Basic Information

Insect: Philonicus albiceps
Gene Symbol: -
Assembly: GCA_963969385.1
Location: OZ017774.1:42619610-42623407[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.2e-05 0.0046 18.2 0.7 1 23 156 178 156 178 0.97

2 15 0.00022 0.032 15.5 0.4 1 23 184 206 184 206 0.97

3 15 0.00051 0.074 14.4 0.1 1 23 295 317 295 317 0.98

4 15 0.011 1.5 10.2 0.7 1 23 323 345 323 346 0.96

5 15 1.1e-05 0.0016 19.6 3.8 1 23 373 395 373 395 0.98

6 15 0.014 2 9.9 0.2 1 23 407 429 407 429 0.94

7 15 0.36 52 5.4 0.3 1 23 435 458 435 458 0.85

8 15 0.31 44 5.6 0.6 3 19 467 483 466 484 0.94

9 15 7.6e-05 0.011 17.0 5.9 1 23 493 515 493 515 0.96

10 15 0.014 1.9 9.9 1.6 2 23 521 542 520 542 0.97

11 15 2e-06 0.00029 21.9 1.0 1 23 550 572 550 572 0.98

12 15 0.0034 0.48 11.8 0.2 3 23 580 600 578 600 0.97

13 15 4e-05 0.0058 17.8 0.5 1 23 606 628 606 629 0.95

14 15 0.25 36 5.9 0.2 1 23 639 661 639 661 0.96

15 15 0.00062 0.09 14.1 0.1 1 20 1049 1068 1049 1071 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.2e-05	0.0046	18.2	0.7	1	23	156	178	156	178	0.97
2	15	0.00022	0.032	15.5	0.4	1	23	184	206	184	206	0.97
3	15	0.00051	0.074	14.4	0.1	1	23	295	317	295	317	0.98
4	15	0.011	1.5	10.2	0.7	1	23	323	345	323	346	0.96
5	15	1.1e-05	0.0016	19.6	3.8	1	23	373	395	373	395	0.98
6	15	0.014	2	9.9	0.2	1	23	407	429	407	429	0.94
7	15	0.36	52	5.4	0.3	1	23	435	458	435	458	0.85
8	15	0.31	44	5.6	0.6	3	19	467	483	466	484	0.94
9	15	7.6e-05	0.011	17.0	5.9	1	23	493	515	493	515	0.96
10	15	0.014	1.9	9.9	1.6	2	23	521	542	520	542	0.97
11	15	2e-06	0.00029	21.9	1.0	1	23	550	572	550	572	0.98
12	15	0.0034	0.48	11.8	0.2	3	23	580	600	578	600	0.97
13	15	4e-05	0.0058	17.8	0.5	1	23	606	628	606	629	0.95
14	15	0.25	36	5.9	0.2	1	23	639	661	639	661	0.96
15	15	0.00062	0.09	14.1	0.1	1	20	1049	1068	1049	1071	0.94

