Talt020434.1
Basic Information
- Insect
- Tortricodes alternella
- Gene Symbol
- Rel
- Assembly
- GCA_947859335.1
- Location
- OX401979.1:10956650-11001756[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-32 5.9e-29 101.5 0.3 1 168 54 222 54 223 0.89 2 2 2.5 1.4e+04 -3.8 0.0 99 117 254 272 253 288 0.80
Sequence Information
- Coding Sequence
- ATGTCTTCAAGTGACCAGGATTCCATGAGTGAGTCGGCCAGTTCGACATGCCATGGTTCCCCCCGCAGCTCTCCAGCTCATCAGGTGCCGAATTTAGCTAACTCCTTTACGGAGCTGACTTGTGCCGACAACAATGGATATCGCCAAGACAAGCCCTATTTGGTTATGGTTGAGCAACCCCAAAACCATTTCCGCTTCCGGTACATAAGTGAACTGGTGGGCACCCATGGATGCCTTATGGGAAAAACTAGCAATAGCAACAAAAGCAAAACACACCCAATGGTAGAATTGCTGAACTACAAGAAGCGCGCGCTGATCCGATGCCGGCTTGCGCAGCACCTAAAGCCTGATGAGCACCCGCACCAGCTCTTGGAGGACGAGCAGGAGGGCCGTGACGTGAGCGCCATAGTGCCCGAACACGGCAGCTACAGAGTCGGGTTTGCTGGTATGGGAATTATACATACTGCCAAAAAGGACGTCCCCAGTTTATTGTTCAAGAAATATAAAGAGATTCAAAATAACATCGACAGCCAAGAGCTCCGTAATATCTGCGAGGCTGAAGCCAAAGGCATCAACCTGAACATTGTGCGGCTGAGGTTCAGCGCCCACGATATTGATACGGACCAGGAAATCTGCGAGCCGGTGTTTTCAGAACCCATACACAACATGAAAAGCGCGGCGACGAATGACTTAAAGATATGCCGTATAAGCCGTTTGTATGGACGTCCCAAAGGCGGGGACGACGTTTTTATCCTAGTAGAAAAAGTTAATAAAAAGAACATTGAGATTCGATTCGTGGAGAGAAATGAAGCCGGTGAGGTCTGCTGGTCTGCTAAAGCACATTTCTTGCAGAGCGACGTGCACCACCAGTATGCTATTGTATTCAGGACCCCAGCATACAAGGACCAGCAGATCAGTACCGACGTTAAAGTGGAAGTGATGCTGGTGCGACCACAAGACGGCCGCTGTAGCGACCCTAAGGAGTTCATCTACAGAGCCGACCCGCTGTGCAAACAGAACAAGAAGAGGAAGTTCAGCTCGCCGTATTCCTCGTTCAATAGCTCTCTAGGCACAGGATCCATTAAAAGTTTGAGTGATTTGCCAGATCCTATTCTTACTATGTTAAATCAACAAAAGAACACATTTGAAATCGAAAATGAAATGATCATAGACGAAGGCGTTATGCTGAACGCAATGCCTCAAGTAACGGAAGGATCCGCGAACTTCGATCTGAGCGACGCGCTCATGGATGAGGCCGGCGATCGGAACGCAGTGCAGCTGCATTACACCGTCAGCCCCATGCTGCCGCAGGCCGACCTGCAACCCATTACCTTGAACTCTGCAGAGTTCAACCAAATACTAAATTCGCCGCCGCCGGACGATTATGAAGAGTATATGCGGCAGTACATCTCATCAACAAGTATGGACTTCTTGCGGGTCTCGCTGGAAACCGACTCGGGTCGGGCCAAAGTCCCTAAAGTGAGTGCTCCTCGGCCCGCACCGACAGAAAACACCCGGAACGAAGCCGCCAATTCTAACAGCGAATACCCGGCGGTCTACACACCCGAACATGGATTGGAAGTAAAAAAATTGGTGAAGGAGATTTGCGATATAATACGGAGTAAGACTGGGTTCCAGAAACAAGTCGTCAAACAAAAACTGGAGAGACTGTTTGCCATGCGCTTGTCCAATGGAGATACGTTCCTCCACATGACTCTATTCAACAACCGCACAAGCTTCGAGTACATAGTGAAGCTGGTGCACACGGTGAAGATGCCACACCTGCTTAACCTGGTCAACGACCGCGGACAGACGATCCTGCACTGCGCCGTCCTCAACGATATTCCGCAGCTCATGCCCTTCCTCATTTCTAAAGGCTGCGATCCCATGATCGGCGATCAAGATGGCAACAACGCGGTGCATTACGCGGTCAACTACCAAGCGTGCATGCAACCCCTTCTAGAAGCTATCAAGAGCAACAAAGTGCACAGCGACCTCAACGCCGAGAATAAAGACAAACAAACGGCTCTCCATATAGCAGCGGTCCCAGGCCCGGATCCGTCGTCGATAGAGTCATCACAGAACTGTATTAAGTTGCTGCTGAAACATGGCGCCAGCTATAACGCACGCGATCAAGAAGGACGCACACCGCTGCATCTAGCCGCCTACGACGACTGCCTGCCCGTCGTGCAGACGCTATTGGAATTTATACCTTCGAGTGACATCGACGCCGTGGACGGTCGTGGCAACACCGCCCTGCAAATCGTGTGCGGCGGCGAAATCAAAACTAATACGGTTGCTATTGTGAAGTTGCTCATTGACAAAAAGGCGGACCCGATGGCGCACGAGCCGCACTCGGCGCCCGCGTGGCGCCTGGCGCGCGACTCGCCGGCGCTGCGCGCGCTGCTGGCGCCGCTCGCGCCCGCCGACATCAAGTCCGAGCCGGAAGACGAGTTCCAGTCCGCCGATGAGGAGGACGAGGAGTGCCTCAGCGACTTGTCGCTGTACCTGCACGACGTGGCGCGCGTGCTGGACGACAGCGGCGCGTGGCGCGCGCTGGCGGCGCGCCTGCGCTGCGACGGGCTCGCCAACTGGTACGCGCACACGCCGAGCCCCACGCGCACCCTGCTGCACCAGGTCAAGGAACGCCAGGATAGTAGTTTCACATCGAAGTCTCTCATGCTGATCCTGGAAGATATGGGCCAGGTGGAAGCAGCGCGCCTCATACGCAGCAGAATCGGCAATACCTTGTTCGAATAA
- Protein Sequence
- MSSSDQDSMSESASSTCHGSPRSSPAHQVPNLANSFTELTCADNNGYRQDKPYLVMVEQPQNHFRFRYISELVGTHGCLMGKTSNSNKSKTHPMVELLNYKKRALIRCRLAQHLKPDEHPHQLLEDEQEGRDVSAIVPEHGSYRVGFAGMGIIHTAKKDVPSLLFKKYKEIQNNIDSQELRNICEAEAKGINLNIVRLRFSAHDIDTDQEICEPVFSEPIHNMKSAATNDLKICRISRLYGRPKGGDDVFILVEKVNKKNIEIRFVERNEAGEVCWSAKAHFLQSDVHHQYAIVFRTPAYKDQQISTDVKVEVMLVRPQDGRCSDPKEFIYRADPLCKQNKKRKFSSPYSSFNSSLGTGSIKSLSDLPDPILTMLNQQKNTFEIENEMIIDEGVMLNAMPQVTEGSANFDLSDALMDEAGDRNAVQLHYTVSPMLPQADLQPITLNSAEFNQILNSPPPDDYEEYMRQYISSTSMDFLRVSLETDSGRAKVPKVSAPRPAPTENTRNEAANSNSEYPAVYTPEHGLEVKKLVKEICDIIRSKTGFQKQVVKQKLERLFAMRLSNGDTFLHMTLFNNRTSFEYIVKLVHTVKMPHLLNLVNDRGQTILHCAVLNDIPQLMPFLISKGCDPMIGDQDGNNAVHYAVNYQACMQPLLEAIKSNKVHSDLNAENKDKQTALHIAAVPGPDPSSIESSQNCIKLLLKHGASYNARDQEGRTPLHLAAYDDCLPVVQTLLEFIPSSDIDAVDGRGNTALQIVCGGEIKTNTVAIVKLLIDKKADPMAHEPHSAPAWRLARDSPALRALLAPLAPADIKSEPEDEFQSADEEDEECLSDLSLYLHDVARVLDDSGAWRALAARLRCDGLANWYAHTPSPTRTLLHQVKERQDSSFTSKSLMLILEDMGQVEAARLIRSRIGNTLFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -