Tfem004789.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tiphia femorata
Gene Symbol
PAXBP1
Assembly
GCA_944319705.1
Location
CALUEQ010000098.1:49066-63245[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5e-28 3.3e-24 86.1 1.3 2 272 541 750 540 752 0.92
2 2 0.055 3.6e+02 0.7 0.0 37 92 1193 1248 1171 1256 0.84

Sequence Information

Coding Sequence
ATGTCATTATTCAATAAACCGAAGCGGAATATACGTCGTCGGCCTTTCAATGACGAGGACGAGGACAATGAGAACAGGATGGAAGCCGAAGATACCCATTCTCTCAAATCGAAAGCAAAGAAGAAGGATAAACCGAAGCAAACGCTCCTTAGCTTTGGAGAGGAGCTCGAGGAAGCTGACGATGGGGAAGTATTTAAAGTCAAGAAATCTTCACGGAGCAAAAAATTGATGAAACAGCTTGATCACGAGAGGAGAAAAAAGAAAGGTGAAGAGAAAATGCAGGTGGACTCTGAGCAAGCAAACATGTCCATTAAACAGGAAAAAGATTTAGAAATAAAGACAGATGATCTAGTAGTGAAAATAAAGAACACCGGCCCTTTAATTTTAAATGGACGAGCTGCGTTAGTAGCGGGAAAAGACGATTATACATCCGATGATGAAGACGATGAGCCCCACAGTCATAAATTTCGCAAAAATACAGATAAGGCAGATACTATGAAAATACTTCTTGAAAGTGGATGCATACCGGATGCTGCTATGATCCATGCAGCTAGGAAACGTAGACAAAAAGCAAGAGAATTAGGTACTGATTATATACCTATTGAAGAACCAAGCGACGACAAAGGAAAGTCACGTCTAATCAGAGAGGAAGATCATGACAGAAGTGATGATGATGATTCTCAAGATCGTATCGATATGACTGTAAATACAGAAGCACGGGATAAGGAAAAGAGAAGAGAAGCATTCCTTGCTTCTCAAGTTTCCAATAAACTTTCGGATGATGAAAGTGAACACGATAATGAAGAAGAAGAATGGGAAGCACAACAGATTAGGAAAGGTGTTACAGGCGCACAGATTGCAGCGGCTCAACAAGACTCCATGATGCACCAGCAATACTCAATGGGTATTAACGTAAATCAAATGATAGGAACAGGTGTACCTATAGAAATGGTAATGATGCCAGCTCCACCTCCACCACCAACAATTCAACCACCCGATCCTACAAAAATAATACCAGTTAGTCCACAAGAAATAGTGAATAAAATGCGTGTTAGATTAGAAAGGTTGAGAGAAGTGCATCGCAGACATCAGTTAGATCAAGATAACTTAGAACACGAGCTAGGACAGACTTTGAAAGAACTGGACGAAGGCGAAGTTCGCGCTCCCCAGCTTGCACAGCGCTTCAGATATTACCAAGAGTTGCGTGGGTATGTCACTGACTTGGTAGAGTGTCTTGATGAGAAGCTGCCTCTGGTTACTGGATTGGAACATCGCTGGTTAGATCTATACAGTGAACGTTCCACTGAACTGATGGAAAGAAGACGGCAAGACACCAGAGATCAAGCTGAGGAAATTACAACAGCAGCAAGGGGTCAGCCAGTAAGAAGAGGTCCAGAAATAGAAGCACGTATTCGTCGTGCAACAGAAAGAGAAGGTAGACGAGCTCGTCGAAGGAGAGCACGAGAGCTAGCTTCTACTTTGCCAAAGCATATAGATGGCATGTCTAGTGACGATGAAGTCACGGAACAACAAAATCTTGCGTTTAAACAGGCAAAAGAGGAAATAGATAATGATTGCAGTGAAATATTCTCTGACGTTGTGGATGATTACTGTACGGTGAGGGGAATTCTTTCAAAACTTGAATCATGGCGTGAAACAGACATGGATGCTTATATGGAAGCTTATGTATCGTTGTGCATACCTAAAATTATTTCACCAATTGTTAGGTTGCAATTGGTTACTTGGAATCCAATTATGGAGAGTGTTGATATAGAGCGAACAAAATGGTATAATGCATTGCTTTTATATGCTCTGTGTACTACAGAAAGTGAAGAATCACTCAAGCATGATCCAGATGTCAGATTAGTTCCATTTACAGTCGAAAAGATTGTTATACCTAAATTAACATCTATTGTTGAAAAAATTTGGGATCCAATGTCTACATCTCAAACATTACGTCTTGTGGGCACTGTTAACCGCCTTATTAGAGATTATCCAAATTTAAATGATACGAGTAAGCCCTTAGAATCGTTGTTTAATGCAATTCTGGACAAAATTAAAGCTGCCGTCGAAAATGATGTCTTCATACCAATATTTCCAAAGCAGGTACTAGACACGAAACATCAATTTTTTCAAAGGCAATTTGCTATGGCAGTAAAATTATTGCGTAATTTATTAACTTGGCAAGGCTTAGTTGGGGATACTCAATTAAAAAACTTGGCACTGGGTTCGCTATTAAATCGGTATCTTTTGGCTGGATTGAGAGTGTCTTCTGCAGTTGACGCCCTTTTTAAAGCAAATATGATTATGAGCACTCTTCCTCGTGCTTGGCTTCAAGGTGAAACAATTGAACATCTAAAAATGTTTGCTACTCTCATTCAGCAACTAAGTGATCAGTTAGATCAAGCAAATCCAGCGCATAATGAATATGTTACGCATAGTTTATTTAGATGTGGAAAAGAGTATACTTATATGTATAACGTCACATCAAGCTCTGGTGTGCTGCTGCCATCCACTGCAGCCTCTTCTTGGGGTTTACATGGTAAACTTGTAATTCGAGCAGAAGAAAATTCAACTATAATGCAGTTGCAATCCCTACAAACTACCATACGGAACGGTAAGCTTGAAGAACAAGGAAAATATGCACATATTAATGATAATACCAATGATCTTTTAAAGCCTTTTGAAGTTACATACAAACATGGACTTCTACAAAATTTTAGTGTGCAGTCTGAATCTGTTTGGGCCACAAACATAAAGCGAAGTATAGCTGGTGTTTTGCAATTAGATTTAGACGGTATTACCAAGCATGTTGCATTTCATTCTACAGAGGTAAATCATTATGGTCAATGTAATATTGAGTATTTGATAAGCCATAATGCTGCTAACGAGTCACTTATTAGAAAAGCTTTTGACCCACGGAATTGCATTGGAGATACAGAGCGAAGTTGGACCAATGTTCCTAAAATGCTATGCCTTAATTACGATCAAAATCGGATTATAAAATCCAGTGAAAGACAATACAAAATAAATTTTAAATCTCCTAACGAGCGAACGGTAGAAAAGATTTTGTTCATCAATGCAACAGGTGGAATATATGTTCAACCATTTCAAAGTTATGGAGAGGTACAATTTCACTTTATCAGGCAAGTTTTTGAGCTGGTTTCAATAACGGAGGAACTAACAATCAATCCTACTGATGATATATACACTGTTGGCATTCAACACGAATTGCCACAAAGTGATCTTACACAGGGTAGAGGGAAGCCTAGCAAACACACAATTTTTAAGTTTATAGGAAATTTACTGGATCGCTTAAGCCATAGACTTAAAAATCCTGGATTGGATACTAATACTAGTAATTTACATAATACAACTATCTCTGTATTATTATATTATTTGGGTATGCTGAATCACACAGATCTGAGAGTTGCTTATAGTAAAATTTCTGGAACTAGTTACAAAGATGAAACAATGCGGAATATATTTTTGGAAACTCTTCCGCAAATTGGAAGTAAAGAGGCTGCTTTATTTATACTCGAACTTATTCAAGAAAAAAAAGTATCAGATATAACATCTGTGCAACTTCTTACACAATTACCATTTCACATTCAGAAGCCAGACGTGCAGTTATTAATCAGTTTACAATCTCTTTTAAGTTTATCAAATGGTATTTCTTCAGAAGTGCAAAATACAGCAATTCTTGCATACGGCACCTTAATATATAAAACATGTCTCTCCTCTTGTCCATATGAAATGTTAGATGATTACGTACGTTTATACCTTGATAAATATACAGAAAGTTCGCAATATGAACAAAAGATGGTATGGCTAGAAGGATTAGCAAATATACAACTGGGCAGAGTAGTAGAATTTTTAGAACCAATTGCTAGTGGTAATAATGCAGAATCACAGAATTTTCGAGTGCTTGCCGCTTGGGCCTCACTGCCAACTGCACCAATGCGACCTGACGTGATATATCCTGTGTACTGGCCAATTTTAATAAATAGGACGGAATCCCTAGAAATGAGAATCGCTGCACTTACTTTACTTATTGTATCGAATCCAACACCTAGTCGTTTGATATCGTTATATTGGCACATACAAACTGAACCCTGTCCACATCTCTATAATTATTTTTACACAACATTGAAGTCCATGGAGGGGACTACACATCCCTGCTACATGCATATTGGTGGACTAGCTGCACAGTTCATGCGTATAATTCGCCAACCATCTACTAATGGCCGATTGCTCACTGGCAACTATATGTTTGACTATCATGATACAAAGAGAAAATTTGGCGCTATGTTTCATAGTGTTATAATAGCTAATACGCTTACTAACATTCCCGAAGTAATGCATATAACTTTAAACAATTATGGAAATGGAGTGAACATAAATCATATATCCTTATACATAAAAGGAGAAGGTCTTTTACATGGCTTCTCGAGTCACTTTAACAATCCAATACAAATTCGATCTATATTAGAACAATATAGACTGGATCAGAGAAAAAGTGTACCAATCCATTTAGAAATAATTTTACGGATTCATCAGAAGACAATTCTATGTATTCATTTGAATGAAACAAGTATATCAAAAGCTTTTCAATATCTGTCTTCATTACCAGAGAACTTTTATCATATATATGAAAAGATGGAATTTCATGTCAATCAACAGCGGATTAATATTCCGTTAACTATGGAATCAATACAAGTAACTGACCTTGGATCAAATGTAAGAATAGCACAAAGAACTACTTCAATGTTTTCAATAAGAGGAAACTTTACACATACATTAGAGGGGCGTAATAACCATGTTATACTGCGCACATCTGTTCATGGTTCTCAAATCGTTGAGGATTACAATCCATTGATGGATCTGTGGCAGGGGGCTGAACGTGCTCAGTCTATTCATGGATATCTGCCCATTAATATTACAATTGGTATCGAAGATCATCCGTTTATATCGTACAACACTCCAGGAGAATATATGAAAACAGGACTCACAGCTCACGTAAAAACAGTTACGAATATTAGAGGAGTGCAAGTTACATCAAAATTGAAACAAATATGTTCTGAGTGCCCAATAGAATATATAGTGACTAATTCACCTGCTTCTGATATCATGACTAGTACCTTATTGGAGGCAGAGTTTCCAGAATTCGGAGGACGTGCATTTCTAAATTTGTTCGATTGTGAAAATAAAATATCACAGGGCGATATAATTAGTAATATTTTGGCTTCACATCGTGCTAATTATCAGATTTTCCCAGTTATGCAGTATGCTCTACTAGGGGTTCATTTACTGGACTATTTATGGTATGTACCTCCAAAAGGCAGCTGTGGTATAGCTGCATATACAGAACCACTCAACATATCTCGTTCTCAGATAAAGTTGCATTATGTAAAAAGTGGAAAGAATCATATGATATCCCTTACAAATCATGCATTAGAATCTTCTCACCCTCGTATACTTCATCAGTGGAATTTGGCTGTAATTTACGAAACTACAAGTTGGATTTCGGATAGTCTGAAAGTCAAAATTACTAAAATTGCACCTGGCAAAAAAGTGTTCAAGTTTTGTTTAGAAGCTGAAAAAGATATGCCATGGGACTGGGACTTCTTAAGCATTCAACCAAGCGATCCTGCGCAAATTAAATTAAACATCGCTTGGGGATTTGCTGAAATGGCAAAAGGAAAATGCAAAGGATCACATTTGCAAATAAATTTACTCGGGGAGATCAGCAAGGAACAGATTGATAATCAGCAAAAGACAGAATGGCCTTATGCAGCATGTCACAAAGAATCGGAAGGGAAAACGTTTATTCCATATACTGATTCTTGTTATGAAGCTTCCAGAGAGCTGTCTACTTTTCGAAAATATCAAGCTTCCTTTCAATATGAAAATATTCCACATGTTTTAACAAAATTTGCTTGGAAATTAAGAGCATTTTACGATTTAATTGGTGGAAATAGTAGTGACAGTGTACACTCTGATAGATTTACAGTAACTGCTACATTTCCCAAAGGCTCAAATAGTGGTGAGCTACAGTTAAACAGTGATAAAGTATCTATAATATACGATTACAGTGTGATTGATTTCTTTCTGACACGCACAAGGATCCATAAGTATACAGATTTACCATTATTTGGTCAATTCTTTAGTACTTGTATAATAGCATCGGATTTCATAAGTTCTGGACATAATGTATCATTTCCACATGAAAAATCTCAAGAAATACTGTTGCTTGGTCAATGTTACGATGCTAATCCAAGATTTGCACTGACTTCTAAAAATTCAGTGGATGGTATTATAGTTAATGTAACTGATGAACTGGGTACAGTGTCGATAATGCCTCATAATGAAGGAGGGGCAGTGTATAACTCAACATTATATATGCAGTTGGAAAAGAATTTTATATTCCATACTTTAGGTTCAAAGAGGATACGATTGGATGATCGATCAGTTGATGTTTTATTACCTTCTATATTTTTATTCATGCATTGGACACCAGAACAAGTTTTAGTATATTTTCCAAATTACATAATGGAATTTAGCTGCGGAATGTGTACAATTCCTAACACAAATATTAACAATTTATATCAGAAACTTATTGAAGATTGA
Protein Sequence
MSLFNKPKRNIRRRPFNDEDEDNENRMEAEDTHSLKSKAKKKDKPKQTLLSFGEELEEADDGEVFKVKKSSRSKKLMKQLDHERRKKKGEEKMQVDSEQANMSIKQEKDLEIKTDDLVVKIKNTGPLILNGRAALVAGKDDYTSDDEDDEPHSHKFRKNTDKADTMKILLESGCIPDAAMIHAARKRRQKARELGTDYIPIEEPSDDKGKSRLIREEDHDRSDDDDSQDRIDMTVNTEARDKEKRREAFLASQVSNKLSDDESEHDNEEEEWEAQQIRKGVTGAQIAAAQQDSMMHQQYSMGINVNQMIGTGVPIEMVMMPAPPPPPTIQPPDPTKIIPVSPQEIVNKMRVRLERLREVHRRHQLDQDNLEHELGQTLKELDEGEVRAPQLAQRFRYYQELRGYVTDLVECLDEKLPLVTGLEHRWLDLYSERSTELMERRRQDTRDQAEEITTAARGQPVRRGPEIEARIRRATEREGRRARRRRARELASTLPKHIDGMSSDDEVTEQQNLAFKQAKEEIDNDCSEIFSDVVDDYCTVRGILSKLESWRETDMDAYMEAYVSLCIPKIISPIVRLQLVTWNPIMESVDIERTKWYNALLLYALCTTESEESLKHDPDVRLVPFTVEKIVIPKLTSIVEKIWDPMSTSQTLRLVGTVNRLIRDYPNLNDTSKPLESLFNAILDKIKAAVENDVFIPIFPKQVLDTKHQFFQRQFAMAVKLLRNLLTWQGLVGDTQLKNLALGSLLNRYLLAGLRVSSAVDALFKANMIMSTLPRAWLQGETIEHLKMFATLIQQLSDQLDQANPAHNEYVTHSLFRCGKEYTYMYNVTSSSGVLLPSTAASSWGLHGKLVIRAEENSTIMQLQSLQTTIRNGKLEEQGKYAHINDNTNDLLKPFEVTYKHGLLQNFSVQSESVWATNIKRSIAGVLQLDLDGITKHVAFHSTEVNHYGQCNIEYLISHNAANESLIRKAFDPRNCIGDTERSWTNVPKMLCLNYDQNRIIKSSERQYKINFKSPNERTVEKILFINATGGIYVQPFQSYGEVQFHFIRQVFELVSITEELTINPTDDIYTVGIQHELPQSDLTQGRGKPSKHTIFKFIGNLLDRLSHRLKNPGLDTNTSNLHNTTISVLLYYLGMLNHTDLRVAYSKISGTSYKDETMRNIFLETLPQIGSKEAALFILELIQEKKVSDITSVQLLTQLPFHIQKPDVQLLISLQSLLSLSNGISSEVQNTAILAYGTLIYKTCLSSCPYEMLDDYVRLYLDKYTESSQYEQKMVWLEGLANIQLGRVVEFLEPIASGNNAESQNFRVLAAWASLPTAPMRPDVIYPVYWPILINRTESLEMRIAALTLLIVSNPTPSRLISLYWHIQTEPCPHLYNYFYTTLKSMEGTTHPCYMHIGGLAAQFMRIIRQPSTNGRLLTGNYMFDYHDTKRKFGAMFHSVIIANTLTNIPEVMHITLNNYGNGVNINHISLYIKGEGLLHGFSSHFNNPIQIRSILEQYRLDQRKSVPIHLEIILRIHQKTILCIHLNETSISKAFQYLSSLPENFYHIYEKMEFHVNQQRINIPLTMESIQVTDLGSNVRIAQRTTSMFSIRGNFTHTLEGRNNHVILRTSVHGSQIVEDYNPLMDLWQGAERAQSIHGYLPINITIGIEDHPFISYNTPGEYMKTGLTAHVKTVTNIRGVQVTSKLKQICSECPIEYIVTNSPASDIMTSTLLEAEFPEFGGRAFLNLFDCENKISQGDIISNILASHRANYQIFPVMQYALLGVHLLDYLWYVPPKGSCGIAAYTEPLNISRSQIKLHYVKSGKNHMISLTNHALESSHPRILHQWNLAVIYETTSWISDSLKVKITKIAPGKKVFKFCLEAEKDMPWDWDFLSIQPSDPAQIKLNIAWGFAEMAKGKCKGSHLQINLLGEISKEQIDNQQKTEWPYAACHKESEGKTFIPYTDSCYEASRELSTFRKYQASFQYENIPHVLTKFAWKLRAFYDLIGGNSSDSVHSDRFTVTATFPKGSNSGELQLNSDKVSIIYDYSVIDFFLTRTRIHKYTDLPLFGQFFSTCIIASDFISSGHNVSFPHEKSQEILLLGQCYDANPRFALTSKNSVDGIIVNVTDELGTVSIMPHNEGGAVYNSTLYMQLEKNFIFHTLGSKRIRLDDRSVDVLLPSIFLFMHWTPEQVLVYFPNYIMEFSCGMCTIPNTNINNLYQKLIED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-