Sequence Information

Coding Sequence: ATGGACAATACCGGCTACCAAATACAATGGGTCCAAGATATCGAAAATGATAGTCAAATAGTCAGTGAAGAAGTAATAACAATTGACTCGCAAAGTGAGGAGGCGGAAAGTAATGCGCCGCAATATTTTGTACAAGAGATATCCTCAATTCCGACCAGTCTAGATCAAATAGCTGCAGAAAACTTAATCTATATGGCCCAAGATGGGCAGGTGACGACAATGGATGGTTTAATCGATCAAGGAACGGACAATAATGATACTCAAAATTATAGCGAACACCAATATTTTGAGTGTCAGGTAACTGAGGAGGTAATTACCGATGATTGGGTGCAGCAGCAAGGTGAAGAAAGAGTGGAAATCCCAGTGGATCAGCTCTGTGGTTCGGGTGGCGGAGACCCTCAGTTGGTTGAAGATCTTGATGTTCCATTACCAACTGATCAGGATGAGTACACAGCTCTAAGACCATATCCCTGTGATTTTTGTAGTAGACGATTTCGCAAGAAGGCTAGTCTTATGAATCACATGATCGCTCATCAAAACGATCGCCCGCATGTGTGCAATTTGTGTGGAGCGCGATATGTTAGACGCAATGATTTACtgatacatttaaaaattcacgcTCAGGTACCTGACGATAAAATGGACGATATCGATGATAATTATTTTAGTGACCACATAGAGGCTAGGCCGCCTCGCCAAAATGAATATTATGATCATGAGGATTACGAGGAAAGGCCTAAACCAAAAACAAAGCCACGATCAAAGAGAATGAAAGTGGTTAAGGAGGAAGTTCATTTTTCTGATCACGAACAAATTGTAGAAGAAACTATTAAAGAGGGTGAACATATCGAAAGATTTCCAATCACTGATCCTAGAAAGCCCTTTGTGTGCCAACAATGCGGAGTTGGTTTTGCCAGAGAGAAGGCGTTGTTATCGCATTCAAGAATCCACGGCAGTGATTCACCTTATGAATGTGTTAACTGCAGTGAAATGTTCTGGGATATGAATGCGCTAAACGAGCATCAAAGAACACATCATTTCGAGGCTAGTAACTCTGAGTATGAACCTGAAAATGATGAAGAATCTGAGTCGGAGAACGACTCTAAGTACGGCGATTTTTATTGTAACGTTTGTGGCATGTCTTTTCATAGGCAGGATTTGCTTAAGAGACATTCAAAGACTCACGTTAAAAGAGAATTAGTTGAAGGTGACTCAAGACACTGTTGCAATGTCTGCGGAGAAAATTTTGCTGAGGCGTTGGATTTACTAGCCCATGCTGAGATACATGCTAGGTTTCAGCCATTTAAgTGCATGCTTTGTGGTGAAACCTTTTTAGAAGAGGCGACCATTAAAAAACACTTGACTAACGTACACAGCTCTGAAATGACTCCAAATTCCTGTAGGCTATGCGGTAAACAATGCAGGGACGGTAGAGCTCTAATGAAGCACGCTTGGGATCATTCCAGGGAGAAGAATCACTCGTGCTCTAAATGCGGGAAAACCTTCCACAATAAGGCTAGGCTTAAACGCCACATGGTTTCCCATCGGAATAAATCTGTAACTTGCGATGTTTGCCACGAAGAATTCCCCGATGGACGTTCATTGATGAATCACAGGCATTCACACACAAACTCTTCAGGACGGCTGTTTCCCTGTCATGAGTGTGGAAAAACCTTTGGTTCTAGGAGCTCACAACAAATACACATTCGAATTCATACTGGAGAAAGACCTTACGGCTGTCGGTTTTGTTGGAAAGCCTTTGCTGATGGTGGGACACTGAGAAAGCATGAACGAATTCATACAGgggaaaaacCCTATGCTTGTTCCGTTTGTCCTCGAGCATTTAATCAAAGGGTGGTTTTAAGAGAACACATCAGATCGCACCATTCAGCTATAGACAGTAAAAGGGGGACTTATTATTGCACTGTCTGCTCTGATGTTCTTCCATCATCTGTAGAACTTATCCAGCATTTAATTCATCACAGCGATATGAATACAGCCATGCAAAGGCAACCAATTACTGGCCCCCGAAAATATAAACGACGCCGAAAGCTAAAACCGCATGAAATTGAACGTCTTCGAAATGAAAAATCGAACAACAGTGACATCGAATATTCAGATCTCGATATGGGTACTGTTGATGATCTTCTCGGTataaccaataaaaataaacgtaaCATTCGTTCAATAAATCCTTCGACATCTTCAACAGCTAATGAGACAATCACACTATCAGGACGTAGTAGAAAGTACTCAGGGAATTCAGATAAAGGAACTAGCTGCTGGCAGAATAAGCTTATGTCGACTGCAACGGAGGATCCATACAATTCAGTTTTTCAGAATTTGGAGAACACTTTGAATAATTTGGATTCTTTGGTTGTTGGAAATACGAATACAACAACAGCCCCAGTAGCAACCACTCCAAAGCCTTCAAAAACGTCAACAAAAAGGAAGACACCTGTTAAAGTAGAAACAGTAGATAAACCGTCTAGACCTAAAATGATTCACACTCAGAAGACTAGAGTTGCTGTCGAGGATGGTAAGAGAAGGACGAGGACATTGATTACGAAAAGCGAACCAGTTGAGATTGATGATCAACTGTTCCATCAATTTGATCGCTCTAAAACTGGCCGGAAGAGGGATAATAGCACTACAAGTGTTAATAGCGATTTTGACTTGATACTGCAGGAAACAGTACAAGACCAAACTATTCCAATGATTAAGAGGGAACAACAATCTACATCTCGTAGTGAATTTTTTGACGCGCAACTGCTTCTGGAAGCAGCGTCACTGCGCAAAGAAATGGACAAATATAATCCTGATGTAGTAAATGATCTTGAAGAGATTTTGAGATCtcctataaaaaaatcttcacCACCTGTGGCATCAGCACCAAGTGTTGCATCAAGTTTTCAACCGGAAATTGTAGAAGAACCACCTCAAGAAGATTTACGGCGTTCTTCACGTATAAAACGTTCCTTGcccaatagaaaatatttaggttTTGAAACCCCATCTAAGCCTTCAACAACTACAAAGAACTCAACATcgccgaaaataaaaattgaaaagatagATATCATGGagataaaacaagaaaagtcTGAACATCCTCCTCCAGATGTAAAaccgaaaatcgaatatttccAATGTGAGATGTGTTCCTTAACGTTCTCTGACCGGGCACAGTTGCTTGTACATGTACCGATTCATATATAA
Protein Sequence: MDNTGYQIQWVQDIENDSQIVSEEVITIDSQSEEAESNAPQYFVQEISSIPTSLDQIAAENLIYMAQDGQVTTMDGLIDQGTDNNDTQNYSEHQYFECQVTEEVITDDWVQQQGEERVEIPVDQLCGSGGGDPQLVEDLDVPLPTDQDEYTALRPYPCDFCSRRFRKKASLMNHMIAHQNDRPHVCNLCGARYVRRNDLLIHLKIHAQVPDDKMDDIDDNYFSDHIEARPPRQNEYYDHEDYEERPKPKTKPRSKRMKVVKEEVHFSDHEQIVEETIKEGEHIERFPITDPRKPFVCQQCGVGFAREKALLSHSRIHGSDSPYECVNCSEMFWDMNALNEHQRTHHFEASNSEYEPENDEESESENDSKYGDFYCNVCGMSFHRQDLLKRHSKTHVKRELVEGDSRHCCNVCGENFAEALDLLAHAEIHARFQPFKCMLCGETFLEEATIKKHLTNVHSSEMTPNSCRLCGKQCRDGRALMKHAWDHSREKNHSCSKCGKTFHNKARLKRHMVSHRNKSVTCDVCHEEFPDGRSLMNHRHSHTNSSGRLFPCHECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSAIDSKRGTYYCTVCSDVLPSSVELIQHLIHHSDMNTAMQRQPITGPRKYKRRRKLKPHEIERLRNEKSNNSDIEYSDLDMGTVDDLLGITNKNKRNIRSINPSTSSTANETITLSGRSRKYSGNSDKGTSCWQNKLMSTATEDPYNSVFQNLENTLNNLDSLVVGNTNTTTAPVATTPKPSKTSTKRKTPVKVETVDKPSRPKMIHTQKTRVAVEDGKRRTRTLITKSEPVEIDDQLFHQFDRSKTGRKRDNSTTSVNSDFDLILQETVQDQTIPMIKREQQSTSRSEFFDAQLLLEAASLRKEMDKYNPDVVNDLEEILRSPIKKSSPPVASAPSVASSFQPEIVEEPPQEDLRRSSRIKRSLPNRKYLGFETPSKPSTTTKNSTSPKIKIEKIDIMEIKQEKSEHPPPDVKPKIEYFQCEMCSLTFSDRAQLLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01461350;
90% Identity: iTF_00628579;
80% Identity: -