Tyan016997.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Topomyia yanbarensis
Gene Symbol
Hr39
Assembly
GCA_030247195.1
Location
CM058069.1:31528714-31531558[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.22 8.5e+03 -2.1 0.4 134 168 25 56 14 106 0.68
2 4 2 7.7e+04 -6.3 9.5 70 121 227 280 136 369 0.57
3 4 4.1e-11 1.6e-06 29.9 0.0 1 135 438 566 438 580 0.78
4 4 3.7e-77 1.4e-72 247.4 0.1 198 408 575 780 564 780 0.96

Sequence Information

Coding Sequence
ATGACATCAACGGAGTCGCGTGGAAACGTATCGGTTACAACGATCAACTGTGGGAATGATCCCAGCCTCAGCCCGGCAAACGTGGGCACTATAATTCCGGCGGGATCCAGCTCCGGTAGTAGCAGTAGTAGTAACAGCAGTAGTAACACCCCGAATGCTAGCGTCAACAGTAGTACGATCTTCGGGAATGTTGGTATCAGAataaccgtgccaaaaatggaagaATCCGACGAGTCTGATACAGAGCTTTCGAACATTGAAAATACAGCCAAGGTAAACATGCGAGAGGATAGTCGCGCTAGCAAAGGACTGCCCCGGCCAATGTCCTGGGAGGGGGAACTATCGGAACCGGAAGCGATGATGATTGACAACGAAAATAGTTCCAGTGGGATCGGTCCGGAGATGGCAACAATCGAAAAGGCAGAGCCATTGCTAGTAACTAAGGAGGAACCATCGGGGCCCGGTATAACCGAACCGTTGGCACTGACGGCCAATCACAGCAGTAGTAGCTCTCCCCTGCCAAGTAGAATGATCAAACCGGAAGTGGGCATTCCATTGATCAACCAAAGCGTTGCATCGAGCTACGCTAATTCCATTCCatctagtagtagtagtagtagtattaATGCTAAGAAACTCCCGGACGTAATCAACTTAAAGTACGAGCATAGCTTGGCGGAGAATCTTCCAGCAGTCAATTCACCGCTTTTGGTCCGTTCCAAAACTACACTCCTCCCGGCCAATCCGAGTCCAGATTCCGCCATTCACTCGGTATACACGCACAGTTCACCTAGCCAGTCTCCGTTGACATCACGCCATGCTGCCTACACGCCTTCGCTAAGCCGTAACAATAGCGATGCCTCGTACAGCAGCTGTTATTCGTACAGTTCCGAGTTCAGTCCGACACATTCTCCGATCCAGGGACGGCACAATATGTTCGCCAGCGGGTCCTACAACGGGTCTCCGCTGCATCACTCAGTATTATACAAGCCGATGATCGACAACGAGCAAGCACTGAAGCTTGCCAGTCAGGAGGAGCCGGTCTTCGACAGCGAACATCTTCCGTCCCCGGGAATCTCCCGGCAGCAGCTGATCAATAGTCCATGTCCCATTTGTGGAGATAAGATCTCCGGGTTCCATTATGGGATTTTCTCGTGCGAATCGTGCAAGGGATTCTTCAAGCGTACTGTGCAAAACCGGAAGAACTATGTGTGCCTTAGGGGAGCGGCCTGTCCGGTGACGATTGCGACACGGAAAAAGTGTCCCGCCTGCCGGTTCGAAAAGTGCCTTCAAAAGGGAATGAAGCTGGAAGCTATACGCGAAGATCGCACACGAGGCGGTCGTTCCACGTACCAGTGCTCATACACCCTGCCCGGTACGATTCTGAGCCCTTCGCTGGCCGGCAACGATAATGGCAACAACTTTCCGTACTCGAAATTCCAATCTGGCGGTCAGTTTCCACCGGGCAGCATCGGAGGTTCGACCGGTCATCAGTTCAAGATCGAGTCTCAACAGGACGTCAAAAGTAACTCGAACAGCCCTGCTGGCATGCTGACCGGGAATAACGGTGGCGAACACGTACGACCGGGTGTTCCACAGCTACTGCAGgaAATCATGGACGTCGAACATCTGTGGCAGTACAACGCTATGGAATTGGCGAGGTTGAATCAACCGCCACCGCCGGTAACTCCGGCAGCCATTGCCGCTAGCCCTCTGCTCTCCAGTGCCGGTATCACCAGCGAGAGTAATCCGGATCTGATCGCGAATCTGTGCAACATTGCGGACCATCGACTGTACAAAATAGTCAAGTGGTGCAAGAGTTTGCCTCTGTTTAAGAACATTTCGATTGACGATCAGATCTGCCTGCTGATCAACTCGTGGTGTGAATTGTTGCTGTTTTCATGCTGCTTCCGGTCGATGCCGACTCCGGGGGAAATTAAGATCTCACTCGGAAAGTCGATCACGTTGGAGCAGGCCAGGCACAGCGGGTTGCAGACCTGTATCGAACGAATGCTCAATCTGACCGATCATCTGCGGCGACTTCGCGTTGATCGTTACGAATACGTCGCTATGAAGGTGATCGTGCTCATGTCGTCGGATACCTCGGAACTAAAAGAATCGGAGAAAGTAAGAGCCAGTCAAGAGAAGGCTCTACAGGCACTTCAAGCTTACACGTTAGCTCACTACCCGGAAACTCCGGCCAAGTTTGGAGAGCTACTGTTGCGAATTCCAGAACTTCAGCGAACTTGTCAGGTTGGCAAGGAGATGCTAACCATCAAGCCGAAGGAAGGCGAAGAACCGTCCTTTAATCTGCTGATGGAACTGCTCCGGGGAGAGCATTAG
Protein Sequence
MTSTESRGNVSVTTINCGNDPSLSPANVGTIIPAGSSSGSSSSSNSSSNTPNASVNSSTIFGNVGIRITVPKMEESDESDTELSNIENTAKVNMREDSRASKGLPRPMSWEGELSEPEAMMIDNENSSSGIGPEMATIEKAEPLLVTKEEPSGPGITEPLALTANHSSSSSPLPSRMIKPEVGIPLINQSVASSYANSIPSSSSSSSINAKKLPDVINLKYEHSLAENLPAVNSPLLVRSKTTLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAAYTPSLSRNNSDASYSSCYSYSSEFSPTHSPIQGRHNMFASGSYNGSPLHHSVLYKPMIDNEQALKLASQEEPVFDSEHLPSPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTIATRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPGTILSPSLAGNDNGNNFPYSKFQSGGQFPPGSIGGSTGHQFKIESQQDVKSNSNSPAGMLTGNNGGEHVRPGVPQLLQEIMDVEHLWQYNAMELARLNQPPPPVTPAAIAASPLLSSAGITSESNPDLIANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMPTPGEIKISLGKSITLEQARHSGLQTCIERMLNLTDHLRRLRVDRYEYVAMKVIVLMSSDTSELKESEKVRASQEKALQALQAYTLAHYPETPAKFGELLLRIPELQRTCQVGKEMLTIKPKEGEEPSFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00400673;
90% Identity
iTF_00948792;
80% Identity
iTF_01461940;