Basic Information

Gene Symbol
Hivep1
Assembly
GCA_959613345.1
Location
OY390708.1:5716040-5724664[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.00041 0.08 14.8 2.1 1 23 250 272 250 272 0.97
2 8 0.0051 1 11.3 4.8 1 21 278 298 278 302 0.89
3 8 0.0031 0.6 12.0 0.1 1 20 693 712 693 714 0.94
4 8 7.1e-06 0.0014 20.3 1.7 1 23 1444 1466 1444 1466 0.99
5 8 2.2e-05 0.0044 18.8 5.3 1 23 1472 1496 1472 1496 0.92
6 8 0.0015 0.3 13.0 2.2 2 23 1997 2018 1997 2018 0.97
7 8 0.0038 0.75 11.7 0.8 1 23 2024 2048 2024 2048 0.91
8 8 0.0038 0.74 11.7 2.5 1 23 2069 2093 2069 2093 0.92

Sequence Information

Coding Sequence
ATGGAGGAATCTAAGCTGATATCGAAAAAGCTGCACATAAAGGGTAACGAATATCACAAAGATTCCAAAATTAGCGCAGATCGACCATCCCACCGAAAAGAGAGTTCTGATCGAAGGGCGGATGACGATGAGCTTGTACATAGAACACCAAGTGATAGCACGATTTCAACCGATCTTATCAGtagtaataataacaatagtAAAACATTGAACAGTTCATCGAATGACCTTAAGTACctgcataaaaaattcaaacgaaTCGCCAGTGCCACATTAGACGAGGCCCAGCGTCAGCCTCCAGAAGTCGTTAAGAATCTCCAGACAACTCTGACAAACAGTCAGGAGAACTCGGTTAAATCCACCAAGGGTCAGGGTCCGCATGCAGCTTTCAATGGGCATGTGGACTATGTAAATATTAAGAGGGAATTATTAGCTTCCGAATTAAATGGCGAGGGTACCGAAGGGGTGGGTCTATCGAACAACTTTAAAGTGAAATTCTCACCCTGCAACGATGATAGTTCCCAcagtaatttttcaataaaagttgAGAGAACTTCATCGCCCGTGACGAGCCAGAATAACAATGTCTTGGGTCGGTTACCTTTAATCGTCAGCAATTTCAGTGGCTCGACAGTGTCTACTGTGTCTGTGACGAATGTTGGAAGTAGTCTGAGGGTACACCAGCCCCAAGTAGCATCACAGCGACCGCAACAGCGAGAAGTAGTTGACCAAAGTTTCTCTGGGCGGCATGTGTGTCCCTACTGTAACTTGAACTGCACGAAACCGTCGGTTCTACAGAAACATATCCGTGCTCATACCAATGAACGACCATATCCTTGTGATACTTGCGGTTTTGCATTTAAGACGAAAAGTAATTACTATAAGCACTGCAGGTCTAGATCTCATGCTCTTCGAACAAAAGGAGGGGAAGCACCACCAGACGATGATGCTTCTCTCGGATCGGATCAGGATCAGGATCCAGACTTAAGTAACAGTAGCTCCGATGTGATAAGCAGAACAGCTTCTCCAATGGATGAGAGGACCTCGTCGCCAGCTGTTCAGCAACAAGCTGCCCAATCAATtcagaaatattcaaatgagAAGCCATACAAGCCGAAATTCCATAATGCCGCTTTGTACGCCAAAGAGGAAAATTCGCAAATACAGaagcagcaacagcaacagcagcagcaacaacaacaacatcagCAACAGCACCAACAACACAATAACCTCAACCATCAAAGTCATTCGACAGATTATTACCCCGCAGCCTCACAACCACATCAAGGTCTCGACTCCCTTATGCAGCAACAGCCACAGGGACAGTCGTCCAGGAGTCGGGGGGATCAGGCGCCAGGACTCCCAACCAATACGCAGGGCTTTCAACAtgtgccgccgccgccgtctgGTTACGTCGAATCAACACCGCTATCAAGTCGGGAGTCAACAAGTGCGTCCTTCAGCGGAATCGTTGTGGCTGGCGGAGGACATCAGTTGAATCGTGAATTTCTACAAGAAcacatttcgaaaataatttcgcaaaatGAGGCTATCGTAGAAAACAAAGAGTTGCTGCTTCAAAAGAAATATCCAAAGTTGTCGGGAAAGTCGAAAAATTCGACAATAATCTTATCAAACGAAAGCTCCAATACAAAATTAGCATTTGCTCTGGCTAAtaagcaacagcaacaacatcTTCAGCAGCAAGGTCGCGATGAGGCGACCGTGGGCAAGTCTACTGCCATTAACAACTCACTGGCAAATAATACGGCGGTCTTACTGGCTTCTAGAGTAAATCAACATAATATGAGCCAAGCTAGTCAATCCCAGGAAGCTCCGGTGACATTCCAACCGTTAAATTTATCGAAAATTGCTGAGCAAATTGATATGAACAGGAAGCGACTTCCGATGGAAAGTCCTTCTTCAGTGGCCTCTGAAGGAAATTTGCCAGCGACATCGGGGATCAAAAGCGGACCAAGCAGACTTGTGAATCAAGAGCGATCTATCATAAAGCACCTGCTGTTGAATGCCAGGGGCTTGGGAGTGCCCAATGGCGAAGGAGAGGATGCGGTGTATATTTGTCCGCTTTGCAAAATGGAGTTTAGGTCGGCTGAAGATTTAAAGTTGCACACTAGCAACTACTGCCAAGGCGGACCATCGAGTGCACCTATTAGTCCTGTGGCATCGCCATCCTACAAATACTTCCGCTCGAATTCAATCAACGTCAGCCTACCAGAGTTTAACAATCCTAATTCGCTGGCTAAACTGGCCCGGTCATCTTTATTACATCTATCGAAGAATCCTCTGTCCCTTGCCAAGCTGGCGTGGTCTCAATTGAAAACGAAGCCCAGTAATCTTGTATTGAGTAAGCTTAGTGTTAATACAAACACCACTGTAGCCAGCTCGAGCAATGCAAGTGATAGTACCTATTCTACGCATTCGAAAAATATAGACGCACCTTTGCCATCACCGGGTCCATTGCTAGGGAAAACGCCCCTTGTTGAGTCGTACAACAATTCGGAGCGAAAATCTGAAGACGTTGTAATAACCAAGGTGCACGAGGAAAATAGaaactttgtaaaattttcatcgAAGCGGCTGAGGCTGAATCATTATCCACAACAAGCGTTTCAGGGAATGTTGAGCGATGCCAATGCAGCGTCGAGCAGTAACAACATTCCGAGCTATAATAATGCGAATTTACCTTTTGAGGTAACGCCGATGAAGTATGCTATGTGTGGCGGAGAGGTCCAAATGTTGGATAAAAAGGAGGATAGAATGAAGAGGTACCTCTCCTCAGGAGGGTGCGTAATTCCAATCTCAGAGTGTCCTGATATAGAAGTCAGTCCGAAAATGATCCGAACACCTCTCTTATCGGGCGGTAGTTTTACAGAAGTCTCACCGAAATCGTCAATTAAAGATACTCCTCCAACTCCATCCAGTACTCCAAAAATGATGATACCTATAGCTCCGCTAACGCCCAGTCTTCCTGCTCCAAATTTACTCACCGCCGGCCTGCCATTGGCgacacattttcaatttcctccGATTAATTCAATTACTGCATTTAATCCATTGACCCTTCCTCCGGTGTCTATAGTTCCATCGACGGTTATGCACGGTGACAAACTTATACCATTTGTACCTGGAATTCCCGGTCCAAATTCTCTGGCGCCACCAACTTTAGTCCATCCTCCGCAGATTGCCAGCGATATTTCACTGAGTCGCAATCTTAGTCCGAGTAGGAAAAAGGAagcgaatattttaaattcaattaatgtCCAACCGGACGGAGTGCTCCATGTGACCCACTCGCCCAGCCCAAGGCTGGTCAAACCGATTATTCGAATTGAAGGCGAACTTCCGTCTCCTGTAGGCGATTCAAGTCGATTTCTTCAAGCAAGCCCAAGGCATTCACAACCTGCAACTGGAGtagaatcaataaaaaaatcttttaatttcactcGAATGGCAGACAATATCAGTCCAAGGAAAGGCATAATTGAGAAGACAACAAAATCTCCGGAGAAGGAACGAGAAATACGtcactttaattttgaaaatataccaAAAGTCGATATTATCGCAATTTCGCAACCATCGCAGCTTCAGCCAATGGCTCCATTGCATGTCGATGTTTCAAGCATCATAACGAGCCAAAATGTTCAGAAACAGCCGTCGGAGTGCGAACTATCTGAAGTGAAGAATAAAGCCAAGTCGAAGTTCCTGAGGCCAACGAGTCTTCCTCTGAAGCCGGGCACATTCACTCCGAAACGGCATCACGGCATAACGCCTACAGCCAACACACTGCCCCTAATTTCTCCAGAAACGCCACGCCCCTCGAAAGCCTGCATTCAGCTCTATCTCAACGGGCACGCCTACACTTACCTGGGTCTCAAGTGCAGCACAAAGATGTTCTACTGCACCGTGAACTGTCCGCAGCCGTCTTATGTTGCCAATCTCCACAAACTCTCGATGTACAGCGTTTGGCAGGTTTGTGCCGAGAACAATCCTCATCCGCTTGGACTCAAGCCGAAAGAAGTTATGTCCCTCTACGACACGCGTCAGCGAAGTTCGGCTTACACGACGACCGCGATCAGTGCACCTTGCACCGTGGTCCACTCCCAGCCTCCGGTGATGACGCCCTTCGAAAGCACCGCGGCCACTTCCGGTCAGTTTTATCATCATCAGGTGAAGTCCATTCAGCCTCCAGTTGATCCTGGCTTGAAATCAGACGGGAGTTCCAAGAGTAGTGGGAACGTCTTAGTCGGAGGGTACGAGAGCCACGAGGACTACACCTATATTCGGGGGAGGGGGCGGGGGCGGTACGTCTGCTTGGAATGCGGCATCCGGTGCAAGAAGCCGTCTATGCTTAAGAAGCACATCAGGACTCATACCGATGTGCGGCCATACACTTGCCAACATTGTTCCTTTAGCTTTAAGACGAAAGGCAACTTAACAAAACACATGCAATCAAAAACAcactataaaaaatgtttggagCTTGGTATTAATCCTGGTCCAATGCCGGCCGAAGGAGAATTTATGGACACTGATGGTGACACAGATCAGCAGTCAGTTATTTCTGCCGGCGGTCGCACATCGTCTATTCCTGGTGAATCTGATTCCGATGATTACAGCGATATTGGTGACAATGAAACCGAGAGCAGTGatACAGATGAATCAAAATCGAGATTACCCGAGCATGAAGCGGCCCGGTGCCTCCTATCGCTTTCTATGACTCCTCCAGCAAACAGCGTTTCGCACCACATGCACCAGAGTCGACCGCAGTACGGATTCAAGCAAATGGAGCCTATGCAAGTGAGTAGCGTCAATGCAGGCCGATCCTCGGAGGAGGTGCAGCACGCCGCTGGGCAGCCTTACTCCTCACGGCGCGTGATTTCATTCACCTCACCAAAGCCGCCGTTCGACTACCAAAAGCAGGAGCAGTACTACTCCAATCCGAGCATAATCCCGAAGGGCAGGGAAGAGAAGTTTGATGAGTCCAGCATGAAGCCGATCGACTTGACCAAGCCTAGGCAAGTTGATAAGccgaaaatatttgaagttatTGGCGATTTAACCAATGAGTCGGGATTGTTGAAGTCGTTAGTGTCGATTACGGATAGAATTAGGAGCTCAACAGAGCCGGCGATTCAGGTCCAAAAGATGGATGAGAGTGTGCTGCTGCAGGCGTATTTGACTGAGCAAGCCTTGCAATATACAAAAATCAAGCAGAGCCAAATGAATAAACATTTCCCAGAGGTTATGTCGTGTTCGAGCACATCGACAGTGACCTTGACCGTTTCACCTTCTAGAGGGTCTGTTTATGAGAGGGTTCCAGAAAATGTTCTTAGCGGAACTCCATATTCTTCTAGAACCCCAGAGCTATCATCGGTAGTTTTTTCCACTATAACTACGCCATGCACTTCAATTATTAGGCCACCTTCTGTAGTAGACGATCAGATGGATAGGCCTGTAGAGAAAGATTGCGAGAAAGGGAACAGCACAGAAGTGATAATTCCCGGTCCACTAGATCACCGACTCGAGTCAAGTCGGAGCCCGTCTTTGATTCAGAGTGATTCTAAAATAGAAAGCGAGCACAGATCTCCAGGACATTTTAATTCTTCTGTGATTTGCTCTGGTGTGTCGGTTCCAGAGCCTAGCAAGGATGTGACTCAGAGTCCTAGACCGAGATCACTTCCACCGGGAACCGGTGGGGCGAAAAGTGTTGCGTCTGAGTACCTCAAAATGACCTCAGCAGAACTACTGAAATCTAGAAGTAGTCGAACTGAAGAAAGTGAGGAAAGCAGCTCGGATCAAGAGATTAATGTGACCGAGACTGGATCAGCAATTAAACCGCCTGCGGATTTTGCAGGGGTCTTAGCTCGCACGGTTATCGTGGGAGAAGATGGATTTAAGAATAGTTCAAACGAAGTGCAGCCGATGTTTCCGCGGGTCCCTCTCTCAGACGATGGCCGGCCGGTTTGTACGATATGTTCAAAAACGTTTCAGAAGCAGCATCAAATGGTCCTTCATATGAACATCCACTACATGGAGCGGAAGTTCAAGTGTGAACCGTGTGCGGTCAGTTTCCGCACACAAGGGCACTTGCAGAAGCATGAGCGATCAGAAGCACACAAGAACAAGGTGATGATGACCTCTACTTTTGGGGTCCCTACCACCTCCAATCCTCGTCCTTTCGAGTGCTCGGATTGTAAGGTTGCTTTTCGCATCCATGGCCACTTAGCGAAGCATCTCCGTTCAAAGACGCACGTCCAGAAGCTGGAGTGTCTCCAGAAGTTGCCGTTTGGGACGTATGCGGAAATAGAACGCGCTGGAATCAGCCTCACCGAAATCGACACCACTGACTGTGATAACTCACTTGCTAGTCTCAAAGCTCTTGCTCAGAAGCTGATTGAAAAGGACCCCACAAAGTTGAACTCGTACAGCACCTCACCGTGCATGGAGACGAACTCAGCCACAGGGTCGCACGAGAGCGGCAGCGAAGACAGTCCTGATCGGCAGACAGATTTGAACGAAATCCGGGACCTTCCGGAAGTCCCCCTGATGGCTGTCGCGGTGCCATCCGCAGAAGGATCAGGACTCAAGCGGAAATTCGACTCCGTAAACAATTGCAGCAACGATTCGCTCGCAGTTGGACCACAAGAAACGCTGGAGAAACGGCTACGAACTACTAGTGAAACCTAG
Protein Sequence
MEESKLISKKLHIKGNEYHKDSKISADRPSHRKESSDRRADDDELVHRTPSDSTISTDLISSNNNNSKTLNSSSNDLKYLHKKFKRIASATLDEAQRQPPEVVKNLQTTLTNSQENSVKSTKGQGPHAAFNGHVDYVNIKRELLASELNGEGTEGVGLSNNFKVKFSPCNDDSSHSNFSIKVERTSSPVTSQNNNVLGRLPLIVSNFSGSTVSTVSVTNVGSSLRVHQPQVASQRPQQREVVDQSFSGRHVCPYCNLNCTKPSVLQKHIRAHTNERPYPCDTCGFAFKTKSNYYKHCRSRSHALRTKGGEAPPDDDASLGSDQDQDPDLSNSSSDVISRTASPMDERTSSPAVQQQAAQSIQKYSNEKPYKPKFHNAALYAKEENSQIQKQQQQQQQQQQQHQQQHQQHNNLNHQSHSTDYYPAASQPHQGLDSLMQQQPQGQSSRSRGDQAPGLPTNTQGFQHVPPPPSGYVESTPLSSRESTSASFSGIVVAGGGHQLNREFLQEHISKIISQNEAIVENKELLLQKKYPKLSGKSKNSTIILSNESSNTKLAFALANKQQQQHLQQQGRDEATVGKSTAINNSLANNTAVLLASRVNQHNMSQASQSQEAPVTFQPLNLSKIAEQIDMNRKRLPMESPSSVASEGNLPATSGIKSGPSRLVNQERSIIKHLLLNARGLGVPNGEGEDAVYICPLCKMEFRSAEDLKLHTSNYCQGGPSSAPISPVASPSYKYFRSNSINVSLPEFNNPNSLAKLARSSLLHLSKNPLSLAKLAWSQLKTKPSNLVLSKLSVNTNTTVASSSNASDSTYSTHSKNIDAPLPSPGPLLGKTPLVESYNNSERKSEDVVITKVHEENRNFVKFSSKRLRLNHYPQQAFQGMLSDANAASSSNNIPSYNNANLPFEVTPMKYAMCGGEVQMLDKKEDRMKRYLSSGGCVIPISECPDIEVSPKMIRTPLLSGGSFTEVSPKSSIKDTPPTPSSTPKMMIPIAPLTPSLPAPNLLTAGLPLATHFQFPPINSITAFNPLTLPPVSIVPSTVMHGDKLIPFVPGIPGPNSLAPPTLVHPPQIASDISLSRNLSPSRKKEANILNSINVQPDGVLHVTHSPSPRLVKPIIRIEGELPSPVGDSSRFLQASPRHSQPATGVESIKKSFNFTRMADNISPRKGIIEKTTKSPEKEREIRHFNFENIPKVDIIAISQPSQLQPMAPLHVDVSSIITSQNVQKQPSECELSEVKNKAKSKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKACIQLYLNGHAYTYLGLKCSTKMFYCTVNCPQPSYVANLHKLSMYSVWQVCAENNPHPLGLKPKEVMSLYDTRQRSSAYTTTAISAPCTVVHSQPPVMTPFESTAATSGQFYHHQVKSIQPPVDPGLKSDGSSKSSGNVLVGGYESHEDYTYIRGRGRGRYVCLECGIRCKKPSMLKKHIRTHTDVRPYTCQHCSFSFKTKGNLTKHMQSKTHYKKCLELGINPGPMPAEGEFMDTDGDTDQQSVISAGGRTSSIPGESDSDDYSDIGDNETESSDTDESKSRLPEHEAARCLLSLSMTPPANSVSHHMHQSRPQYGFKQMEPMQVSSVNAGRSSEEVQHAAGQPYSSRRVISFTSPKPPFDYQKQEQYYSNPSIIPKGREEKFDESSMKPIDLTKPRQVDKPKIFEVIGDLTNESGLLKSLVSITDRIRSSTEPAIQVQKMDESVLLQAYLTEQALQYTKIKQSQMNKHFPEVMSCSSTSTVTLTVSPSRGSVYERVPENVLSGTPYSSRTPELSSVVFSTITTPCTSIIRPPSVVDDQMDRPVEKDCEKGNSTEVIIPGPLDHRLESSRSPSLIQSDSKIESEHRSPGHFNSSVICSGVSVPEPSKDVTQSPRPRSLPPGTGGAKSVASEYLKMTSAELLKSRSSRTEESEESSSDQEINVTETGSAIKPPADFAGVLARTVIVGEDGFKNSSNEVQPMFPRVPLSDDGRPVCTICSKTFQKQHQMVLHMNIHYMERKFKCEPCAVSFRTQGHLQKHERSEAHKNKVMMTSTFGVPTTSNPRPFECSDCKVAFRIHGHLAKHLRSKTHVQKLECLQKLPFGTYAEIERAGISLTEIDTTDCDNSLASLKALAQKLIEKDPTKLNSYSTSPCMETNSATGSHESGSEDSPDRQTDLNEIRDLPEVPLMAVAVPSAEGSGLKRKFDSVNNCSNDSLAVGPQETLEKRLRTTSET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00936817;
90% Identity
iTF_00937572;
80% Identity
-