Tlat024136.1
Basic Information
- Insect
- Tipula lateralis
- Gene Symbol
- nfxl1
- Assembly
- GCA_963932295.1
- Location
- OZ010738.1:12562663-12565368[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.88 1.7e+04 -3.0 1.4 14 19 182 187 182 187 0.86 2 19 0.52 1e+04 -2.2 0.7 4 10 218 224 218 224 0.92 3 19 7.2e-08 0.0014 19.7 17.3 1 19 232 249 232 249 0.99 4 19 3.5e-05 0.69 11.1 11.2 1 19 285 304 285 304 0.96 5 19 0.64 1.3e+04 -2.5 1.8 5 10 328 333 328 333 0.94 6 19 6.4e-07 0.013 16.6 11.3 1 19 339 357 339 357 0.98 7 19 1.8 3.6e+04 -4.0 0.7 5 8 385 388 382 389 0.58 8 19 0.00076 15 6.8 10.4 3 18 394 409 392 410 0.92 9 19 0.68 1.3e+04 -2.6 0.4 1 5 419 423 419 428 0.73 10 19 0.77 1.5e+04 -2.8 1.8 5 10 433 438 433 438 0.95 11 19 0.025 4.8e+02 2.0 16.3 3 18 446 461 444 462 0.91 12 19 2.7e-08 0.00052 21.1 14.1 1 18 471 488 465 489 0.93 13 19 1.4 2.8e+04 -3.6 10.0 9 18 535 544 526 545 0.90 14 19 0.07 1.4e+03 0.5 5.8 4 12 559 567 557 567 0.89 15 19 4.3e-07 0.0084 17.2 7.4 1 12 638 649 638 649 0.97 16 19 0.3 5.8e+03 -1.5 2.1 15 19 662 666 661 666 0.83 17 19 0.0021 41 5.4 15.5 3 18 678 693 677 694 0.94 18 19 6.4e-05 1.3 10.2 13.7 1 17 748 766 748 768 0.86 19 19 0.85 1.7e+04 -2.9 1.3 5 10 797 802 797 802 0.92
Sequence Information
- Coding Sequence
- atgaataaacgcGATAAAACCAATAAGGTGCAGAGTCCCAATGCTTGGGGCAATGTACAAGCAACACCAACCCGTGCTAAACCtgtaaaaaatcaacaaaattcggaaataaaatcaaaccaggtcaaaaatcaagaaaaatttaaacaagtcCAAGCCAAGCATTTAGAAGCAGCTAGTAAACATATCAAAGATTATGAGTCGAGCTCCGATGAGGAGGAAATTACTACCGGTGATGATATACTAAAGTCTGTGTTCCAAAGCTATGCTGGTAATACCGCGGATCTATCGAAGACACAACAATTTCTAGAAAATTTATTCCAATCCGGTTCGGCGACGTGTTTAATTTGCATCGGAGGAGTTAAACGAGCAGACTCGATATGGTCGTGTGAAAAGTGTTACACATTTTTTCATCTGCAGTGTATTCAGCGATGGTCAAACGATAGTGTCTCCCTTAAACAAATGAATGTCTCCAGCTCGGACCATGGATACTACAATAATATGGGTGTTTTTGTGCCTAAAAAATCCAAACCTATTGTGTGGGATTGCCCAAAATGTCGAACTACATATACTCCGGATCAAATTCCTCGTCATTATATGTGTTTTTGTGGGAAAGAAGTAAGTCCAGTTAATCATCTTTGGAATATTCCACATTCGTGCGGAGAGTCATGTGGAAAACTACTAAAACCAGAATGTGGACACAAATGTGTGTTACTATGTCACCCAGGCCCTTGTCCGCCGTGTCCTCAAATAGTATCGGTTTCCTGCAAATGTGGAAATTCACCGCCTAGAACGGTTCGGTGTACTCAAAAGTTGTGGTCGTGTAACAAGAAGTGCAACCTTAAGTTGGGTTGTGGAATTCACGGTTGTGATTTAATTTGCCACGACAAAAACGAATGCCCACCGTGCAAGcgtaaaagtaaacaaaaatgtgtttgCGGTGCTAGTGTGGAAGAAAGGAACTGTTCTCAAACCGGATGGAAATGTAAAAAAGTTTGCAACAAAATGTTCCCGTGTGGCCTTCATAAATGTGAAAAGGTTTGTCACATCAATGATTGCGGTAACTGCCCGTATGGTGAGCCGAGATCTTGTCCATGCGGTAAACAATTTTCGGTTGCACCTTGTTCAGAGCAAGTGGAGTCATGCGGAGATACGTGTCAGAAGACTTTACCGTGCGAAGTTCATAAATGTACTCTACGATGTCACAAAAGCGAATGCAGTCCATGTGCAACAATTGTGGAGAAAAAATGTCGTTGCGGATTACATTCCAAAGAGTTACCTTGCTCGAAAACTTTCACATGCGAATCGAAATGCAAACAAATCAGAGAATGCAAAAAGCATCCATGTAATCGAAAGTGTTGTGATAATCAGTGCCCACCATGCGACAAAATATGCGGCAAAACATTATCATGCACCAAACACAAATGCCAGTCACTATGTCATAACGGCCCTTGCTATCCATGCAATCAGAAATCAATTATCAAGTGTCGATGTGGAACCACCACAAAAGAAGTACCATGCGGCCGCGAACGAAAAACAGCATCCCCGAAATGTATGATGCCGTGTAAAATTGCATCGAAATGCCATCATGAAAATCCGCATCGTTGTCACCAGAACGATTGCCCGACTTGTGTCCAAATTTGCAATCTATTCAATGATACCACGAGATGCGATCATCCATGCGAGAATCGTTGTCATGATGCCGTCAAAGTATTGATCACCGATAAGAATTTTAAGCCTGCCCTTCCATGGGAGGTGCAAGTTGAAACCTATGAAGTGCGTAAATTACCACATCCTGCTTGTCAGATAAAAGTAGCTGCTGTATGTTTAGGCGGACACGAAGAATGTTTATGGCCGTGCTGGAATTCAAAACCGACAAGTTGCCAACGGGAATGTGGTCGAAAACTGAAATGTGGAAATCACACGTGTCAACGATTGTGTCATGAAGTCGCCGACTTGAAATCGACAGAGCAGGAAGAATCCTGCCAACCGTGTACAGAAGGATGTAAAGTTGAACGTTCTGATGGCTGTATCCATCCATGTAAACGGGCGTGTCATCCTCCGCCGTGCGATCCCTGCAATATCAATATTAAAGCGCAATGCCATTGTGGTTTATCACCAGTATTCTACAAGTGCGGTCAACTTTTCCGATCGACTAAAGACGAGCAAGACCGAATACAGTTGGCTGaagaaaaagagaaaatgtATAGTTGTGGGAATCGATGCAATCGGAATTATCCGTGCGGCCACCAATGTCGTGCATCGTGCCACTCGGGAAAATGCCCAAATCCGGAACAGTGTAAGAAAAAAGTCAAGCTTTATTGTCAATGCAAAAACTTGAGACAGGAAGTAACGTGCGAAAAAATTCGcgtggaaaattttcaaatgcgATGCAACGAGACGTGCGCAGCCAAGAAACAAGAACTCAAAGAAGCGGCCAAACTAAAAGAGGCCGAACTCAAAAAACAAGAAGAGGAACGAAATAGGATTGAATTGGAAGAATTTGAGAAGAAGTACGCTAAAAAAAAGCCACGCGAACGCAAGACTGTAGTAGTCGAGGATCAGGAGGATAAAAATTTGGCCAAAATTGGCCTTATTGTTGCAGgtggtttagttttaatttcgtttgtgGTTTATCTAATGACTAAATAA
- Protein Sequence
- MNKRDKTNKVQSPNAWGNVQATPTRAKPVKNQQNSEIKSNQVKNQEKFKQVQAKHLEAASKHIKDYESSSDEEEITTGDDILKSVFQSYAGNTADLSKTQQFLENLFQSGSATCLICIGGVKRADSIWSCEKCYTFFHLQCIQRWSNDSVSLKQMNVSSSDHGYYNNMGVFVPKKSKPIVWDCPKCRTTYTPDQIPRHYMCFCGKEVSPVNHLWNIPHSCGESCGKLLKPECGHKCVLLCHPGPCPPCPQIVSVSCKCGNSPPRTVRCTQKLWSCNKKCNLKLGCGIHGCDLICHDKNECPPCKRKSKQKCVCGASVEERNCSQTGWKCKKVCNKMFPCGLHKCEKVCHINDCGNCPYGEPRSCPCGKQFSVAPCSEQVESCGDTCQKTLPCEVHKCTLRCHKSECSPCATIVEKKCRCGLHSKELPCSKTFTCESKCKQIRECKKHPCNRKCCDNQCPPCDKICGKTLSCTKHKCQSLCHNGPCYPCNQKSIIKCRCGTTTKEVPCGRERKTASPKCMMPCKIASKCHHENPHRCHQNDCPTCVQICNLFNDTTRCDHPCENRCHDAVKVLITDKNFKPALPWEVQVETYEVRKLPHPACQIKVAAVCLGGHEECLWPCWNSKPTSCQRECGRKLKCGNHTCQRLCHEVADLKSTEQEESCQPCTEGCKVERSDGCIHPCKRACHPPPCDPCNINIKAQCHCGLSPVFYKCGQLFRSTKDEQDRIQLAEEKEKMYSCGNRCNRNYPCGHQCRASCHSGKCPNPEQCKKKVKLYCQCKNLRQEVTCEKIRVENFQMRCNETCAAKKQELKEAAKLKEAELKKQEEERNRIELEEFEKKYAKKKPRERKTVVVEDQEDKNLAKIGLIVAGGLVLISFVVYLMTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01455351;
- 90% Identity
- -
- 80% Identity
- -