Tver004339.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tipula vernalis
Gene Symbol
dl
Assembly
GCA_958295665.1
Location
OY282558.1:35885351-35896209[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.5e-74 1.7e-69 236.5 0.0 1 169 132 302 132 302 0.99

Sequence Information

Coding Sequence
ATGGGTGTTATAGGCCATAGAATCGTTAAACAAAGCTGGATTAGACCTGTTTTACTGAAAGAAATACATTCGGGACATCGAGGTATCGTTAAAATGAAACGCGAACATTTGGACTTTTGCGGCCCAAAATATGgTGATATACCACTGAGTCCACAAAATGGTATGCAACAGGATGACAGTGCCCAAATTAATATAAGTGATGTcaTTGATGTTATTGAACAAACTGATCCCGACGTACGAGGCATGTTTAATCCAAATCCAATTAACGGTGGCGGATCACATCAACCACCAAATCATGGAGGAAACCGTCAAACCCAACAACAACCATCaccttcatcatcatcatcaacaacatcaaataatacaaataataataatcccacAAATGCATATGTTGAGATAATAGAGCAACCAGCACCTAAGGCAATTAGATTTCGATATGAATGTGAAGGACGATCGGCTGGTTCAATACCAGGTGAAAATAGTACACCTGAAAATAAAACATATCCAGCAATCAGAATTAGAAATTATACAGGACGTGCTGTGGTTGTTGTATCATGTGTTACAAAAGATATTCCGTATCGgccTCATCCACACCGCCTTGTTGGTAAAGAGGGATGCAAGAAAGGTGTTTGTACTatggaaattaataatgagACAATGAGTTTAACGTTTAGTAATTTAGGAATACAGTGTGTTAAAAAACGCGATATTGAGGATGCTTTAAGATTAAGAGAAGAAATACGTGTTGATCCATTTCGAACTGGATTCTCACATCGTAATCAACCAGCGAGTATAGATCTAAATGCCGTACGATTATGTTTTCAAGTGTTTATTGGTGGTGAACATCAACCACGTTTTAGTGTACCTTTACCACCAGTAATATCAAATCCAATTTATGACAAAAAAGGTACTAGTGAATTAGTTATAAGTAAAATGAGCGATTGTTCAGCAGATGTTCGGGGTGGCCGTGAAATCATTTTACTATGTGAAAAAGTCGCCAAAGAGGATATTAAAGTTAGGTTTTATGAAGTTGATTATAATGATCAGTTGATTACATGGGAAGCATACGGTGATTTTAATCACACAAATGTGCATAAACAGGTTGCTATATCATTCAAAGTACCAGCTTATcacaatttaaatatagatCAAACAGTTTctgtTAACGTTCAACTAAAACGACCATCGGACGATGTATGCAGTGAGCCACTCCAATTTGACTATATTCCTTGTCCAGGTAGGCGTACATTTTTATCTATGCGACGTAGTCTTGAAGAAAAGGGTAATTTATTCCGTAATATATTATCTGAAGATGCTTTAATATTTGGTAGtacaaatataaaagaaaatcatcAAAACAACGAAGTAATCATACTTGATACACCAACCGAAAATGAAAAAGGTATTATTCCCGAACAAGAGCATAATGTTACCTCGACAGCTGAAGAGATTGTATTCGCCAATTCACAGCCAACGAATGAATCGGCTATGGATAAAACTAACGATTGGCTAAATTCAACACAATTCAGTAATACCATCAGTGATACAACTGATTCGTTTGAACCAAATACAACTTCGGACGAGGATAAAACTCTAACCGAACTATTGGAACAAGTGGCTGAATTAGATGAAATTTATACTGAACATCAAATATTACGGCAAGATCTCAATGATATGAATAATatagatacaaatataaatattaattcaaaccaaaaccaaTTAACTAAAATGGATGTAGATGAGTCTTTTGATGATGCAGCTACTTATACAAGTTTACAAAGAGCATTTAAAAATCCAGTATCAATTATTAATGAGAATTTGCAACAACAATCACAAACTTTACCATCCGAAATGAATCCTCTGatgattaatgaaaataataattacaataccacatatgatattgttgacaatcaaattatattgaatCCAATGGGGCCAATAATAGACGTTGCTTCTTTAAAACGTGAGAAAAACAATGATGAGAATGAGAATGATGAGAAATTACCGCCATTGCCACCGAAACGTATCAAAAAACAAATGCCAATTTTAGGCGATAACAACATTATCATAGAAACAAATATTACAGAGTTATCACGTAGAACTTCAACAAAATGTGATAGAATACGGCCGATCTCCCAGCCAATCATTATAATGAAGACACCAGACTCACCAAATAAAAAGCTACCACCAAAGCCAAATAGCAATAGTAATACTCTACCAAAACAGAAAAAGCCAGGATtcttctcaaaattattttcaagaaaGAAAAGTAAAAGCGATATAAGTGGAACAAATAGTAATAATCTAAGTATCAAGACAACCCCGTTAGGATCACGTGAACCATCTTTagctaattttaatacaaattcaaatcttTCACGTGGTTCATTTTCATCGTTAAGAACATTTccaaatagtaataaagatagTAGTAGTAGTAATGAGAATAGCAATAgtaaagaaaataatgaaaagtcaaaaattaaacCGGTTGGTCGTAGTGTAAGCAGTGTTTCCggaaaacgaccacatttaacaCCCAACATAATCCACATTCCTCTTAAGGGTGACAGCACAAATTCAATACCAGAAAGAAGTGAAAGTGGAACCCATTTATcgttacatgaaaataattctgGATCCCGTTTATTGCATCCAAATGATAGAAGAACCGTAAGTGCTTTACAATTAGCTGATCTTCCTTTACAAGATGGTAATATGGAACTGATAGCCATTGCCGATGCACAAAGCTTAAAGAATTTATGTGAAGGACAATATGGGGTGCAATTAGATCCTTCAGTTGATTTAACAGAGGCGGAACATTATGCTCTATATACATCAGTACCACCACATGCTACCGTCAGTGAATTTGATGAAACATCGTGTTATTATGCACCTGTCGAAGCTGGTGAAATTTTAACACCAGCTGAAGTTGCTAAAAGGCTCACTAACAATATTTAA
Protein Sequence
MGVIGHRIVKQSWIRPVLLKEIHSGHRGIVKMKREHLDFCGPKYGDIPLSPQNGMQQDDSAQINISDVIDVIEQTDPDVRGMFNPNPINGGGSHQPPNHGGNRQTQQQPSPSSSSSTTSNNTNNNNPTNAYVEIIEQPAPKAIRFRYECEGRSAGSIPGENSTPENKTYPAIRIRNYTGRAVVVVSCVTKDIPYRPHPHRLVGKEGCKKGVCTMEINNETMSLTFSNLGIQCVKKRDIEDALRLREEIRVDPFRTGFSHRNQPASIDLNAVRLCFQVFIGGEHQPRFSVPLPPVISNPIYDKKGTSELVISKMSDCSADVRGGREIILLCEKVAKEDIKVRFYEVDYNDQLITWEAYGDFNHTNVHKQVAISFKVPAYHNLNIDQTVSVNVQLKRPSDDVCSEPLQFDYIPCPGRRTFLSMRRSLEEKGNLFRNILSEDALIFGSTNIKENHQNNEVIILDTPTENEKGIIPEQEHNVTSTAEEIVFANSQPTNESAMDKTNDWLNSTQFSNTISDTTDSFEPNTTSDEDKTLTELLEQVAELDEIYTEHQILRQDLNDMNNIDTNININSNQNQLTKMDVDESFDDAATYTSLQRAFKNPVSIINENLQQQSQTLPSEMNPLMINENNNYNTTYDIVDNQIILNPMGPIIDVASLKREKNNDENENDEKLPPLPPKRIKKQMPILGDNNIIIETNITELSRRTSTKCDRIRPISQPIIIMKTPDSPNKKLPPKPNSNSNTLPKQKKPGFFSKLFSRKKSKSDISGTNSNNLSIKTTPLGSREPSLANFNTNSNLSRGSFSSLRTFPNSNKDSSSSNENSNSKENNEKSKIKPVGRSVSSVSGKRPHLTPNIIHIPLKGDSTNSIPERSESGTHLSLHENNSGSRLLHPNDRRTVSALQLADLPLQDGNMELIAIADAQSLKNLCEGQYGVQLDPSVDLTEAEHYALYTSVPPHATVSEFDETSCYYAPVEAGEILTPAEVAKRLTNNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01054091; iTF_01051695; iTF_01052948; iTF_01455437; iTF_01454637; iTF_01458114; iTF_01457107;
90% Identity
iTF_01455437;
80% Identity
-