Tlat004259.1
Basic Information
- Insect
- Tipula lateralis
- Gene Symbol
- dmd-4
- Assembly
- GCA_963932295.1
- Location
- OZ010736.1:45643211-45654875[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-24 1.9e-20 73.5 13.1 1 47 73 119 73 119 0.98 2 2 4.1 3.2e+04 -4.0 1.5 3 8 357 362 353 364 0.64
Sequence Information
- Coding Sequence
- ATGATGCcgctaaacaatttaattaaatcgttcGACAACTCGTCCAACTGTTCGATAATCAGTGTTGGTGGCGGTGAACATAGTTCACCAAATAGTGTTATTAGTTgtagtagtaataatagtatAAATAGTGTTCGTAATAATGATAGTGGTagtggtaataataataataataatttaatgataaaaagtGAATCTCATAAATCGCTTAATCCGCGTATTCCAAAGTGTGCACGGTGTCGTAATCATGGCGTGATTTCTGGATTACGCGGCCATAAGAAACATTGCACATATAGAAATTGTCGATGTGCAAAATGTGAGCTGATACATGAACGACAAAGGATTATGGCGGCACAGgtgGCCCTTAAACGACAGCAGGCGGTCGAGGATGCCATAGCATTGAGATTGGCGTCGAATGAGACTGGTAAATCGATGGAGACGTTACCACCGGGCAAAATATTCGGTATGACTATAACCGAACCATGCACAACACCACCACCACCTCAATCGTCGAGTATGACACCGCCCCCACCTCCAACAATATCACCGCCACCATCAATTACATCATCGTCAGTGAATATATCGGCCAGCCAAACATCAATAATCACATCAACATCGGCCGATTCTATGAGCGAAGCAAACGAAAAATCAACCATAAGTTCATCTTCAACCGCGCATGTTAACTCAACGAACAAGAATGTGTCACAGAGCGCAATCGATATGCTGTCACAGCTGTTTCCCCATCGCAAACGATCAGTACTTGAATTGGTTTTGAAACGATGCGATTTAGATTTGTTGCGGGCGATCGAACAATGCAGTTCGGCACCAAGTGCATTTCGGCCTCCAGTCTCATCATCGCAGGTTACACAACAAATTTCGATTTCACAACTACCAATTCAGTCACCTATGTCGCATTCCCTGCAAATACCACAATCAATTGTGCCACCATCAACAACACAACCATCGCACTATACATCGTTAATTGCGTATCCAAAATGGTTACTTCCCATGTCATTTCcggtcacaatgggccatttgCCGAATATTGCGGCTCCACGTTGCACATTACCCAACTGCCCGATGTGTTTACATCCAATTTAA
- Protein Sequence
- MMPLNNLIKSFDNSSNCSIISVGGGEHSSPNSVISCSSNNSINSVRNNDSGSGNNNNNNLMIKSESHKSLNPRIPKCARCRNHGVISGLRGHKKHCTYRNCRCAKCELIHERQRIMAAQVALKRQQAVEDAIALRLASNETGKSMETLPPGKIFGMTITEPCTTPPPPQSSSMTPPPPPTISPPPSITSSSVNISASQTSIITSTSADSMSEANEKSTISSSSTAHVNSTNKNVSQSAIDMLSQLFPHRKRSVLELVLKRCDLDLLRAIEQCSSAPSAFRPPVSSSQVTQQISISQLPIQSPMSHSLQIPQSIVPPSTTQPSHYTSLIAYPKWLLPMSFPVTMGHLPNIAAPRCTLPNCPMCLHPI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01458414;
- 90% Identity
- iTF_01458414;
- 80% Identity
- -