Basic Information

Gene Symbol
Arid2
Assembly
GCA_949715965.1
Location
OX454319.1:16170869-16183776[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-23 6.1e-20 72.8 0.0 2 89 44 129 43 129 0.95
2 2 0.18 7.6e+02 1.9 0.0 31 81 663 716 647 720 0.72

Sequence Information

Coding Sequence
ATGACAACAACAGAAATCAAGGAGGAACCGGGCGCCGGAGTAGCCCCCCAAAACGAGGACAGCACGAGTAATTTAAGCAAAACAGCGAGGAAATCTGGCCGCGTCGAAAACGTTCCCGAGCCCCGCGACAGAGAAGTCTTCTACAAGGATCTCGCGAATTTCCATGAAAGCAGAAACACCCCGATAACGAGACTCCCAAAAATCAATGGGTACGAAGTGGACCTGCACAAGCTCTATGGCGAGGTTATTTCCCGAGGTGGCTGGCTGAAGGTGAACATCCGCAACGAATGGGACGATCTGCTCCCCGTCCTGGGGCTAAAGCTGAAGTGCGTGAACGCCTCGGTGGCCCTTAAGCATATTTATACGAGGTATTTGGATAAGTTCGAACGGGCCAACTTCCTCGGTGAAGACCCCGACAAGCATGACGAGCCCGAAGAGGAGGGACGCCACAAGAAGTGGTCCTTGAAGAATTTCCACTCCGTGCCCATGACGTACAATTACCACCAGCATAACGTGTCGGAGCAGCTCCGGGTCATTCACAAGCTGTCGACTGATCTTTACAAGAGCTCTGAGTACGAGAAGCTCCTGCTTTCGCTAATGTCGCCCCTCCCGAATGAGCAGGACTTCGCTATCAACGTTTGCACCCTAATGGCGAACGAAAGCAAACACACCCTCAAGATTGACCACTGCCCCAAGCTTCTGGACGCCTTAATTGCTCACGCGGGAGTTTTCTGCCATTTTACTATGAGGGATCTGTTTTATGAGCTTTATACGAAAATACGACGTCATTCTTTGCAATCCTTCTGGAATGATTGTTTACACGATAAACCCCAAATCCTAGAGCTATCATACGATGATTATTTTCAGTCACCGGATGAAAAATTTGTTGACAATGGAGCTGGACGTCCACCATTGCGTCTACCAATACGGGAAGAGCTCCAAGATGGATTGAATGCATCACCTGACGAAATTCGCATTGATTACACTCGACTTGATTTTTTAGCTTTGGGTCGTGGTTTAGGAACTCATGATTACATTGGGCAGAGAGTAAACCAGGTCGCGTCCATTATAAGAAATTTAAGCTTCTTCGAAGAAAATGCTTTGACGTTGGCTAAGAATAAAACATTTATCCGTTTCTTGGTAATGTGCTCCAACGTGCGATGGGGAAACATTCATCATATGGCATTGGATGTATGTGGTAATATAGCAACTGAATTGGAATTGGCTGATCCAACATCAGACGACTTAACGCGGTGTTTAATGTCCACCATTTGTGAGGGTTTGGAAGGGCATGATAGAGGAGTTATTATTAGCTGTTTAGAGATTCTATACAAACTTTGTCAAAAAGACATCAACGAGGAACATATTCATAAATGTCTCGATCAGAAGGTGTATAATCAAATTTGCTTATATCTGTCATTGAACGATATAATGTTATTGTTATACACGTTGGAGTGTATATACGCACTTAGCTCGCTGGGACACCGGTCTTGTAATCAATTGATCCAAGTCAGGGGCATCGTTGATACTTTGGTTTCGTTGATTACTGTAGAggCTCAAAGTTACGGCCCTGATGGCTGTATATTAATGAGGGTTGTTGAAACAGTCCCAGGAAATATGCTGCCTATGGTTGCTCAGAACATCGCAAAATTGCAGACTGCTGCTATGGCTGGGCAAGTTGGTGATCATCATTTACAACAGTCGGCAATAACAAATCATTCCGATAGTATGGGAGTAAATATAAATAGTTGCGATTCTATCAatcATCCATCCAGCGATAGCCCTACAGCACCACCGACAAATATTCGTGTAGTACAGACTTCACAAACTCCTGCTATCGGTTCGCCGCAACAAAGTACGCAAACAAATGTTACACCAGTCAAGCAAACACAACAGCAGATAACTcagGAAAATGAACAGTTCGCAGTAGCATGGTTGGGAGCTACTTTCGAAGTAGTTCCATCTGTATTAAGTCGCATCGAACAGCAGGATCTCTATAAAATGTATCTCGCAGCAACGCAAAAACACGGTAGACGAAGTGTAACTCAAGGAAGTTTCCCACGTTTAGTAAGGACTGCTTTTGGTACGCAAACTGGGCCAACATTGATTAAAACAACTGAACCTGGTGGGACAATTTCAAATGCATATTATTACATACGTCTTCGGGCAAGAGCAAATCCCCTTCctatacaaataaaaaccatAACTACTCAGCTCCCACAAACAAGTCCAATTGGCAAATCTCCAAAAGgttcaaaacaaaatgcaaaACAATCTAATGAGATTATTATTAAAACGAAAGGCGAACTTGGACAGAAAATGAAACAAACTAAAAAGAGTCAAATGCAACAGaaagtattattgcaaaaaGCACAAGCGCAGCCAGTTCAACAAGCAATCTCAACGCAACAGGTGCCTGTTCCAATTCAGCCACATCCGCCTATAACACAGCAGCAGACAGTTATGCAGCCTCAACATACCGTGATTACTTCAACTCCAGATAAAGCTCTAATAAATAAGATGTCCGGGAAGAATATTGTAATCAATAAAactataattgCAACACAGCATCAGCCAACGCCGCAAATTATTTCTGCAAATCCGGGAACTGCTGTAATTGCGCATACACCAAATCAAGTAACAATTgctcagcagcagcagcagcaagcaTCACAACTTGTAAAAACTTCGACGGCTATACAAACGTCGATAATGACTCCGACAACTGCAAATGGAAATAGTGTCGCAAGTTCTTTAATTAAAAGCCTCCTGGCTAATAAGGTAACACCAACAGCTACTGAAGTATCCGAATCGAATGCGAGTGCAGCTCCAAATAATCCAAGTTGTTTGATTACCCAAAATGTTAATATGCATCAGGTCGCACAGCGTCAACATTTGCAGAAGCAAAAAGAACTGGctcaacagcaacagcaacaacagcagcaacagcagcagcagcagcaacagcaacaacaacagacTCATACAATTATGTCAACAATTAAAGGTCCACCAGGGCTAACTTTACCTACGACCACTATAAGTGCATTGGTAAACAATCCGGTTATACAGTCTACAGCGGTTAAAGTTGGTCAGACAACTATAAAAGCAATAAATGCTAATAGTGTTATACCAACGACTATTATCGAAAAGAAAACCACTCAAATTGGTGAGGGCAGTGAGATTCCTTCTTGGGAGCCTGTGCCACCATCAATGCCTGTGAGTATGTCCTCCCGCCCGCAAAATGTTAATGTTATTATTGGTGTAAGTAGTGAAGATTCAAATTCGACTGGAAATAATTCTGTTGCATCGAGCATTATAAGTTCGGCACAGATTAATACAACTGATGACGGTGAGGGCTCTGAAATAAGTTTTGAGGGTCTGCTTGTGCCAAAATCTGGTGGATCCTCAGTGATCGAAGATGAAAATTCTAAAGATTCTCTAAACAAGGGAATTCATGTAGTAAATGCAAATCAAATGTTGGTCGATTTACTTGACAAGAAATCACCAGATCCTCCACTAACTCCGGGAATTAAGCGGAAATTAGATGATGATAGCATGGAAAGTACAAGTAAAAGATCTTCTTTGGATGTTGAATTAAATGATCCCGAGGATGAAGAGTTAAAAGTAACTCCTTCAAAGAATGCTGCAAATTTATATGCTGAGATGGCTGCTTCTATTCTAGAAGATGAAGATTTAGAAGAGGAGTCACAAATGCAGCAATCAACAtcacaaacaattcaaagtgcagtTACCCAGATTCAAACACAAATTCAGCCCCAAATGCAGCAAGTTCAGACCCAAATACAGACGCCCGTTATACAAAAAACGGCAGATGCTCAAAAACAGTTGATAACTATGCCCATGCCGTTGCAACGTCAAATAATTATGACACCAAATAATCAACATCAGGTAATTTTGTCACAGGCACCGTCTGGTAATCAACCAGTCCAAACGCAGGCAACAGCAACAATTAAGACAGAATCTGGACTGCAAACAGTGCCATTGATTTTACAGAAGCAAGTAGGTCCTGGCGGACAGCAAATTATTCAGCCAATGATTCAGTCGTCCCAGCCGCAAACACAATACGTTTTGGCGACAAATCCTCAAGGTCAGACCTACTTAGTGGCACAACAGCCCCAGCCGACCCAGACGGTTCTAGTTACACAGACGCCGCAGCAACAAGGGACTCAGAGTAAGACCATTATCATTTTGCAGCAGCAAGGAGGACCAGCACAGGCAGTGGCTGCACAACAGCAGCTAATTGGACCACCTGGCACGCCACAAAAGGTCATAATGACGACACCTCAAGGACAACAAATGATTGTGACACAAGTGCCTCGACCAATGCAACATCAAATTGTAATGAATCATCCGACAACAAATACTCTGCAAACGAGTTCAGCGCAAAATGTTGTTATTACACAATCTCCCCCAATTCAGCAACAAGTTCAGCACATTCAACCCCATCAGCAGATGCAGAAACAAATTCAAATCCAAGCTTCGCCACAAATGCAAATCCAGAATAGTTCACAGCAACAAGCTGCTGAAAAAATTGTGTTGTCGCAATTGCCGCATATTCCTGCTACTATTAAATTGCATCCCCATCAAACGCAAACAACTCAAACACAAACAATTCCTAAACCATTGCCAGCTAAATCACCAGCATTGGTGCAACAGTCGCCCGTTTCCATTGTTGCTCAACAGGCTCAGATGCCACAGCAGTTGATTCAGACTCCTACAAAAACTCAAGAGCGAAAGATCTTTATTGCTGGGAACGGAACGATTGAACTTTCTGAGGGTACACAACAAAACCCAATAATTGGGTCAGTTACTTCTGGAACTCAAACTATCATCACCCAAccgcaacagcagcagcaacaacaacaacaacaacaacagcagcagcagcagacgATTCAGACCACAATGGTTCAACAAACGAGTCAAGGTGTGGCTCAGGGAAATCCTCCCGGTTTGGCTGCTCACCAACCCTCGAATATTATAGCTCCCCCACCTCCACCCCCGAATCCTATAAAACCCCAAAAAACTATAGCTGATATCAAATCTGAGGAGGAAATTGTGGATCCAAATTGGTTATGGATCTGCGACTGGAGGAATTGCCCAAGaaaaaaattcaagtcgATCAATGATGTGTATCGACATGCATGTATTGTGCATTGCCCAGAATCTCTTGATCCAAGTGCCGAGATCTACTGCCAGTGGGGTGCGGGGCCTGGTCTTTGCGATAATATTCCTCGAAAGAGGTTTTCACTAATGACCCATTTATTGGATCGCCATTGCACTACAGAgGCTTTTAAGGCAGCAGTACAAAGGCGACTTGTAACGGGCATTCAGCCCAGTGTTGCTACACAGCCAGTGACAATCATTAAAAATGCGCAAGTTCTTACCTGTGGCACTGATTCTAGAGGCACATCATCTCCAGCTCTGTCTACATCTTCGACGAGTTCTCTTCCGCCAGCAGCCAGCGCGGCAATGCATGCAATTAAAAGGCACACCGCCGATTTTGCAAATCCTAAGGAATTAATGgaTGAAAATGAAGGTCCTGTTACTAAGAGTATTCGATTAACAGCAGCTCTTATATTGCGGAATTTAGTTACATACACATCAACAGCTAAGAAGAATGTTCGCTGTTACGAGCCACATTTAGCAGGAGTAGCCTTAAGTAATGTGGAATCGAGCCAAGCTATTTCCCAGATTCTTTACGAAATGAACAACTAG
Protein Sequence
MTTTEIKEEPGAGVAPQNEDSTSNLSKTARKSGRVENVPEPRDREVFYKDLANFHESRNTPITRLPKINGYEVDLHKLYGEVISRGGWLKVNIRNEWDDLLPVLGLKLKCVNASVALKHIYTRYLDKFERANFLGEDPDKHDEPEEEGRHKKWSLKNFHSVPMTYNYHQHNVSEQLRVIHKLSTDLYKSSEYEKLLLSLMSPLPNEQDFAINVCTLMANESKHTLKIDHCPKLLDALIAHAGVFCHFTMRDLFYELYTKIRRHSLQSFWNDCLHDKPQILELSYDDYFQSPDEKFVDNGAGRPPLRLPIREELQDGLNASPDEIRIDYTRLDFLALGRGLGTHDYIGQRVNQVASIIRNLSFFEENALTLAKNKTFIRFLVMCSNVRWGNIHHMALDVCGNIATELELADPTSDDLTRCLMSTICEGLEGHDRGVIISCLEILYKLCQKDINEEHIHKCLDQKVYNQICLYLSLNDIMLLLYTLECIYALSSLGHRSCNQLIQVRGIVDTLVSLITVEAQSYGPDGCILMRVVETVPGNMLPMVAQNIAKLQTAAMAGQVGDHHLQQSAITNHSDSMGVNINSCDSINHPSSDSPTAPPTNIRVVQTSQTPAIGSPQQSTQTNVTPVKQTQQQITQENEQFAVAWLGATFEVVPSVLSRIEQQDLYKMYLAATQKHGRRSVTQGSFPRLVRTAFGTQTGPTLIKTTEPGGTISNAYYYIRLRARANPLPIQIKTITTQLPQTSPIGKSPKGSKQNAKQSNEIIIKTKGELGQKMKQTKKSQMQQKVLLQKAQAQPVQQAISTQQVPVPIQPHPPITQQQTVMQPQHTVITSTPDKALINKMSGKNIVINKTIIATQHQPTPQIISANPGTAVIAHTPNQVTIAQQQQQQASQLVKTSTAIQTSIMTPTTANGNSVASSLIKSLLANKVTPTATEVSESNASAAPNNPSCLITQNVNMHQVAQRQHLQKQKELAQQQQQQQQQQQQQQQQQQQQTHTIMSTIKGPPGLTLPTTTISALVNNPVIQSTAVKVGQTTIKAINANSVIPTTIIEKKTTQIGEGSEIPSWEPVPPSMPVSMSSRPQNVNVIIGVSSEDSNSTGNNSVASSIISSAQINTTDDGEGSEISFEGLLVPKSGGSSVIEDENSKDSLNKGIHVVNANQMLVDLLDKKSPDPPLTPGIKRKLDDDSMESTSKRSSLDVELNDPEDEELKVTPSKNAANLYAEMAASILEDEDLEEESQMQQSTSQTIQSAVTQIQTQIQPQMQQVQTQIQTPVIQKTADAQKQLITMPMPLQRQIIMTPNNQHQVILSQAPSGNQPVQTQATATIKTESGLQTVPLILQKQVGPGGQQIIQPMIQSSQPQTQYVLATNPQGQTYLVAQQPQPTQTVLVTQTPQQQGTQSKTIIILQQQGGPAQAVAAQQQLIGPPGTPQKVIMTTPQGQQMIVTQVPRPMQHQIVMNHPTTNTLQTSSAQNVVITQSPPIQQQVQHIQPHQQMQKQIQIQASPQMQIQNSSQQQAAEKIVLSQLPHIPATIKLHPHQTQTTQTQTIPKPLPAKSPALVQQSPVSIVAQQAQMPQQLIQTPTKTQERKIFIAGNGTIELSEGTQQNPIIGSVTSGTQTIITQPQQQQQQQQQQQQQQQQTIQTTMVQQTSQGVAQGNPPGLAAHQPSNIIAPPPPPPNPIKPQKTIADIKSEEEIVDPNWLWICDWRNCPRKKFKSINDVYRHACIVHCPESLDPSAEIYCQWGAGPGLCDNIPRKRFSLMTHLLDRHCTTEAFKAAVQRRLVTGIQPSVATQPVTIIKNAQVLTCGTDSRGTSSPALSTSSTSSLPPAASAAMHAIKRHTADFANPKELMDENEGPVTKSIRLTAALILRNLVTYTSTAKKNVRCYEPHLAGVALSNVESSQAISQILYEMNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01460921;
90% Identity
iTF_00937045;
80% Identity
-