Talt001672.1
Basic Information
- Insect
- Tortricodes alternella
- Gene Symbol
- egg
- Assembly
- GCA_947859335.1
- Location
- OX401975.1:15401481-15437568[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-10 4e-07 29.9 0.0 4 74 1609 1672 1606 1675 0.89
Sequence Information
- Coding Sequence
- ATGAGTGCCGACGACCAGGGAGATAATTTAAGACTTAACAAAGAAGAAGAACCCTGTACCTTTGACGATACACCAGTAAATCCGAAGGATTTTGCAAAGATTCAAATGGCCAACTCTAGTCTTCCAAAGGACGATGGCGACCCAAACACAGATCCAGGGACTATTGATGATCCTTCGAACCGAATACTAGAAGCTTTTGATGCAGACGTAGAAGCAGTAATTGAGAAAAAACTTAATCTAGCTGACAAAGAGAAAGCTGATGTTGACAGTGAACTTGATTTTGAGCTCAAATACGAAGAAGACGCTGATGAAGATCAAGCCGAAATGGATTCTGCTGCAATGCTTCCTAATGATGAGCCTGATAAATCGGAAAGTAATATAGCAACAGAATTAGACAATGTTGGTGAGCCTGATAAAACAGAAAGTAATGTAGCAACAGAATTAGACAATGATGATGAGCCTGATATAACAGAAAGTAATGTAGCAACAGAATTAGACAACATTGATGAGCCTGATAAAGTAGAAAGTAATGTAGTAACAAAAGTAGACAATGTTGATGCGCTTAAAATAAATGAGCAACAAGTTGATGACATGACTACAAATAACTCAAATAACAAAGAGTTAGCAGATGCTGAAAAGCTTGTTGATACCATATTTGAAATAGACACATATACAAAGACAGATCTAGCAAGTGAGATATCGCCAGTGGAGTCAGAGACTACTTCATTAGATGAGCATCTAATCTATTCTGATATGGATGTACCTGACATAGAAGATAAAGATTTAATTGATGAAATTGATGCACAAATAATGGAGACGGAAAAGAAATCAAATAGTGAAATATTTGATGATAGAGGAAGTAAAAGTCCCACAACTTTGCCTGAAGACATTCAAAAGACATCTAATCCAGGCAGCTCATGCAAACAAGATGTTGACAGTACTGTGATGGATATTGATGATGACTTAATGAAATCAATCACTGTAATGGACAAGTTCAATATAAAGGAAAAACAAGATAATCTTAGTATTGTGATGGATGTTGATGATGACTTAACAGAATCAATCACTTTAAAAGATGAGATCATTGTAAAGGAAGAACAAGAGATTCTTAATGACACAATTTCATCTAGTAATGACATTGATACTTCAGTATTTGAAATCAATAACGAACATGGGTTGACTAAACCTGATGTGATGATTGAAATACCTACTCAAGAATTAATTGAGTCATTTGATGATTCTGGAGAAATGTCTGATGAAGCAGAGCAATATGATGAACATGTATTATCAAATAATGACAAAACAAATGCAAAAAATATTGTAACTGATGTTATTCAAAGTGCAGAAGTCAGTACAAATGAATATGACGTTATTAAAGAAAAAACTATTTTAGATGAAGTAAATGTAAGTGATACAAAAACCCTGGCAATTGTATCTAAAGATGACAAAGTTGATATTGCAAAAAAATCAAGTAAACAAACAGGTGATAAACTGGTCACAGAGAGTATTGCAATTGAGAATAAAACTGCTTCTGAAATAATGGAAAAAATAGAAATTGTGAATAAATCTGAGAACGGTAATTCTGATAAAGCAGAAACAACAAAACTAGATCAAGGTAAGATAGAAAATAAAGACAAAGAAAATATTGCTGATATTGTTTTAGAAACTACAAATTTAGAACCAAAACAAATCATAGGTGAAATAGACAACTTAGAGCCAAACATCGTCACAGAAACAGAACATATCAATTCTCCTGATAAAATAGATTCAAAAAATGAAACAGAAGCAAAAGAGGCCACTTCTGCTGCTGGATTGGAGCACAAAGCAGTGGGATGTGAAGAAAATATCTCTCCAGATACTGTAGAATCAGAAGTACTCTTAAAAGCTAAAGATGACAGTTCTTATAATGATTCAAAAACCAAAGACATCAATGAAACACCCACCACTTCTACAAATGAAGCACAGCCATCAACTTCAAAGTATTTGCTTCAAGAATTGTCTGATGAAGACCAGGAAGTGACTGATAGTCTTGGATTGTTAGCCGAGTCTTCTCGGGTGATGGATGATGATGATGAACAGGAACAGGACCAGGACCAGGAAGAAGATGACGAAGATGATGACTTTGATCAGGATGATGAAAGCAACCAAATGACAGCGGAGCATTCTGAGGACTCGAACGCCCAGCAATCTGAGTCTGATGTCCCTCGAGAGGCAGTGGGGTTAGAAGAATCCCCTTCCACTGATAAGGAGGCATTCGAGTTCCAAATTGGAGAGGTTACGAGTGAGAAAGATGATAATACTCTGGATGATTATATGGCTGAAGAAAGCAATGAAGCTGATGTCAATGAAGTGGAGAATGCTGTGCAAGCGCTGCTTGGAGAAACCCGGGCTGAGGAAGAACCAGCAGCTGATGTGTCACCAGCAGCCGAAAGCGCCGAAGAGGACACTGTCAAATTGTCAGAAGATGACAATCAAGATGTCGGAACAGAGGAAGAAGCCAGCAAGCTCCGGAAACTGCTGCTTAAAGATAAAGACACCGCCGTTTCAACTACGGTGGAAGAAACATCGCCGTCGAAAATGAAGAAGTTAGAAGTAGCCAAGCCGAAACATGAATTCAATATCGTCGATTTGGAAGAGAGCTCGTCGGAAGACGATATCCAAGAAGTGAACAAGGAGCCGGCCGAGCCCGCCGAAAAGTCCCAGGGCGAGGTGAGCGTGAACATCCCCGAGGAGGTGGAGGTGATGTCGGCGTCGAGCGGCGCCACCACGGGGCTGCGGCGCGGCGCGGGCGAGTACGTCATCAGCGTGCCCAAGCCGCCGCCCGGCAAGCCGGCAAGACTGAACACGAGTGAAGTAACCATCAAGACTGCCTCAGTGGCGACGGAACCCCTCGCCATCACAGAATCAACGAGCTCAACTCAAGACAAAGCACCACTCAAGTTCGGTCTCGAGATCTTCAGCTTGGACTCTGATGACGATGAGAAGGCTGCTGATCCACCAGCAAAGAAACTAACAGCGGTGGAAGTTGAGCGCGCGCGCGAGAGCAACAAGTGCATCAACATGTTCTGCAGCGGCGACGGCGCAGGGCCGCTGCTGCCGGCCGACGCGCGCTGCGCCGCCTACTACAACAGCGCGCACCGCGGCGCCGTCTGCCTCCCGTGCGCGCTGGCGGTCGCTGCGCGCACGCAGAATCTCATAGATGGCGTCAAAGATTTCAGCCCTCTCCTGAAACTAGACATGGGGCAGACTCGCGAGGAACTGGTCGAGATCTCAGACTCTGATTCTGAGGACGAGCCGGAGGTTGTTAAGGCGGCCGATGACGTTATAGGCGAGGCCGGAGCCAAGTTCCTTGAAGAGAATCTCGCGGACATGTTCAACGAGACGTGGCGGAAATACAACATGGACGCGCGCCTGCTGGAGGCGCAGGCCGAGCTCGACCAGGACGTGAGGAAACTGGAAGTGGAATGCACTGAGATTGACGCAATGCTGAGCGATTGTCAAGCCGCCACGGACCGTCTGCGCCGCGAGCTGTACGATTCGTTCGCTCATGAACGGAAGGAGCTGCCCGCCATCTTGATTTACGACACGCCTCCGAGCGCGAGTCGTCAGAGCAAGCGGCGTCTGCCAGCCGAAGTGGAACCGCCGCCGAAGCGGCCTGCCATCCCTCTCGGATACGCCCCGCTAGACAGTGACGCCACTACTACGCAGAGCGAACCGAAACCACCCGCGCCCGTCGTAACCGATGTCGCGGTTCCAAATGACGACGATAACGCGGACATCTCGGTGGTGAAGCTGTCCGCGGAGGCGGCGCCCGCGGGGCTGCCGGCGCCGGGCGCGCTGGTGCGCGCGCCGCTGCGCGCCGGCATGCCCATCTACGCCATGCGCAACGCGTACGGCACGTGGCTGCGCGCGCGCATCGTCGACGTGCAGCCCAAGACTACCAACCAGTTCACAATGTGCCGCGTCAAGTTCGAGCATAAAGTGAAGAACCCGTGCAAGGTGCTGCCGGCGCGCTGCCTCGCGTACGACCAGCCCGCCTCCGTGCGCATGACCATCGGTACTAGAGTGATAGCGCTGTTTAAGGACCAGGACAACAAGAGGGAGTCGTACTACTCTGGAATAATTGCAGAAATACCCAACCCTGTGAACAGTTATAGATACCTGGTGTTCTTCGACGACGGCTACGCGCAGTACGTGACGCACGCGGCGACGCGCCTCGTGTGCGAGTGCGCGTCGCTCGTGTGGGACGAGGTGCACCCGTTCTCGCGCCAGTTCGTGCGCGACTACCTGCGCGCGTTCCCCGAGCGGCCCATGGTGCGCGCGCACGCCGGACAGAGCCTCAAGACGGAGTACAACGGCAAGTGGTGGGTGTCGAAGGTGGTGCGCGTGGACGCGTCGCTGGTGCAGGTGCACTTCGAGGAGGAGGGCCGCCACGAGTGGATCTACCGCGGCTCCACGCGCCTGGCGCCGCTGTTCCTGGAGCTGCAGGCCGCCGAGCGCCAGCGCGCGCGCCCGCTGCCGCGCGCGCAGCCCGGCCGCCGGTTCAATATGCCGTACGTGGAGTACACGCGCTCGGACGAGCCGGCGCCGCCGGCCGCCAGCACGCCGCAGCAGATAGAGCAAGAGATCCGGCGGCAGCGCGCGGTGGCCAAGAAGTCGACGGCGCTGCCCGCCGCGCCCGCGCCCGCGCCCCTCGACGCCGTCACCAGCCGTGTCGTCTTCTACACGCCCAAGAACGCAATCAGGCCGCACAAGATGGCCCCCCACACGTGCAGCCCGCGGTGCAAGCGGACGGACGTGCTCGCGCTCAAGGATCTGCGCACCTACAACCCGCTCACCAAACCGCTGCTCAGCGGCTGGGAGAGACAGATCGTGAAGTTCCGGTGGACGCGGTCGGTGATGTACCGCGCGCCGTGCGGGCGCCGCGTGCGCGACGTGCGCGAGCTGCACCGCTACCTGCGCGCCGTCGACAGCGACATGGGCGTCGACCTGTTCGACTTCGGCGTCAACACGCACTGCCTCGCCGAGTTCGTGCTCAACAAGTGCCTCATCAGCAAGAAGGTCGGTCCCGTTGCGATTACTGTGTGTGCATAA
