Tfem003531.1
Basic Information
- Insect
- Tiphia femorata
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_944319705.1
- Location
- CALUEQ010000069.1:1906115-1910793[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-114 5.2e-110 367.6 39.2 1 300 29 327 29 327 0.97 2 2 0.0051 1e+02 2.2 3.8 122 172 327 377 325 380 0.92
Sequence Information
- Coding Sequence
- ATGGAATCTGCAATACCTGGACGCAGGAGGACTACTACTCGACATTCTGCAGAAGATCAGGCTCTTGACCAAATTGCAAAAGAGGCAGAAGCGAGATTGGCTGCGAAAAGACAAGCAAGAGTAGAAGCTAGAGAAATACGAATGAAGGAGTTAGAAAGACAACAGAAGGAAGCTGAGGAAAATGCTGACAGGGTTTATGATATGTGTACAGCTGATGCCAACAGAGCAATGAGGGTTACTCCGGATCCAATCAGGACATCACGCCTGCTCACGAATTCTAATAATTTTCAATCAAGTCGTAGATCTTCTGAGGATTCACTGGAAGATGCAGGATTAAATCGAGATCTTAGACTAGAATTAAAAGAGTTTGAAGAGAAATTTAGAAAAGCAATGATAGCAAATGCTCAATTAGATAATGAGAAGTCTTCTTATGCGTATCAAGTTGATTTATTAAAAGATAAGTTGGAAGAATTAGAAGAGACAACTGCCCAATTACGTAGAGAACTCAGAGAAAAAAATCGAGATGCAGACCAGCTAAAACGTATTGGTCAGAAATTGAAGGAGGATCTGGACTTTTGCAGAGCACAGTTGTTAGAAAGAGATACACTTATACAAGAAAATGGTTTAGTTATCATTGAGGACGAGCAGAGTGAGAATGAGGAAAGTGAACTTGAAAATAAAGTGTGTCATAGGAAGAGAGTCCTAATTAGTACGGAAGCTGCAGAAATGTTGCAAGAAGCAGGAAAGGGTTCATTAGATGTTCGACTGAGGAAATTTGCGTCCGAAAAAAAGGAGTTGCAAGATGAAATCCGTCACTTAAGATTGGAGCTTGAAGAGACCAAAAGCCGTTCGAAATCAGAAAGAGCAACAGGTTCACTTTTAGGTGGTTTAACAGATTCCGATGATATCCAACGTGAGGCAAACAAACTTTTAGCGGATCATAAATTCAAGTTACAGAAAGCAGAACAAGACATGTCTACATTGCAAGCCACAGTAGCTAGATTAGAAAGTCAAGTTATACGTTATAAGTCAGCAGCGGAAGCGTCTGAAAAAGCAGAAGATGAGTTAAAAGTTGAAAAAAGGAAACTACAAAGAGAAGTCAGAGAATCGCAAAGCAGAATAGAAGAATTAGAAACATCGAACTCTCATTTACAAAGGCGACTAGACAAACTTAAAAATGTAAAATCTACTCTTTTAAAATAG
- Protein Sequence
- MESAIPGRRRTTTRHSAEDQALDQIAKEAEARLAAKRQARVEAREIRMKELERQQKEAEENADRVYDMCTADANRAMRVTPDPIRTSRLLTNSNNFQSSRRSSEDSLEDAGLNRDLRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETTAQLRRELREKNRDADQLKRIGQKLKEDLDFCRAQLLERDTLIQENGLVIIEDEQSENEESELENKVCHRKRVLISTEAAEMLQEAGKGSLDVRLRKFASEKKELQDEIRHLRLELEETKSRSKSERATGSLLGGLTDSDDIQREANKLLADHKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQSRIEELETSNSHLQRRLDKLKNVKSTLLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- -
- 80% Identity
- -