Basic Information

Gene Symbol
Arid2
Assembly
GCA_959613345.1
Location
OY390708.1:12834459-12843639[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.4e-23 1.6e-19 71.4 0.0 2 89 44 129 43 129 0.95
2 2 0.11 5.4e+02 2.4 0.0 31 82 666 720 651 724 0.75

Sequence Information

Coding Sequence
ATGACTACAACGGAAATTAAGGAGGAGCCAGGCGCCGGAGTAGCCCCCCAAAATGAGGATAGCACAAGCAATATAAGCAAAACAGCGAGAAAATCTGGCCGCGTCGAAAACGTTCCCGAGCCCCGCGACAGAGAAGTCTTTTACAAGGATCTCTTGAATTTTCATGAAAGCAGAAACACCCCGATAACGAGACTCCCAAAAATCAATGGCTACGAGGTGGACATGCACAAGCTTTACGGCGAGGTCACTTCTCGCGGCGGCTGGCTGAAGGTGAACATCCGCAACGAATGGGACGACCTGCTCCCGGTGCTGGGACTCAAGTTGAAATGCGTGAACGCCGCGGTAGCCCTCAAGCAGATATACACGCGGTACCTTGATAAATTTGAGCGGGCCAACTTCCTAGGAGAGGATCCTGACAAGCACGACGAACCCGAGGAGGAGGGCCGCCACAAGAAATGGTCTTCGAAGAACTTCCACTCGGTGCCAATGACCTACAACTACAATCAGCACAGTGTCTCCGATCAGCTGCGGGTCATTCACAAACTTTCGACCGATCTCTACAAGACCTCCGAGTACGAGAAGCTGCTGCTTTCGCTGATGTCGCCGTTGCCCAACGAGCAGGACTTTGCTATCAACGTCTGCACCCTCATGGCTAATGAAAGCAAGCACACCCTCAAGATCGACCACTGCCCTAAGCTTCTCGACGCCTTAATTGCCCACGCGGGTGTTTTTTGCCATTTTACTATGAGAGATCTGTTTTACGAGCTCTACACAAAAATACGGCGCCATTCGTTGCAGTCCTTCTGGAATGATTGCTTGCATGATAAACCACAAATCCTGGAATTATCGTACGACGATTACTTTCAGTCACCGgatgaaaaatttgttgataatGGAGCTGGTCGCCCACCATTACGTTTACCAGTTCGGGAAGAGCTCCAAGATGGTTTAAACGCATCCCTTGAGGACATTCATGTCGACTACACACGATTGGATTTTCTTGCTTTGGGCCGTGGCTTGGGTACCCACGATTACATTGGACAGAGAGTTAATCAGGTTGCGTCgattataagaaatttaagcTTCTTCGAAGAAAACGCCTTGACTTTGGCTAAGAACAAGACGTTTATCCGTTTCCTGGTAATGTGCTCCAACGTGCGATGGGGAAACATTCATCACATGGCCTTGGATGTATGCGGCAACATAGCGACTGAAATGGAATTGGCCGATCCAACATCAGACGACTTAACACGATGTCTAATGTCCACTATTTGTGAGGGGTTAGAAGGGCACGATAGAGGAGTTATTATAAGTTGCTTAGAGATTCTTTACAAGCTTTGTCAAAAGGACATCAACGAGGAACATATTCACAAATGTCTCGATCAGAAGGTTTACAATCAAATTTGCTTGTACCTTTCATTAAACGATATAATGCTTTTGTTGTATACTTTGGAGTGTATATACGCCCTTAGCTCTTTAGGTCACCGGTCTTGTACTCAACTGATCCAAGTTAGGGGCATTGTTGATACTTTGGTTTCATTAATTACTGTAGAggctCAAAGTTATGGTCCCGATGGCTGCATATTAATGAGGGTTGTTGAAACAGTGCCGGGAAATATGCTCCCTATGGTTGCTCAGAACATTGCAAAATTGCAGACTGCTGCTATGGCTGGCCAAGTTGGTGAACATCATTTGCAGCAATCGGCAATCACAAATCATTCCGACAGTATGGGAGTAAATATGAACAGCTGCGATTCCTCTAGAGATCATCAATCTAGCGAAAACATTAACCCTACAGCACCGCCTACGAATATTCGTGTTGTGCAGACTTCACAAACTCCTGCTCTTAGCTCACCACAACAAAGTACGTCAACAAACGTTACACCAATCAAGCAAACACAGCAGCAGATAACACAAgaAAATGAGCAGTTCGCAGTAGCATGGTTGGCAGCTACTTTTGAAGTAGTTCCTTCTGTACTCAGTCGCATTGAACAACAGGACCTTTATAAAATGTATCTCGCAGCGACGCAAAAACACGGTAGACGGAGTGTGACTCAGGGGAGTTTTCCACGTTTAGTAAGAACTGCTTTTGGTACTCAATCTGGGCCAACATTGGTTAAAACAACAGAACCTAGTGGGACAATTTCAAATGCGTATTACTACATACGTCTTCGGGCAAGAGCAAATCCACTTcccattcaaataaaaaccacaACTACTCAACTCCCTCAAACAAGTCCAATTGGTAAATCTTCAAAAGGGCAGAAAATGAAGCAAACTAAAAAAAGTCAAATGCAACAAAAGGTATTATTGCAAAAAGCACAAGCACAACCAGCTCAACAAGTAGTCCCAGCGCAGCAGTTGCCTGTTCCCATTCAACCGCACCCACCTATAACTCAACACCAGACTGTTATGCAGCCTCAACATACCGTTATTACGTCAACTCCGGATAAAGCTTTTATTAATAAGATGCCCGGAAAGAATATTgCGACGTCGCATCAGCCTGCACCACAAATTATTACTGCAAATCCAGGAAATGCAGTAATAGCGCATTCACCAAATCAAGTAACAATTGctcagcaacagcagcagcaagcATCATCACTTGTAAAAACTTCGACGGCTATTCAAACGTCGATAATGACCCCGACAACTGCAAATGGAAATAGTGTCGCAAGTTCTTTAATTAAGAGCCTCTTGGCTAACAAGGTCGCACAGCGTCAACATTTGCAGAAGCAAAAAGAACTGGCccaacagcaacagcagcaacaacaacaacaaactcATACGATTGTTTCAACGATGAAGGCCCCACCCGGATTAACGTTACCAACGACCACAATAAGTGCGTTGGTGAACAATCCGGTCATACAATCTACAGCAGTCAAAGTTGGCCAGACAACTATAAAAGCGATTAATGCCACACATATGGTACCAACGACTATCATGGAAAAGAAAACCACTCAAATTGGTGAAAGTGGGGAGATTACTTCTTGGGAACCTGTGCCACCACCAATGCCTGTGAGTGTGTCCTCCCGCCCGCAAAAtgttaatgttattattggtGTAAATAGTGAAGATTCAAATTCGACTGGGAATAATTCCGTTGCAAGTATTATAAGTTCGGCACAGATTAATACAACTGATGATGGAGAGGGGTCTGAAATAAGTTTTGAGGGTTTACTGATTCCAAAATCTGGTGGATCCTCGGTgattgaagatgaaaattctaaagattCTTTAAATAAGGGACTACACGTAGTAAACGCGAATCAAATGTTGGTCGATTTACTCGATAAAAAATCACCAGATCCACCAATGACTCCAGGAATAAAGAGGAAATTAGATGATGATAGCATGGAAGGTTCAAGTAAAAGACCTTCTTTGGATGTCGAAATAAATGATCAAGAGGATGAAGAGTTAAAAGTAACTCCGTCAAAGAATGCTGCAAATTTATATGCTGAAATGGCTGCTTCTATTTTAGAAGATGAGGATTTAGAAGAGGAGCCACAAATGCAGCAACAAATACAGCAACCTACACCGCAGACAATTCAAACCGCAGTTACACAAATTCAAACTCAAATTCAGCCCCAAATTCAGCAAGTGCCACCTCAAATTCAAACGCCGGTTATACAGAAAACGGCAGATGCTCAAAAACAGTTGATAACTATGCCCATGCCGTTGCAGCGTCAAATAATCGTAACACCAAATAATCAGCACCAAGTTATTTTGTCTCAGGCACCGTCTGGTAATCAACAAGTTCAAACGCAAGCTACAGCAACTATTAAGACAGAATCTGGACTGCAAACTGTGCCACTCATTTTACAGAAGCAAGTAGGTCCTGGCGGACAGCAAATTATTCAACCAGTGATTCAGTCCTCCCAGCCACAAACACAATATGTTCTGGCGACAAATCCTCAAGGTCAGACTTATTTAGTGGCACAGCAGCCCCAACCGACGCAGACGGTGCTCGTTACGCAGACGCCGCAGCAGCAAGGGACTCCGAGTAAGACCATTATCATTTTGCAGCAGCAAGGAGGACCGCCACAGGCAGTGGCTGCACAACAGCAGCTAATTGGACCACCTGGCACGCCACAAAAGGTCATAATGACGACGCCCCAAGGACAGCAAATGATTGTGACCCAAGTGCCTCGACCAATGCAACATCAAATTGTAATGAATCACCCATCAACAAGTTCAGCGCAAAATGTTGTTATTACGCAATCTCCTCCAATTCAGCAGCAAGTTCAACATATTCAGCCCCATCAGCAGCTACAGaaacaaatacaaattcaGGCAAGCCAACAGATGCAAATCCAGAACAGTTCACAGCAACAAgctgaaaaaattgttttgtcaCAGTTGCCGCATATTCCTGCGACTATAAAATTGCATCCCCATCAAAGTCAAACAACTCAAACACAAACAACCCCGAAACCATTGCCAGCTAAATCACCAGCGCTGGTGCAACAGTCACCGGTCTCTATTGTTGCGCAGCAAAGCCATGTTCAACAGCAGGTGATTCAGACACCCACAAAAGGGCCAGAGCGCAAGATTTTTATTGGTGGCAACGGATCAATTGAGCTTACTGAGGCTTCACAACAAAATCCAATCATCGCGTCAGTTACTTCAGGAACTCAAACTATCATTACTCAACcacaacagcaacaacaacagcagcagcagcaacagcagcaacagcaacaacagcagcaacagcaacaacagcaacagaCAATTCAAGCAACTATGGTCCAACAAACAATCCAAGGAAATCCTCCTGGTCTGGTAGCTCACCAACCCTCGAACCTTATCGCTCCTCCACCACCTCCTCCAGCTCCTGCTAAGCCACAAAAAACTTTAGCTGATATCAAATCTGAGGAGGAAATTGTGGATGCAAACTGGTTGTGGGTCTGCGACTGGAGAAATTGTCCAAGGAAAAAATTCAAGTCTATCAATGATGTTTATCGCCACGCGTGCATCGTGCACTGCCCGGAATCTCTTGATCCAAGTGCTGAGATCTACTGCCAGTGGGGTGCGGGTCCTGGTCTCTGCGATAATATTCCTCGAAAGAGATTTTCATTAATGACCCACTTGCTGGATCGACATTGCACTCCAGAGGCTTTTAAGGCAGCTGTACAAAGGCGGCTTGTAACTGGCATTCAGCCCGGTGTTGCTACGCAGCCAGTAACAATCATTAAAAATGCGCAAGTTCTTACCTGTGGCACCGATTCGAGAGGTACTTCGTCCCCAGCTTTGTCTACTTCTTCAACGAGTTCCCTTCCGCCGGCAGCTAGTGCCGCAATGCATGCAATTAAGAGGCATACCGCCGATTTTGCGAATCCTAAAGAATTAATGGACGAAAATGAAGGTCCTGTGACAAAAAGTATTCGACTAACAGCAGCTTtgatattgcgaaatttaGTAACATACACATCAACAGCAAAAAAAAATGTCCGCTGTTACGAACCACATTTGGCTGGTGTAGCATTAAGTAATGTTGAATCAAGCCAAGCTATTTCCCAGATTCTTTACGAAATGAACAACTAG
Protein Sequence
MTTTEIKEEPGAGVAPQNEDSTSNISKTARKSGRVENVPEPRDREVFYKDLLNFHESRNTPITRLPKINGYEVDMHKLYGEVTSRGGWLKVNIRNEWDDLLPVLGLKLKCVNAAVALKQIYTRYLDKFERANFLGEDPDKHDEPEEEGRHKKWSSKNFHSVPMTYNYNQHSVSDQLRVIHKLSTDLYKTSEYEKLLLSLMSPLPNEQDFAINVCTLMANESKHTLKIDHCPKLLDALIAHAGVFCHFTMRDLFYELYTKIRRHSLQSFWNDCLHDKPQILELSYDDYFQSPDEKFVDNGAGRPPLRLPVREELQDGLNASLEDIHVDYTRLDFLALGRGLGTHDYIGQRVNQVASIIRNLSFFEENALTLAKNKTFIRFLVMCSNVRWGNIHHMALDVCGNIATEMELADPTSDDLTRCLMSTICEGLEGHDRGVIISCLEILYKLCQKDINEEHIHKCLDQKVYNQICLYLSLNDIMLLLYTLECIYALSSLGHRSCTQLIQVRGIVDTLVSLITVEAQSYGPDGCILMRVVETVPGNMLPMVAQNIAKLQTAAMAGQVGEHHLQQSAITNHSDSMGVNMNSCDSSRDHQSSENINPTAPPTNIRVVQTSQTPALSSPQQSTSTNVTPIKQTQQQITQENEQFAVAWLAATFEVVPSVLSRIEQQDLYKMYLAATQKHGRRSVTQGSFPRLVRTAFGTQSGPTLVKTTEPSGTISNAYYYIRLRARANPLPIQIKTTTTQLPQTSPIGKSSKGQKMKQTKKSQMQQKVLLQKAQAQPAQQVVPAQQLPVPIQPHPPITQHQTVMQPQHTVITSTPDKAFINKMPGKNIATSHQPAPQIITANPGNAVIAHSPNQVTIAQQQQQQASSLVKTSTAIQTSIMTPTTANGNSVASSLIKSLLANKVAQRQHLQKQKELAQQQQQQQQQQTHTIVSTMKAPPGLTLPTTTISALVNNPVIQSTAVKVGQTTIKAINATHMVPTTIMEKKTTQIGESGEITSWEPVPPPMPVSVSSRPQNVNVIIGVNSEDSNSTGNNSVASIISSAQINTTDDGEGSEISFEGLLIPKSGGSSVIEDENSKDSLNKGLHVVNANQMLVDLLDKKSPDPPMTPGIKRKLDDDSMEGSSKRPSLDVEINDQEDEELKVTPSKNAANLYAEMAASILEDEDLEEEPQMQQQIQQPTPQTIQTAVTQIQTQIQPQIQQVPPQIQTPVIQKTADAQKQLITMPMPLQRQIIVTPNNQHQVILSQAPSGNQQVQTQATATIKTESGLQTVPLILQKQVGPGGQQIIQPVIQSSQPQTQYVLATNPQGQTYLVAQQPQPTQTVLVTQTPQQQGTPSKTIIILQQQGGPPQAVAAQQQLIGPPGTPQKVIMTTPQGQQMIVTQVPRPMQHQIVMNHPSTSSAQNVVITQSPPIQQQVQHIQPHQQLQKQIQIQASQQMQIQNSSQQQAEKIVLSQLPHIPATIKLHPHQSQTTQTQTTPKPLPAKSPALVQQSPVSIVAQQSHVQQQVIQTPTKGPERKIFIGGNGSIELTEASQQNPIIASVTSGTQTIITQPQQQQQQQQQQQQQQQQQQQQQQQQQTIQATMVQQTIQGNPPGLVAHQPSNLIAPPPPPPAPAKPQKTLADIKSEEEIVDANWLWVCDWRNCPRKKFKSINDVYRHACIVHCPESLDPSAEIYCQWGAGPGLCDNIPRKRFSLMTHLLDRHCTPEAFKAAVQRRLVTGIQPGVATQPVTIIKNAQVLTCGTDSRGTSSPALSTSSTSSLPPAASAAMHAIKRHTADFANPKELMDENEGPVTKSIRLTAALILRNLVTYTSTAKKNVRCYEPHLAGVALSNVESSQAISQILYEMNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2