- Protein Sequence
- MSADDQGDNLRLNKEEEPCTFDDTPVNPKDFAKIQMANSSLPKDDGDPNTDPGTIDDPSNRILEAFDADVEAVIEKKLNLADKEKADVDSELDFELKYEEDADEDQAEMDSAAMLPNDEPDKSESNIATELDNVGEPDKTESNVATELDNDDEPDITESNVATELDNIDEPDKVESNVVTKVDNVDALKINEQQVDDMTTNNSNNKELADAEKLVDTIFEIDTYTKTDLASEISPVESETTSLDEHLIYSDMDVPDIEDKDLIDEIDAQIMETEKKSNSEIFDDRGSKSPTTLPEDIQKTSNPGSSCKQDVDSTVMDIDDDLMKSITVMDKFNIKEKQDNLSIVMDVDDDLTESITLKDEIIVKEEQEILNDTISSSNDIDTSVFEINNEHGLTKPDVMIEIPTQELIESFDDSGEMSDEAEQYDEHVLSNNDKTNAKNIVTDVIQSAEVSTNEYDVIKEKTILDEVNVSDTKTLAIVSKDDKVDIAKKSSKQTGDKLVTESIAIENKTASEIMEKIEIVNKSENGNSDKAETTKLDQGKIENKDKENIADIVLETTNLEPKQIIGEIDNLEPNIVTETEHINSPDKIDSKNETEAKEATSAAGLEHKAVGCEENISPDTVESEVLLKAKDDSSYNDSKTKDINETPTTSTNEAQPSTSKYLLQELSDEDQEVTDSLGLLAESSRVMDDDDEQEQDQDQEEDDEDDDFDQDDESNQMTAEHSEDSNAQQSESDVPREAVGLEESPSTDKEAFEFQIGEVTSEKDDNTLDDYMAEESNEADVNEVENAVQALLGETRAEEEPAADVSPAAESAEEDTVKLSEDDNQDVGTEEEASKLRKLLLKDKDTAVSTTVEETSPSKMKKLEVAKPKHEFNIVDLEESSSEDDIQEVNKEPAEPAEKSQGEVSVNIPEEVEVMSASSGATTGLRRGAGEYVISVPKPPPGKPARLNTSEVTIKTASVATEPLAITESTSSTQDKAPLKFGLEIFSLDSDDDEKAADPPAKKLTAVEVERARESNKCINMFCSGDGAGPLLPADARCAAYYNSAHRGAVCLPCALAVAARTQNLIDGVKDFSPLLKLDMGQTREELVEISDSDSEDEPEVVKAADDVIGEAGAKFLEENLADMFNETWRKYNMDARLLEAQAELDQDVRKLEVECTEIDAMLSDCQAATDRLRRELYDSFAHERKELPAILIYDTPPSASRQSKRRLPAEVEPPPKRPAIPLGYAPLDSDATTTQSEPKPPAPVVTDVAVPNDDDNADISVVKLSAEAAPAGLPAPGALVRAPLRAGMPIYAMRNAYGTWLRARIVDVQPKTTNQFTMCRVKFEHKVKNPCKVLPARCLAYDQPASVRMTIGTRVIALFKDQDNKRESYYSGIIAEIPNPVNSYRYLVFFDDGYAQYVTHAATRLVCECASLVWDEVHPFSRQFVRDYLRAFPERPMVRAHAGQSLKTEYNGKWWVSKVVRVDASLVQVHFEEEGRHEWIYRGSTRLAPLFLELQAAERQRARPLPRAQPGRRFNMPYVEYTRSDEPAPPAASTPQQIEQEIRRQRAVAKKSTALPAAPAPAPLDAVTSRVVFYTPKNAIRPHKMAPHTCSPRCKRTDVLALKDLRTYNPLTKPLLSGWERQIVKFRWTRSVMYRAPCGRRVRDVRELHRYLRAVDSDMGVDLFDFGVNTHCLAEFVLNKCLISKKVGPVAITVCA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -