Basic Information

Insect: Tolmerus cingulatus
Gene Symbol: -
Assembly: GCA_959613345.1
Location: OY390710.1:2640836-2644531[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.4e-05 0.0066 18.2 0.7 1 23 156 178 156 178 0.97

2 15 0.00023 0.045 15.6 0.4 1 23 184 206 184 206 0.97

3 15 0.00054 0.11 14.4 0.1 1 23 291 313 291 313 0.98

4 15 0.0058 1.1 11.2 0.6 1 23 319 341 319 342 0.96

5 15 9.3e-06 0.0018 20.0 2.9 1 23 369 391 369 391 0.97

6 15 0.014 2.8 9.9 0.2 1 23 403 425 403 425 0.94

7 15 0.38 74 5.4 0.3 1 23 431 454 431 454 0.85

8 15 0.34 66 5.6 0.8 3 19 463 479 462 480 0.94

9 15 8.1e-05 0.016 17.0 5.9 1 23 489 511 489 511 0.96

10 15 0.014 2.8 9.9 1.6 2 23 517 538 516 538 0.97

11 15 2.1e-06 0.00042 22.0 1.0 1 23 546 568 546 568 0.98

12 15 0.0035 0.69 11.8 0.2 3 23 576 596 574 596 0.97

13 15 4.2e-05 0.0083 17.9 0.5 1 23 602 624 602 625 0.95

14 15 0.26 51 6.0 0.2 1 23 635 657 635 657 0.96

15 15 0.00066 0.13 14.1 0.1 1 20 1024 1043 1024 1046 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.4e-05	0.0066	18.2	0.7	1	23	156	178	156	178	0.97
2	15	0.00023	0.045	15.6	0.4	1	23	184	206	184	206	0.97
3	15	0.00054	0.11	14.4	0.1	1	23	291	313	291	313	0.98
4	15	0.0058	1.1	11.2	0.6	1	23	319	341	319	342	0.96
5	15	9.3e-06	0.0018	20.0	2.9	1	23	369	391	369	391	0.97
6	15	0.014	2.8	9.9	0.2	1	23	403	425	403	425	0.94
7	15	0.38	74	5.4	0.3	1	23	431	454	431	454	0.85
8	15	0.34	66	5.6	0.8	3	19	463	479	462	480	0.94
9	15	8.1e-05	0.016	17.0	5.9	1	23	489	511	489	511	0.96
10	15	0.014	2.8	9.9	1.6	2	23	517	538	516	538	0.97
11	15	2.1e-06	0.00042	22.0	1.0	1	23	546	568	546	568	0.98
12	15	0.0035	0.69	11.8	0.2	3	23	576	596	574	596	0.97
13	15	4.2e-05	0.0083	17.9	0.5	1	23	602	624	602	625	0.95
14	15	0.26	51	6.0	0.2	1	23	635	657	635	657	0.96
15	15	0.00066	0.13	14.1	0.1	1	20	1024	1043	1024	1046	0.94

Sequence Information

Coding Sequence: ATGGACAATACCGGCTATCAAATACAATGGGTCCAAGATATCGAAAACGATAGCCAAATAGTCAGCGAGGAAGTAATAACAATTGACTCACAGAGTGAGGAGGCGGAGAGTAATGCGCCGCAATATTTTGTACAAGAGATATCCTCAATCCCAACCAGTTTAGACCAAATAGCTGCGGAAAACTTAATATATATGGCCCAAGATGGGCAGGTGACGACAATGGAAGGCTTAATCGATCAAGGAGCCGACAACAACGATACTCAAAACTATAACGAACACCAATATTTCGAGTGTCAAGTAACTGAGGAGGTAATTACCGATGATTGGGTTCAGCAGCAAGGTGAAGAAAGaGTGGAAATTCCAGTGGACCAACTCTGTGGCTCGGGTGGTGGAGATCCTCAGTTGGTTGAAGATCTTGATGTTCCATTACCAACTGATCAGGATGAGTACACAGCTCTAAGACCCTATCCCTGTGATTTTTGTAGTAGACGATTTCGCAAAAAGGCTAGTCTTATGAATCACATGATCGCTCATCAGAACGATCGTCCGCATGTGTGCAATTTGTGTGGGGCGCGATATGTTAGACGCAATGATTTacttattcatttaaaaattcacgcTCAGGTTCCTGACGATAAAATGGACGATATCGATGATAATTATTTCAGTGACCACATGGAGGCCAGGCCGCCTCGACAAAATGAATATTACGATCACGAGGATTACGAGGAACGGCCGAAACCAAAAGCGAAGCCGCGATCGAAGAAAATTAAGATGGTTAAGGAGGAAATTCATTTCTCTGATCACGAACAAATTATAGAGAAAACTATTAAAGAGGAAAGGTTTTCAATCACAGATCCTAAAAAGCCCTTTGTGTGCCAGCAATGTGGGGTTGGATTTGCCAGAGAGAAGGCATTGTTATCGCATTCAAGAATCCACGGTAGTGATTCACCTTACGAATGCGGTAACTGCAGTGAAATGTTCTGGGATATGAATGCACTAAATGAACATCAAAGAACACACCATTTCGAGGCTAGTAACTCTGAGTATGAGCCTGAAAATGACGAAGAGTCTGAGTCGGAGAACGACTCCAAGTACGGCGATTTTTATTGTAACATTTGTGGTATGTCTTTTCATAGGCAGGATTTGCTTAAAAGACACTCAAAGATTCACGTAAAAAAAGAATTAGTTGAAGGAGATTCAAGACATTGTTGTAATGTTTGCGGAGAAAACTTTGCTGAGGCGTTGGATTTGCTAGCTCATGCTGAGATACACGCTAGGTTTCAACCATTTAAGTGCATGCTTTGTGGTGAAACTTTTTTAGAAGAGGCAACCATTAAAAAACACTTGACTAACGTACACTCCGCTGAAATGACTCCAAATTCCTGTAGGCTATGCGGCAAGCAGTGCAAAGATGGCAGAGCCTTGATGAAACACGCTTGGGATCATTCCAGGGAGAAGAATCACTCGTGCTCTAAATGCGGAAAAACCTTCCACAATAAGGCTAGGCTTAAGCGCCACATGGTTTCCCACCGCAATAAATCTGTAACTTGTGATGTTTGTCACGAAGAATTCCCTGATGGACGCTCCTTGATGAACCACAGGCATTCACACACAAACTCTTCAGGGCGGCTCTTTCCTTGTCATGAGTGTGGAAAAACGTTTGGTTCTAGAAGCTCACAACAAATCCACATTCGAATTCATACTGGAGAAAGACCGTACGGCTGTAGGTTTTGTTGGAAAGCCTTTGCTGATGGTGGGACGCTGAGGAAGCATGAACGGATTCACACAGgggAAAAGCCCTATGCTTGCTCCGTTTGTCCTCGAGCATTTAATCAAAGAGTGGTTCTAAGGGAACACATAAGATCGCACCATTCAGCTATAGATAGTAAAAGGGGGACTTATTATTGTACCGTCTGCTCTGATGTTCTTCCATCATCTGTAGAACTTATCCAGCATTTAATTCATCATAGCGATATGAATACAGCCATGCAAAGACAGCCAATTACTGGTCCTCGGAAATATAAACGACGCCGAAAGCTAAAACCGCATGAAATTGAACGTCttcgaaatgaaaaatcaaataacaGTGACATCGAGTATTCAGATCTCGACATGGGTACTGTTGATGATCTTCTCGCTAATGAGACAACCACACTATCAGGACGTAGTAGAAAGTACTCAGGGAATTCAGATAAAGGGAGCAACTGCTGGCAGAATAAGCTTATGTCGACAACAACAGAGGATCCCTACAATTCAGTTTTTCAAAACTTGGAgaatactttaaataatttagactCTTTAGTTGTTGGAAATACGAATACAACATCAGCGCCAATGGTATCCACTCCGAAGGCATCAAAAGCTTCAACAAAGAGGAGGTCTACTGCTAAAGCAGAAACAGTAGATAAACCTTCTAGACCTAAAATGATTCACACTCAGAAGACCAGAGTTGCTACTGAGGATGGAAAGAGAAAGACGAGGACGATGATTACGAAAAGCGAACCAGTTGAAATTGACGATCAGCTATTTCAGCAATTTGATCGATCTAAAACTGGTCGAAAAAGAGATAATAGCACTACAAGTGTTAATAGCGATTTCGACCTGATACTACAAGATACGGTGCAAAATCAGACGATTCCAATGATTAAGAGGGAACAACAATCTACATCTCGTAGTGAATTTTTTGACGCGCAACTTCTTCTGGAAGCAGCTTCTATGCGCAAAGACATGGATAAATATAATCCGGATGTggtaaatgatcttgaagataTTTTAAGATCTCCTATAAAGAAATCGTCACCTCCTGCTGCACCAGCACCAAGCGTTGTATCAAGTTTTCAACCGGAAGTCGCAACAGAACCACCTCAAGAAGATTTACGGCGTTCTACACGTATAAAACGTTCCTTGCCcaacagaaaatatttaggGTTTGAAACCCCGTCTAAGTCCAGAAAGAGTGCAACACCgccgaaaataaaaattgaaaagatagACGTCATGGagataaaacaagaaaagtcTGAAAATCCTCCAGAGATCGAAGCTAAACCAGCGAAAAGCGAATATTTCCAGTGCGAGATGTGTTCCTTAACGTTCTCTGACCGTGCGCAGTTGCTTGTGCATGTGCCGATTCATATATAA
Protein Sequence: MDNTGYQIQWVQDIENDSQIVSEEVITIDSQSEEAESNAPQYFVQEISSIPTSLDQIAAENLIYMAQDGQVTTMEGLIDQGADNNDTQNYNEHQYFECQVTEEVITDDWVQQQGEERVEIPVDQLCGSGGGDPQLVEDLDVPLPTDQDEYTALRPYPCDFCSRRFRKKASLMNHMIAHQNDRPHVCNLCGARYVRRNDLLIHLKIHAQVPDDKMDDIDDNYFSDHMEARPPRQNEYYDHEDYEERPKPKAKPRSKKIKMVKEEIHFSDHEQIIEKTIKEERFSITDPKKPFVCQQCGVGFAREKALLSHSRIHGSDSPYECGNCSEMFWDMNALNEHQRTHHFEASNSEYEPENDEESESENDSKYGDFYCNICGMSFHRQDLLKRHSKIHVKKELVEGDSRHCCNVCGENFAEALDLLAHAEIHARFQPFKCMLCGETFLEEATIKKHLTNVHSAEMTPNSCRLCGKQCKDGRALMKHAWDHSREKNHSCSKCGKTFHNKARLKRHMVSHRNKSVTCDVCHEEFPDGRSLMNHRHSHTNSSGRLFPCHECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSAIDSKRGTYYCTVCSDVLPSSVELIQHLIHHSDMNTAMQRQPITGPRKYKRRRKLKPHEIERLRNEKSNNSDIEYSDLDMGTVDDLLANETTTLSGRSRKYSGNSDKGSNCWQNKLMSTTTEDPYNSVFQNLENTLNNLDSLVVGNTNTTSAPMVSTPKASKASTKRRSTAKAETVDKPSRPKMIHTQKTRVATEDGKRKTRTMITKSEPVEIDDQLFQQFDRSKTGRKRDNSTTSVNSDFDLILQDTVQNQTIPMIKREQQSTSRSEFFDAQLLLEAASMRKDMDKYNPDVVNDLEDILRSPIKKSSPPAAPAPSVVSSFQPEVATEPPQEDLRRSTRIKRSLPNRKYLGFETPSKSRKSATPPKIKIEKIDVMEIKQEKSENPPEIEAKPAKSEYFQCEMCSLTFSDRAQLLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00628579; iTF_01184004; iTF_00937494; iTF_00936749; iTF_00717980; iTF_01049859; iTF_01256562;
90% Identity: iTF_00628579;
80% Identity: -