Basic Information

Insect: Tipula lateralis
Gene Symbol: lolal
Assembly: GCA_963932295.1
Location: OZ010738.1:98840387-98844094[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.8e-17 3.2e-14 53.4 0.0 2 45 483 527 482 527 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.8e-17	3.2e-14	53.4	0.0	2	45	483	527	482	527	0.95

Sequence Information

Coding Sequence: atgtcagtacaacaattttgtttgcgTTGGAATAATCACCAACCCAATTTTATATCAGTCTTTTCAACACTTCTGCACAATGAAACGCTTGTTGATGTAACCCTTGCTGCAGAAGGTAGACAACTCCAAGCTCATAAAGTTGTGTTATCCGCGTGTAGTTCATATTTTCAAACACTTTTTACAACAAATCCATGTCAACATCCAATTGTTATATTAAAAGATGTAcaatatattcatttaaaaacTATGGTAGATTTTATGTATTATGGTGAAGTAAATGTATCACAGGAACAATTACcacatatattaaaaacagCTGAAATGCTTAAAATTAAAGGTTTAGCTGAAATGCCCGATGCAACTTCATTAACAAAATCCGAAAGTAAATCATCATCATCCGATCATATAGAACAAATCACTGGTGGCACCGTTGGTAATGAATCAATTTGGGGTAGTACAGAATCTCAGCAGTTTCATCACCAGCAACAAAGGCGTACACCGTCACCTGCCTCGTTATCACCGTCTACAAGACGAAAACGTCTACGAAAATCGTCAACAGGTTTTGGTACCTTATCAACAGAACGAACATCCGAAGAACAAAGTAGTATTGACGGtggatcaaatttaaatattggtcaAATGGATCCAATGACAACATTTGTACCCAGCTCTGGGAATATTTCATCAAATATAAACAGTACGAGAATATTAAAGGAAACCTCAAGTACAGAAACTGAACACCCACATCAAGAATCATCTCAGGAAAGCGTTGAAGAGTCAATGCATCATAGCTCGTCCGCAGTTATGaaaactgATGATGATATGGGGAATGTAACACACTCAATGCCAATAGATATAGCCGGGTCTACATCAAATACTGgtcaacaacaacagcagcaacagcaacaacaacagccaCCAGTTAGTTGTCCTCAGCCACAACCAGGTGTGCAATGGACATTAATTGATTCAAACTATCCAAGATTTTATCAGCCGGGTTTGGGAATGCAAACGCCGACTGGGCAAAATAATACGGATTCACATCAGAACAACAGTAataaccataataataataataatagcaatagtaataatacaaatacaaataataataatagtaataacaatcCTAATGCTGGAAATAGTACTCATCCTAATTCTACAAATGATGAAAACACCGGAGTTCAAACATTACAATATCAACAAAATCCAGCATATTCACCACAAATAATATCAGTGAATCcaaataatctaatgaatagCTATCAGTCCAGTTTATCAACCCCGACATCACCATCACAAGAAAATGATTCAATGGTACAGTCGGTATATAGTCAAGGACCAACACCGGCTCAATCACCAATCCAACAAATAGGAAATCAAGGCAGTAATAGTAGTGGTTCTCAAATGCCAGTAAAAAGAAAACGAAGTGTTAATCCACAaggtgatgaaaattttatacgTGCTCTTGAAGCAGTTCGTTATGGAGGGATTGGTTTTTGTAAAGCAGCAAGATTGTATGGTGTCAATAATCGTACACTTTGGTTAGAATATAAAAAACGTGGCTATCCGATCAGTCGTCCTAGTATTAAGAGTAGAATAAAATTAGAGCCAAATATGACTCCACCGCCACCTACAACaccaaataatgaagaaaatacaaTGGAAAATTATGATCAATTAACACCCACAGCTATAAATATGGCAACCGTGCCATCATCTACTGAACCAACTACACCATTAATGTGTCCTCCACATGCTCATCCAATGGGTGTGATGAGTTTCCTTGATACGCGCCATGTTGAATTTCCAACAGCAATACATCCAATGTCACGTCAAAGATAtgctgatccatcagtaaatgTAAATCCCACAGCAATGAATTTACaaggattaaattttaattccatgTAA
Protein Sequence: MSVQQFCLRWNNHQPNFISVFSTLLHNETLVDVTLAAEGRQLQAHKVVLSACSSYFQTLFTTNPCQHPIVILKDVQYIHLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPDATSLTKSESKSSSSDHIEQITGGTVGNESIWGSTESQQFHHQQQRRTPSPASLSPSTRRKRLRKSSTGFGTLSTERTSEEQSSIDGGSNLNIGQMDPMTTFVPSSGNISSNINSTRILKETSSTETEHPHQESSQESVEESMHHSSSAVMKTDDDMGNVTHSMPIDIAGSTSNTGQQQQQQQQQQQPPVSCPQPQPGVQWTLIDSNYPRFYQPGLGMQTPTGQNNTDSHQNNSNNHNNNNNSNSNNTNTNNNNSNNNPNAGNSTHPNSTNDENTGVQTLQYQQNPAYSPQIISVNPNNLMNSYQSSLSTPTSPSQENDSMVQSVYSQGPTPAQSPIQQIGNQGSNSSGSQMPVKRKRSVNPQGDENFIRALEAVRYGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKSRIKLEPNMTPPPPTTPNNEENTMENYDQLTPTAINMATVPSSTEPTTPLMCPPHAHPMGVMSFLDTRHVEFPTAIHPMSRQRYADPSVNVNPTAMNLQGLNFNSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01458525;
90% Identity: iTF_01054224;
80% Identity: iTF_01457497;