Tbis001848.1
Basic Information
- Insect
- Tineola bisselliella
- Gene Symbol
- stc
- Assembly
- GCA_028551675.1
- Location
- JAPWLS010001339.1:191770-201499[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.9 1.7e+04 -4.0 1.6 15 19 294 298 293 298 0.81 2 13 0.13 1.1e+03 -0.3 2.5 2 10 326 334 326 334 0.91 3 13 0.0004 3.6 7.7 19.7 3 19 341 357 340 357 0.94 4 13 7.5e-07 0.0067 16.4 11.0 1 18 393 410 393 411 0.91 5 13 0.00062 5.5 7.1 15.7 1 19 452 470 452 470 0.98 6 13 2.6e-06 0.023 14.7 13.3 1 19 511 533 511 533 0.90 7 13 2 1.8e+04 -5.0 2.2 6 10 563 567 563 567 0.94 8 13 0.093 8.3e+02 0.1 5.8 1 11 573 583 573 584 0.87 9 13 2 1.8e+04 -4.4 1.8 4 10 588 594 587 594 0.77 10 13 2.2e-08 0.0002 21.3 10.7 1 18 600 617 600 618 0.97 11 13 0.00063 5.6 7.1 13.7 1 18 657 673 657 674 0.95 12 13 3.7e-07 0.0033 17.4 15.3 1 18 710 729 710 734 0.85 13 13 0.00027 2.4 8.3 15.6 1 19 740 760 740 760 0.91
Sequence Information
- Coding Sequence
- ATGTCGCATTGGAACGGGAGCAACTCATACAATTCAAGACAATACCGTGAATCTGAGAATTGGAATAACGATCAGGGTAATCAACATCCCAGCCAAAGTAATTACTCAAACCAACATAGACAAAATAACCATTATGTGTCATTTAATCAATTTATTGCACATATGCAAACAGACGAAGGTCCCAGCAGTAACAGTTATGATCAGAGTCAGACTTATGGCGCCAATTCTGCGCCCTCAACATCCCAGGAAGTAGGTAGCTATGGAAATGTAGATAACTCTGCTGGCACATCACAATCATACAATGTTTCTAATTCTAAATTAACACCGACGGCAACAGAATTTGTGCCTAAAAATGCACACGCTCAATATACTCCAGCAGTAGGAGCATCTGCAGTAAACGCGTTTGAGACTGATCACCGAAGTAGCTCAAGAAACCGCCGTCCTAATAATAGAGAAGAAAAGAAGTTTGATAGACATCGTAAACCAAATAAAAATCGGGACTCGGATGCACGGAAGACATTCTATAACAGTAATTCGAGTCAGGATATAAGGAATAATGCCAATCGTAATAAAAATTGGTTTAGCACTCAACGGGGGAGGACTGAATGGAATCAACCAGATGATGAGAATTCCGTTAACAACTATCACCAATATAAACCTAAACAAAGTCCTAAGTATAAGCCGGTGTCTAATCAAGAACTAACTCAAAGGGAAAGATTAAGTGAACAGCTTGATCGTGGGACCTTGGAATGTCTTGTGTGCTGTGAGCTTTTGAAGCAGATGGAGTCAGTGTGGTCATGCTCAAATTGTTATAACATTCAGCATTTGAAGTGTATCAAAAAATGGGCCGTCAGCAGTATTGTGGAAGGAAAATGGCGTTGTCCAGCATGCCAGAACACAAACATTGATATCCCAATGGAATACCGTTGCATGTGTGGGGCTGTTCGCAATCCTGACTTCTTGCGAGGGTCTGCTGGTGCTCATACTTGTGGCCAACAGTGCTCCCGAGTAAGAAGCTGTAAGCATCCGTGTCCTTTGCAATGCCATCCTGGGCCGTGTCCACCATGCCAGGCTACTGTTAGGAAAGCGTGCAATTGTGGTGCAGAACACCGTATAATAACATGCAGTAATAAACAACCGCAAATATGCACAAGGACTTGTAATAAGAAACTTAACTGCAATGTGCATCGGTGCCTACAAACTTGTCATGAAGGGCCGTGCGCTGAATGTGATCAATTCGTTACACAAGTGTGTTATTGTCCTGGTGGTAATACGCATCAAGTAAAATGCGCGTCAGACACCTCATCTTCATTGAACTGGTCATGTGGATCGGAGTGTGGCCGAGTGCTGTCATGCGGGGCTCATGTGTGCAGACAACAGTGTCACCCCCCACCTTGTGCTCCATGCCAACTGTTGCCCAGTCTGGTGGCACTGTGTCCCTGTGGGCAGACTCAAATAAAAGATGGTCAACGTAAATCTTGTACAGATCCGATACCGCTGTGTGGTAAATTGTGCACTAAACGTCTCGAATGTGGACCTAATGGTGATAATCATTTCTGCAAAGTGGAATGTCATGAGGGTCCATGTCCGACATGCCCCGATAAGACAACACTGCCGTGCCAATGCGGTCATACAGTTCGCGAAATACTATGTGCTAATTTGCCACAGGAAATTAACAATATTTTCTGTCAGAAGAAGTGTAATAAGAAATTGTCGTGTGACCGCCACCGTTGCCGTGCACTTTGTTGCACAGACAGCACGCACAGATGCAGATTGCAATGTGGACGCACTCTACACTGTGGCACGCATAGATGTGAAAGGACCTGTCATACTGGATATTGCGGGATTTGTATGTATACAAGTTTTGAGGAGTTGACATGTGAGTGTGGTGCTGAGATAATATATCCACCGATCCATTGTGGCACCAGACCACCTTTGTGCAATAATGAGTGCGTCCGTGAGCGTCCCTGTGGTCATACTCCCCTTCACTCCTGCCACAGCGGAGAATGCCCACCCTGCGTCGTACTGACCAGCAAGAAATGCCATGGACAACATGAGGAAAGAAAAGCAATACCATGTTCGCTGGAAGGATTTTCATGCGGGTTGCCGTGCGGTAAGCCGCTTCCATGTGGCAAACACCAATGCATCAAGACATGTCATAAAGGACCATGCGATTCTGAGGTATGCAAACAGCCGTGTACTGTCGAGCGTGAATGGTGCAGCCACCCGTGCGGCGCCCCTTGCCACAACGGCCCCTGCCCCACCAACACGCCATGCCGCCGACCCGTGACCGCCACCTGTCCATGCCGCAGACGAACACTGCAGCGACCGTGCGCTGAAAACCAACGAGAGCTTAACAAAATAATGAGCGCACTGGCTGCCACGAAGATACAGGAAGGAGAATCGGTGGACTTGGCTGACATGACACGGGCGGGGAGTAATCTTAAAACTCTCGAATGCGACGATGAATGCCGCGTCGAAGCTCGCACACGACAGATGGCGCTGGCGTTGCAGATTAAGAACCCCGACATATCGTCCAAATTGGCGCCACGCTACAGCGAACATGTGCGACAATGGGCTACGAGAGACCAAGTATTCGCACAAAATATACATGATAAACTGACCGATTTGGTCCATCTTGCTAAGAAGTCAAAACAAAAGACGCGCTCTCATTCCTTCCCGTCAATGAACAGACAGAAGCGTCAATTCATCCACGAGATGTGTGAGCATTTTGGTTGTGAATCCGTCGCCTATGATGCTGAGCCTAATAGGAATGTTGTGGCGACGGCCGACAAGGAAAAGTCGTGGTTACCAGCAATGAGCGTGCTGGAAGTGCTGAGCCGTGAAGCTGGCAAGCGTCGTGTTCCAGGCCCAATGTTACGCAATGATGTGCAGCAATCGCAGCCAACTTCACTCCCGCAGACATCTAGTGCTGCCAAATCAACCAGTGGATGGGCGACTTTAACGCCAACGAACGCGTGGGCGACCCGCAGTAAACAGCAGGCAGAGCCAGAGACAAAGCCGCCAGTCATAGACTACTTTGATTATCCACCCGATAATTAA
- Protein Sequence
- MSHWNGSNSYNSRQYRESENWNNDQGNQHPSQSNYSNQHRQNNHYVSFNQFIAHMQTDEGPSSNSYDQSQTYGANSAPSTSQEVGSYGNVDNSAGTSQSYNVSNSKLTPTATEFVPKNAHAQYTPAVGASAVNAFETDHRSSSRNRRPNNREEKKFDRHRKPNKNRDSDARKTFYNSNSSQDIRNNANRNKNWFSTQRGRTEWNQPDDENSVNNYHQYKPKQSPKYKPVSNQELTQRERLSEQLDRGTLECLVCCELLKQMESVWSCSNCYNIQHLKCIKKWAVSSIVEGKWRCPACQNTNIDIPMEYRCMCGAVRNPDFLRGSAGAHTCGQQCSRVRSCKHPCPLQCHPGPCPPCQATVRKACNCGAEHRIITCSNKQPQICTRTCNKKLNCNVHRCLQTCHEGPCAECDQFVTQVCYCPGGNTHQVKCASDTSSSLNWSCGSECGRVLSCGAHVCRQQCHPPPCAPCQLLPSLVALCPCGQTQIKDGQRKSCTDPIPLCGKLCTKRLECGPNGDNHFCKVECHEGPCPTCPDKTTLPCQCGHTVREILCANLPQEINNIFCQKKCNKKLSCDRHRCRALCCTDSTHRCRLQCGRTLHCGTHRCERTCHTGYCGICMYTSFEELTCECGAEIIYPPIHCGTRPPLCNNECVRERPCGHTPLHSCHSGECPPCVVLTSKKCHGQHEERKAIPCSLEGFSCGLPCGKPLPCGKHQCIKTCHKGPCDSEVCKQPCTVEREWCSHPCGAPCHNGPCPTNTPCRRPVTATCPCRRRTLQRPCAENQRELNKIMSALAATKIQEGESVDLADMTRAGSNLKTLECDDECRVEARTRQMALALQIKNPDISSKLAPRYSEHVRQWATRDQVFAQNIHDKLTDLVHLAKKSKQKTRSHSFPSMNRQKRQFIHEMCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLSREAGKRRVPGPMLRNDVQQSQPTSLPQTSSAAKSTSGWATLTPTNAWATRSKQQAEPETKPPVIDYFDYPPDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01452020;
- 90% Identity
- -
- 80% Identity
- -