Thel118491.1
Basic Information
- Insect
- Tipula helvola
- Gene Symbol
- Rel_4
- Assembly
- GCA_963556165.1
- Location
- OY744483.1:289393774-289399241[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.5e-37 1.9e-32 115.4 0.0 1 168 18 202 18 203 0.90 2 2 0.18 4.2e+03 0.4 1.0 86 134 353 403 310 407 0.67
Sequence Information
- Coding Sequence
- ATGGCGAATATTGAAGACCTGCAAATATCACAACTCCAATTCACACCACAACTAGAACTAATTGAACAACCCCGTTCTGAATTTCGATTTCGCTATCAGACAGAAGTGCGTGCAGCATACGGTTGTTTGCACGGTATTAATTCACAACCGGATCAAAAAACTTATCCAGCTGTGCGGCTGTGTAATTTTGGGGGGCCCGCTTTAATACGTTGCACACTGGGAATTGTGGATTCCGTCAATAAATCAATGCATCCGCATAAGCTGATCattaaaaatcgtttaaaatttcaatctgATCCCCATTTCATTGATGTATCGGTCGATATCGGTTATGCGGCCATATTCAAAGGGTTGTGTATTATGAATACGACACGTAAAAATATGATCGATCAATTGAtcgagaaaaaaattacaatgcgTACGTTTGAGAAAGGTGAAGATGTGTCGGATCGTGAACGATTGGATATAAAACGTGAAActgaatttgaatataaaataattgatttgaatCGGGTGTGCTTATGTTTCGAGGCGTTTTGTAAGCGGGAGGATGCAGTTGGTTATGCTCGAATAGGTGATCCAGTTTTCTCTcagattataaataatttaaAAAGCAGTAATACCGGAGAATTACGTATATCCCGGTTATCGGCAACATCAAGCCAGGCACAGGGTGGTGAAACAGTATTTGTCTTAGTCGAGAAAGTTAGTTGTAAGAATATAAAACTTCGATTTTATGAAGTGGACGAATGGGACGATATTATTTGGGAGGCATGGGGACAATTTGAAAGCACCGATGTTCATCGTCAGTATGCCATAGTGTGTGAAACACCTCCGTATTACagccaaaatatacaaaattgtgttttggtttttataCAATTGTATAGGCCGAGTGATGATGCGGTTAAGGGAAACGGAATCTACGCTTATGAGGAACCACACCAGAACTATCATAGGCATTACATCTCCCTGTCAGACGATCAGgcaaaagaaaaattcatcaaacatCTGAAAGAAAGATTACACACAACATCTGTAAATGGGATCAAAATTCCGGAAAAATATCTCCAACTACTTCAAGAAATGTATGTAGAACATCTGCATAATTCCAAAATGCGGATACAGCAGAGGGTAGTAGAAGATATCCGCAATGAAGACAATAAATACCACATTATACAAGAACAACATCGAATAGCAGAAAATTCTGACAAATTTGAGCAGCATATTGGCATTGAACCACAAtgggattaa
- Protein Sequence
- MANIEDLQISQLQFTPQLELIEQPRSEFRFRYQTEVRAAYGCLHGINSQPDQKTYPAVRLCNFGGPALIRCTLGIVDSVNKSMHPHKLIIKNRLKFQSDPHFIDVSVDIGYAAIFKGLCIMNTTRKNMIDQLIEKKITMRTFEKGEDVSDRERLDIKRETEFEYKIIDLNRVCLCFEAFCKREDAVGYARIGDPVFSQIINNLKSSNTGELRISRLSATSSQAQGGETVFVLVEKVSCKNIKLRFYEVDEWDDIIWEAWGQFESTDVHRQYAIVCETPPYYSQNIQNCVLVFIQLYRPSDDAVKGNGIYAYEEPHQNYHRHYISLSDDQAKEKFIKHLKERLHTTSVNGIKIPEKYLQLLQEMYVEHLHNSKMRIQQRVVEDIRNEDNKYHIIQEQHRIAENSDKFEQHIGIEPQWD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01455439;
- 90% Identity
- -
- 80% Identity
- -