACTACCGCCAACACCCTTAACCTTGTCTCCAACCAAGTGGTCAACCAACTTGCCACTTCATCCAGCGGCAGTGTCGTTTTCGACTCGACGGACGGAAGTGCCAGGTTAACACTCACTATGGTGGTCAACGGACAAACCATCACCTTCCCTTACTGGATTTTAGCGACCGACTACAACAGTTACGCTCTGGCGTACAGTTGCATCAACATCAATGAAAATTCCAGATCGGTCCACAGCTGGAAGTTGAGTAGGACCCAGACACTGCCTGCAGCAGCCGTCACGGCCATCAACACCGCTATGGCAGCAGTCCAAGTCCTAGAGAACGAATACTTCGAAACAATTGACCAGTCTGCTGCAGGTTGCTTCGCTTACCCTGAAATCCCTGCTGGCAACCCCATCATATTGGATGGACTATGTGAATCGGTGACACCCATTGCCAATTTCCAAGTTGCCAATTTCGTAGGAACTTGGCACGAGATCTCTAGCTACTATTCAGAGAGTGCTGTCGGTACGTGCGCACGGGCAGACTACACACTAGTGGGATCGACTGTGAACGTAGTGAACAGCCAAGTCCTCAACCAACGCCTAGACACCATCACTGGAACTGCTACACTCGTGGGCACCGACGGCTCTGGAAGATTAAGTGTTACTTTGGATGTCCAAGGAATCCCCATTACTACAGAACTGTTAATTCTTGACACTGACTACACTGGATACGCTGTCTCCTACTCTTGTGTCAACTTTGGAATTAACCAAAGACGAGTATACAGCTGGATACTCAGCAGAGCACAACAAATTAGCGCTGCATCTCAAACTGAAGTCAACCGCGTCATCGACTCTTTCCTCGATCTGAACTCCCAGTACTTCCAAGCTACTCCACAAACAGCTGAGGCTTGCTTCTACTTCCCTGAAGCCATACCTGGCACGACAGTGGTCTTCCCCGGGCAGTGTGATGACAGCGTCAATGCTTTAAGCGGTTTCAACATGGCTACGTTCTCAGGCATTTGGCACGAGATCGAGGCCTATCCCAAAGAGCAACAGACTGGGACTTGCGTGAACCACGAATTCACAACTGGCACCACCGCCAACACTCTCAACCTCGTCTCCAACCAAGTGGTCAACCAACTTGCCACTTCATCCAGCGGCAGTGTCGTTTTCGACTCGACGGACGGAAGTGCCAGGTTAACACTCACTATGGTGGTTAACGGAcaaacGATCACTTTTCCGTACTGGATTTTGGCCACCGACTACAACAGTTACGCTCTGGCGTACAGCTGCATCAACATCAATGAAAATTCCAGATCAGTCCACAGCTGGAAGTTGAGTAGAACCCAGACACTGCCAGCAGCAGCCATCACGGCCATCAATACCGCTATGGCAGCAGTCCAAGTACTGGAGAACGAATACTTTGAGACCATTGGACAGACCGAAGCAGCCTGTTTAGCGTATCCCGACATCCCTGCTGGCGAACCCATCATTCTGCAAGGGCAGTGTGGAACTGTTACACCTGTGACTAATTTCCAGGCTGATAGCTTTGCCGGCACTTGGCATGAGACTGCCCGCTACGCATCGGAGCGTCAGTCCGGTAACTGTGCTGCCCAGAATTTCACTACTGCTGGACAAAATAGCTTCACCTTGACCCAGACCATTATCTACAACGAGCGGCTGACCACTGTAACTGGTCAGGCTACCCTGGCTGTTGATGGCACTGGCGTGCTCACTGCCACCTTTAGCAATGGAGCTGGCCTGTCTTATACTTCAACTATATACATTTTGGACACCGACTACGATGAATTTGCACTATTATACAGTTGTGATAACATAGTAGGAACTACTAACCGGCAAAtcTACAGTTGGAAGTTAAGCAGATCACAAGAAGGTCTTTCGCAAGCGGCCAATGACAGAATATCTCAAGTGATTACAAATAACATTGACCTCCTTGAGCACTATTACCAGACAACTGGACAAACCAACAACGATTGTTTCTACTACCCGGTATTTGAAGAGATTCCTGAATCTATTATTCTACCAGGAGCCTGCCCACCCATCACTGGAAAGGCTAACTTCAATCCTGCTGCATACCTAGGCGCCTGGTTTGATGTGGCTAACTACCCCATCAATTCTCAAAACGGCACTTGCTCACGCGCCGAATACTCCCTTGTCGATGGCGTTATCACTATTCGCAACACTATGGTTGTTGATGGAGAGCTGAAAACCCAGATGGGAATTGCTCGTCTTTCTTCGACTGGAACGGGACTTTTGACGGTCAACTTTATTCTGGAAAATGGAGagGAAGTCGTGACCACATATTACATTCTTGAATCTGATTACACTAGCTTCTCCCTAGTTTACAATTGTCGTAACCTACCGGACGGAAATAGACAGGTATTCAGTTGGAAACTCAGCAGGACACCAGCACTCACTGCTGAAGCCAGCATCGCTATCAATAACGTCATCAGCAACACTGAAGGTCTCCTCGAAGAGTACTATTTGTCAACCAGCCAGTCTGCTGAGGACTGCTTCTACGTACCAGATTTTGAACCTGGACAGTCAGTGCTTTTCAGAGGATCATGCGAAGCAATCACTGGCATGCAACGATTCGATGTTAACCGGTACCTTGGCTGGTGGCACGAAATTGAACGGTACCCCAGTGATGCCGCTCCTGGACAGTGCACCAGCTCCAGCTTCATGCAGGTTGGCAATGGCATCCGAGTGGTGGAAACCAGCGTAGAAGGCGGTGTGGGCTCGGAAGTGACAGGAGATGTTGTTGCTGCGGCTGATGGCACAATTACTATCTACAGAGACGACAGGCAAATTGtctGGACCGTGCTTGATACAGACTACGACTCTTACTCACTTCTTTACTCTTGTGAAACCGTTGTTACAAACTGGGGTCCCTACAGGCGAGTATGGAGCGCTAAACACAGTAAAGCAAGGTCTCTAACGCAAGCGGCCATTAACGCTATGAATTCCACTATCACATCTAACGACCTACTGCACGAGCATCTCTACGAAACCGTAGATCAGTCTGACTTGGCCTGCTTCCACTACAAAGAGGAAGCTGGAGAACAAGTCATCATGTCTGGTCAATGCGATACTGGAATCCCGGTTCAAGAAGACTTTGATATTTCTCAGTTCGCTGGCATTTGGTACCAGCTCGAACGGTACCCATATCCTCAAGTGAGCAACGAAGGCACATGCGTCGGAGCCCGTTACACCGTCAACGGTGACACCATCAACGTCCAGAACTGGGAACTTCTCGATGGAACTCTTAACACGATCCAAGGATCAGCAACAGTTGATGCTGCATCAGCCACCTTAACTGTATCTCTCCCTGTAGCGGATAGTGAAGaAACAACTACAATGAACCTGCGAATTTTGGCCACTGACTATAACAGCTATGCTCTGGCGTACACTTGCATCAACATTAATGAATTCCAGAGAGCAGTTGGTGCCTTCAAACTCAGTCGCAACCGTGTGATGTCCAACGAAGGTCAATACGCTATTGAGGCATACATGGCCGACAGAGAAGAGCTCCACCAGCCGTTCTTTATCACTGTCGACCATGACGACCAGTGTCTAGAGCCCAGCTCAGCTTTGCTGGTCAAAAGCAGTATTATAATTATGCTAGTCTCCATTGCAATTCATTTAGTTACGTAA
Protein Sequence
MSRIGQEVMELEGSAGGEEIKPEPVTILTRRRDDVVRLFLGTWYEVGKASSQNADCSNLEFAQTDASITFTDTSVVNNFQRIVTGTATQSGTAELTLTPASATPTQFSILSTDYSSYAIAINCVDISATQRTINVWQLGRAANSFDNAATLQLANTALATIGLSVSDLQTIDHSTAACTTLPVIGAGQPVILPGQCSTTLNAVSDFQVADFTGTWYEVSSYYSANAVGTCARADYTLVGSTVNVVNSQVLNQRLDTINGTATVASTDGSGRLNVILNVQGIPIEQELYVLDTDYTGYAVSYTCVNVGTTQRQVNSWILSRTQQISAASQTEVNRVINSFLDLNTEYFEDTPQTDDACFYFPEAVTGMPVVFPGQCDENVNAISGFNLVSFTGTWHEVEAYPKEQQTGTCVNHAFTASTTANTLNLVSNQVVNQLATSSSGSVVVASTDGSGRLQLTMVVNGQTITFPYWVLDTDYSTYALVYSCINRGDNTRSVHSWKLSRTQSLPAAAVTAINTAMAAVQVLENEYFETIDQSAAGCFAYPEIPAGNPIILDGQCESVTPIANFQVANFVGTWHEISSYYSESAVGTCARADYTLVGSTVNVVNSQVLNQRLDTITGTATLVGTDGSGRLSVTLDVQGIPITTELLILETDYTGYAVSYSCVNFGNNQRRVYSWILSRTQQISAASQTEVNRVIDSFLDLNSQYFQATPQTAEACFYFPEAIPGTPVVFPGQCDNSVNALSGFNMASFTGTWHEVEAYPKEPQTGTCVNHAFTTSTTANTLNLVSNQVVNQLATSSSGSVVFESTDGSARLTLTMVVNGQTITFPYWILATDYNSYALAYSCININENFRSVHSWKLSRTQTLPAAAVTAINTAMAAVQVLENEYFETIDQSAAGCFAYPEIPAGNPIILDGLCESVTPIANFQVANFVGTWHEISSYYSESAVGTCARADYTLVGSTVNVVNSQVLNQRLDTITGTATLVGTDGSGRLSVTLDVQGIPITTELLILETDYTGYAVSYSCVNFGNNQRRVYSWILSRTQQISAASQTEVNRVIDSFLDLNSQYFQATPQTAEACFYFPEAIPGMPVVFPGQCDNSVNALSGFNMASFTGTWHEVEAYPKEPQTGTCVNHAFTTSTTANTLNLVSNQVVNQLATSSSGSVVFDSTDGSARLTLTMVVNGQTITFPYWILATDYNSYALAYSCININENFRSVHSWKLSRTQTLPAAAVTAINTAMAAVQVLENEYFETIDQSAAGCFAYPEIPAGNPIILDGLCESVTPIANFQVANFVGTWHEISSYYSESAVGTCARADYTLVGSTVNVVNSQVLNQRLDTITGTASLVGTDGSGRLSVTLDVQGTPITTELLILETDYTGYAVSYSCVNFGNNQRRVYSWILSRTQQISAASQTEVNRVIDSFLDLNSQYFQATPQTAEACFYFPEAIPGTPVVFPGQCDNSVNALSGFNMASFTGTWHEVEAYPKEPQTGTCVNHAFTTSTTANTLNLVSNQVVNQLATSSSGSVVFDSTDGSARLTLTMVVNGQTITFPYWILATDYNSYALAYSCININENSRSVHSWKLSRTQTLPAAAVTAINTAMAAVQVLENEYFETIDQSAAGCFAYPEIPAGNPIILDGLCESVTPIANFQVANFVGTWHEISSYYSESAVGTCARADYTLVGSTVNVVNSQVLNQRLDTITGTATLVGTDGSGRLSVTLDVQGIPITTELLILDTDYTGYAVSYSCVNFGINQRRVYSWILSRAQQISAASQTEVNRVIDSFLDLNSQYFQATPQTAEACFYFPEAIPGTTVVFPGQCDDSVNALSGFNMATFSGIWHEIEAYPKEQQTGTCVNHEFTTGTTANTLNLVSNQVVNQLATSSSGSVVFDSTDGSARLTLTMVVNGQTITFPYWILATDYNSYALAYSCININENSRSVHSWKLSRTQTLPAAAITAINTAMAAVQVLENEYFETIGQTEAACLAYPDIPAGEPIILQGQCGTVTPVTNFQADSFAGTWHETARYASERQSGNCAAQNFTTAGQNSFTLTQTIIYNERLTTVTGQATLAVDGTGVLTATFSNGAGLSYTSTIYILDTDYDEFALLYSCDNIVGTTNRQIYSWKLSRSQEGLSQAANDRISQVITNNIDLLEHYYQTTGQTNNDCFYYPVFEEIPESIILPGACPPITGKANFNPAAYLGAWFDVANYPINSQNGTCSRAEYSLVDGVITIRNTMVVDGELKTQMGIARLSSTGTGLLTVNFILENGEEVVTTYYILESDYTSFSLVYNCRNLPDGNRQVFSWKLSRTPALTAEASIAINNVISNTEGLLEEYYLSTSQSAEDCFYVPDFEPGQSVLFRGSCEAITGMQRFDVNRYLGWWHEIERYPSDAAPGQCTSSSFMQVGNGIRVVETSVEGGVGSEVTGDVVAAADGTITIYRDDRQIVWTVLDTDYDSYSLLYSCETVVTNWGPYRRVWSAKHSKARSLTQAAINAMNSTITSNDLLHEHLYETVDQSDLACFHYKEEAGEQVIMSGQCDTGIPVQEDFDISQFAGIWYQLERYPYPQVSNEGTCVGARYTVNGDTINVQNWELLDGTLNTIQGSATVDAASATLTVSLPVADSEETTTMNLRILATDYNSYALAYTCININEFQRAVGAFKLSRNRVMSNEGQYAIEAYMADREELHQPFFITVDHDDQCLEPSSALLVKSSIIIMLVSIAIHLVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-