Tunc017449.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tipula unca
Gene Symbol
YY1
Assembly
GCA_951394425.1
Location
OX596381.1:7017892-7022346[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 1.1 1.7e+02 4.4 1.0 1 23 268 290 268 290 0.97
2 26 0.0017 0.25 13.3 1.0 1 23 322 344 322 344 0.99
3 26 0.0012 0.18 13.8 1.6 1 23 350 373 350 373 0.96
4 26 0.0006 0.089 14.7 0.2 1 23 379 401 379 401 0.96
5 26 6.1e-06 0.0009 21.0 1.3 1 23 407 429 407 429 0.98
6 26 0.00042 0.062 15.2 0.1 1 23 434 456 434 456 0.97
7 26 0.0015 0.22 13.4 3.6 1 23 462 484 462 484 0.97
8 26 0.082 12 8.0 1.4 1 14 490 503 490 506 0.88
9 26 0.0014 0.22 13.5 1.3 1 23 516 539 516 539 0.96
10 26 4.7e-05 0.0071 18.2 0.5 1 23 597 620 597 620 0.96
11 26 1.4 2.1e+02 4.1 0.9 1 19 626 644 626 649 0.71
12 26 6.1e-05 0.009 17.8 3.2 1 23 655 677 655 678 0.96
13 26 0.00017 0.025 16.4 3.3 1 23 684 706 684 706 0.97
14 26 0.019 2.8 10.0 3.0 1 21 712 732 712 734 0.93
15 26 0.051 7.5 8.6 2.8 2 23 771 793 770 794 0.92
16 26 4 6e+02 2.6 2.7 2 23 797 819 796 819 0.94
17 26 0.43 64 5.7 0.2 5 23 828 846 827 846 0.89
18 26 0.0001 0.015 17.1 0.4 1 23 943 965 943 965 0.95
19 26 0.01 1.5 10.8 0.2 1 20 969 988 969 989 0.96
20 26 0.02 2.9 9.9 0.5 5 23 1010 1029 1005 1029 0.89
21 26 0.023 3.4 9.7 0.4 2 23 1036 1057 1035 1057 0.95
22 26 1.6e-05 0.0024 19.6 3.8 1 23 1061 1083 1061 1083 0.96
23 26 0.00031 0.046 15.6 4.3 1 23 1089 1111 1089 1111 0.97
24 26 0.00013 0.02 16.7 1.6 1 23 1117 1139 1117 1139 0.99
25 26 0.00043 0.064 15.1 4.9 1 23 1145 1168 1145 1168 0.97
26 26 0.18 27 6.9 0.2 2 20 1170 1188 1170 1192 0.93

Sequence Information

Coding Sequence
atggaaaaactaGTTGAAGATAATTCAAATCGTACGTGTAAAAGCGAAGAGGACGATGTCGATCAAATCCAAGACGAAATCATTGAGGTGGATTTGTACTCGTTGTGTCGAATATGCGGCAATATGCACGACACTTTGATCCCAATTTACGCGGATCAAGGCCTAGAGTTGGAGCTGAGTAcgaaaatcaattattatttaccaaTCGATGTTAGCGAAGAGGATATACTTCCGCTTAAGGTGTGTTCAAATTGTGCCACTACTGTTGCATTCTGGCACGAATTCATCGCCGAATGTTGTGAAGCTGAGAAACGCTTCAGCATAATGTTGCAGTCGAGTATGATAGATGATACTAAGGAGATGGCCCCTGAAAACTTGCAAGAGGAGCCCAACGAGATAGAGAATTCCGCTGACGAAAACCAAACGATGGATACTGAAACACAGGGATCTGAATATCTAGAAGAAACCGAATTTATGAATGATGAATGTATCCAAGAAAAACTGTCACTGGAGGAAAACATAGAGGAGCCATTACCAAATGAGCACGAATCGACACTGGAAGAAGAAGCAGAGGAGGTCAAACCGAATAAATCACCCATCACCATCATAACAAAATCACGATGCTCAAATATCATTTCAACCGTAGAAACTATCCCCAAAACATCGCACGCTCTAGACACAACAGACTCGGACACGCTCGTCGCGCTCGTTAAAAAATCTAATCGTTCCGGGAATATGCGACTCTCAAATGAAATTCTCGATGAAATCCGCCTGAATCTAAAACTAGAAGATGATGGTTTGTACAAGTGTTACGAGTGTAAATTCTATACGGACCAACAGGATGTGATGGAAGGTCATTTGAGGCAGCACTTTCAGAATACcctaaaaaaactaaaacagaCCATGAAGCTCAAAGCAAAATTTTTCGACGAGAATAAGATCGAAGTGAACGGAAAAACCTTATACGAATGTCCCGAGTGTAATAAGCGGTTGCACGCGACCAGCACATTTCTCTGGCATATGCGAATTCATACGGGAGAAAAACCATACGTCTGCTATATATGTGGGAAAAAGTTCCGTGTCTATCATGGAATATCGCGGCACATCAAAGAGACACACATGAAAACAAAAGACTTTGCATGTGATATATGTGGTCGGCTCTTTTCGAATCGGCGTAATGTCGCAGAACATCGTAATTTACATTCAAACGAACGGCCCTATACGTGTGATACGTGCGGCAAAGGATTTAAACAGCAGGCTTCATTGTTTATGCATAAACGACTACATACACCACATCAATATAAATGCGAGGTGTGTGGATTAGGATTTCGTATTAAAAGTTCGCTGCTGGTGCATGCCACAGTGCATACGGGTGTCAAAGAACATGAATGTGATATATGCCAAAAACGGTTTCGAATCAAGCACGAGCTAAATCTTCATAAGCTGGTGCACACGGATTTTAAGCCGTTTGCATGCGAAAAGTGTGGCCAGTCATTTAAACAGAAGCGATTTTTTGTCTCGCGTAATGCGACTACTGCTATTCAATACAAATGCAAATTTTGTCCGACAACTTTTACCGAAAAGCCTCTATTCAATGAACACACGAAACTCGCACATTCCGAGCTCATATTCCATTGTGACATGTGTAACGAACTGGTCGAACGTAATCTACTCATTTCTCATATGACTGAGCATGCGATGGAGGAAGTTCGATTGATAAATGAgcagattgaaaaaaaaaaaattttggcaaCGCCTGATCTCGAAACGTtacgaaataattttcaatttaagtgTGATACGTGCCCAAAAATGTTTGTCACAAAAACTGGGCTTCGGCTACACGTCaatcaaatacacaaaaagttGCGACGATATAAGTGTGCGGAATGTGGAAAATTATTCGGTTGTAATCGTATTCTACGGAATCATGTACTGAGCGTACATTCAAATGAGCGATCGTATAAATGCGACGTTTGTCCGAAATCGTTTAAAACGGATTCGTCGTATTATATTCACAAGCGAATTCACCATTTGGAAAATGCAAATTTTCCGTGTGACGTATGCGGCAAGTCGTTCAAGTGTCGtactaatttaaaaaagcaTAAATTAATTCATACCCAAGATCGAAAATATGCGTGCGATTTATGCTCGAAAACTTTTAAGACACAAAATTTGTTAGGATTGCACCGGAAATGTCATGTAACGAGTGAAGATTTTGTATGCGGGCTCTGCGAtcGCGATCACGACGAGGTCAATAACGAGGCTAGTTTAAATATCCCGGGAACCATAGCCTTTCAATCGAACACTAAGTGTTCATTTGATTGTGATATAATATTCAAGACATATCAGGAATTTCGGAAGCATAACCTTGAACACCATCTGAAGACGTGTATGCAGTGTGGCTTACACTTTGCTGACTTCGATATGATCCAATGCCACATAAAAACAGTTCATGTGTTCGAAAACGATTGGACCGAGATTTGTAAATTCTGTGGTATTCGAACCGGCAATTTGGAAGATCATATTCGACAACATAATTTGCATTGGCTGGACGATATCTATTGTGACAGTTGCGAGCTGCTTTTCGAGAATGAAATTGCACTCGAAGTTCATTTCGCGGTCATCAAACACGAATACCgatatcgttgttttgcatGTGACGACCGATTCATGGACCAGCATTCGTACCATAGTCATAAATCCAAACATACTACATCCAGAACAACGGAACTGGTAGTACCCAAGGCAAATCCTCAGATCCGAGCTATACTCAACGCGATGAAGAAACGTTATCGTGCTGATGGCTCATACCAGCCAGCGACATTCGAATGTCCTATGTGTGAGCAAAAATTTGGTCGTAAGTACAATATGGAAAAGCATATAGGTCTACATCGCCGTGACTATTTTTGCCGCGTATGTAGTCTCAGTTTTGTAACGGACAGTGCACTTCAAAAACATTTGGGCGGTTCGTGCAAGTCCCatctaaaaatgaaattcgaaaCTACGATAGTTTGCGCAAAAAATTCGTGCAATCAAACATTTCGATCACGCTACGAATTGTATCAGCACGAAAAGGTTGTCCatctacaaatccgcactgTGAAGTGTCCCGACTGCGACTTGGAATTTAAATCGACATCGATTATGGAGACGCATCGCAAGCTACATAATCAGGCATTCGTGTGCCcgatatgtaataaaaaatttacccaTCAGCATAAATTAAAGGCGCACGAAACTGTGCACACAGGCGACCGACCATTTGAATGCGACGTATGCCCGGAGAAATTTCGACACCACAGCAACCTGTATCAGCACAAGTTGAGCCATGCGAATATCCGGAAATACAAGTGCCTAAATTGTGATGCCGAATTTATGCGTTCGAATACATTTCGCGAGCATATGCGAACGCACGATGGTCAACGGCCGTATCAATGCGAAATTTGTCATAAGAAATATACGCAATTGTGCGTGCTCAAGCGACACATGGAATCGATGCATCGGCGGTGTGATATTTGTAAAATGGTGGTgggaaataaaatgaaacttcAGGTGCATATGTGGAAAATGCATCCGCTTTCGGATACGGATGGTGTGGCTAATACCGATTATTTGGCGGAAGAGGatgatgataaataa
Protein Sequence
MEKLVEDNSNRTCKSEEDDVDQIQDEIIEVDLYSLCRICGNMHDTLIPIYADQGLELELSTKINYYLPIDVSEEDILPLKVCSNCATTVAFWHEFIAECCEAEKRFSIMLQSSMIDDTKEMAPENLQEEPNEIENSADENQTMDTETQGSEYLEETEFMNDECIQEKLSLEENIEEPLPNEHESTLEEEAEEVKPNKSPITIITKSRCSNIISTVETIPKTSHALDTTDSDTLVALVKKSNRSGNMRLSNEILDEIRLNLKLEDDGLYKCYECKFYTDQQDVMEGHLRQHFQNTLKKLKQTMKLKAKFFDENKIEVNGKTLYECPECNKRLHATSTFLWHMRIHTGEKPYVCYICGKKFRVYHGISRHIKETHMKTKDFACDICGRLFSNRRNVAEHRNLHSNERPYTCDTCGKGFKQQASLFMHKRLHTPHQYKCEVCGLGFRIKSSLLVHATVHTGVKEHECDICQKRFRIKHELNLHKLVHTDFKPFACEKCGQSFKQKRFFVSRNATTAIQYKCKFCPTTFTEKPLFNEHTKLAHSELIFHCDMCNELVERNLLISHMTEHAMEEVRLINEQIEKKKILATPDLETLRNNFQFKCDTCPKMFVTKTGLRLHVNQIHKKLRRYKCAECGKLFGCNRILRNHVLSVHSNERSYKCDVCPKSFKTDSSYYIHKRIHHLENANFPCDVCGKSFKCRTNLKKHKLIHTQDRKYACDLCSKTFKTQNLLGLHRKCHVTSEDFVCGLCDRDHDEVNNEASLNIPGTIAFQSNTKCSFDCDIIFKTYQEFRKHNLEHHLKTCMQCGLHFADFDMIQCHIKTVHVFENDWTEICKFCGIRTGNLEDHIRQHNLHWLDDIYCDSCELLFENEIALEVHFAVIKHEYRYRCFACDDRFMDQHSYHSHKSKHTTSRTTELVVPKANPQIRAILNAMKKRYRADGSYQPATFECPMCEQKFGRKYNMEKHIGLHRRDYFCRVCSLSFVTDSALQKHLGGSCKSHLKMKFETTIVCAKNSCNQTFRSRYELYQHEKVVHLQIRTVKCPDCDLEFKSTSIMETHRKLHNQAFVCPICNKKFTHQHKLKAHETVHTGDRPFECDVCPEKFRHHSNLYQHKLSHANIRKYKCLNCDAEFMRSNTFREHMRTHDGQRPYQCEICHKKYTQLCVLKRHMESMHRRCDICKMVVGNKMKLQVHMWKMHPLSDTDGVANTDYLAEEDDDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01456668;
90% Identity
-
80% Identity
-