Tcon041513.1
Basic Information
- Insect
- Tipula confusa
- Gene Symbol
- Bgb
- Assembly
- GCA_963556175.1
- Location
- OY744477.1:178177059-178184243[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.2e-82 1.7e-77 260.1 1.2 1 164 31 190 31 193 0.97
Sequence Information
- Coding Sequence
- ATGATGAACGATCCAGCCGCATTAGCTGGCATGATACCATTCGATTCGATTGGACTATATGAACAGCCAAAACCAcggtttatatttaaaatgccGCGGGTTGTTCCTGATCAAAAATCGAAATTCGAAAGTGATgaactttttaaaaagttgagCCGAGAGAGTGAAatTCGTTACACTGGATACCGTGATCGTCCTCAGGAAGAGCGTCAAGTGCGCTTTCAAAATGGATGCCGTGAAGGCCACACCGAAATATCATTTATAACATCCGGaacaaatttacaattgatttttaatccaaatttgGGACCTTATGTTCCCGAAAAAGAATGTGACTTCGAAAAGGAATTTGGAAAGGTTTATATTCGATCACATTTTATAATGAACGGTGTGTGCGTTAAATTTCGGGGATGGATCGATTTGGATAGATTAGACGGTGTTGGCTGTTTGGAGTATGATGAACGTCGGGGTTTACATGAGGATGCAATATTAAAAGATCAAATTGATCGATATAATCAAAGGGTACGAgattttgaagataaacaaCGAATGTATCGTGATCGCCATGCTGAGATCGAACATATGCGGCGTACGCAAGCAAATGGGATGGGTGTGACGAATAGTGGCGCAAGTTCATTAAATTCGGGTGTTATGTGGAgacgttaa
- Protein Sequence
- MMNDPAALAGMIPFDSIGLYEQPKPRFIFKMPRVVPDQKSKFESDELFKKLSRESEIRYTGYRDRPQEERQVRFQNGCREGHTEISFITSGTNLQLIFNPNLGPYVPEKECDFEKEFGKVYIRSHFIMNGVCVKFRGWIDLDRLDGVGCLEYDERRGLHEDAILKDQIDRYNQRVRDFEDKQRMYRDRHAEIEHMRRTQANGMGVTNSGASSLNSGVMWRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01051687; iTF_01457099;
- 90% Identity
- iTF_01051687; iTF_01457099;
- 80% Identity
- -