Tpel008714.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tinea pellionella
Gene Symbol
stc
Assembly
GCA_948150575.1
Location
OX411255.1:1730713-1741542[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 1.9 1.7e+04 -4.0 1.6 15 19 295 299 294 299 0.81
2 14 0.0075 67 3.6 1.4 2 10 327 335 327 335 0.95
3 14 1.7e-05 0.15 12.1 14.7 3 19 342 358 341 358 0.94
4 14 0.95 8.4e+03 -3.1 1.5 5 10 383 388 383 388 0.94
5 14 0.00034 3.1 7.9 17.0 1 18 394 411 394 412 0.90
6 14 8.8e-05 0.78 9.8 12.7 1 19 453 471 453 471 0.98
7 14 2e-06 0.018 15.0 13.0 1 19 512 534 512 534 0.90
8 14 2 1.8e+04 -5.0 2.2 6 10 564 568 564 568 0.94
9 14 0.16 1.4e+03 -0.6 11.3 1 11 574 584 574 585 0.93
10 14 2 1.8e+04 -4.4 1.8 4 10 589 595 588 595 0.77
11 14 8.5e-08 0.00076 19.4 17.8 1 19 601 619 601 619 0.99
12 14 0.031 2.8e+02 1.7 17.2 1 18 658 674 658 675 0.81
13 14 1.9e-07 0.0017 18.4 13.6 1 18 711 730 711 735 0.85
14 14 0.97 8.6e+03 -3.1 17.4 3 18 742 763 741 764 0.83

Sequence Information

Coding Sequence
ATGTCGCAGTGGAACCGAGATTCTGAGAATTGGGGTAACAGTCAGGGCAACCAATATCCGAACCAAAATAATTATTACCCAAATCAACATAGACAAAATAACCATTATGTTTCGTTCAATCAATTTGTTTCACAAATGCAACCGAACGGAGGTCCTAGCACTCACGATCATGAGCAACATGAAGCTTTCGACGCCAATCAATCAGCGCCGTCAACATCCCAAGTATCTCATAACCGGGAAGTAGGTAGCTATGGAAATGTTGATAATGCTCATACTAGTACATCACAAGCATATACTGTTTTAAATTCTAAATTGACACCAACGGCAATGGAATTTGTGCCTAAAAACACGCATTCTCTATATACTCCCGAAGTAGAGGCATCTACGGTCAATGGGTTTGAGACTGATAACCAAGGTAGCTCAAGAAACCGCCGTCCTAATAATAAAGAAGATAGGAAGTTTGATAGAAATCGTAAACCAAATTTAAATAAAAATCGAGATTCTGACTCACAGAGGACATTTTACAATAGTAATTCGAGCCAGGATGTAAGAAATAATTCCAGTCGTAATAAGAATTGGTTTGGTACTCAACGTGGTAGGAGTGATCGGAATCATCTGGATGATGCGAATTATGCTAACAACTATCATCAATATAAAGCTCAATCGAGTCCCAAGAATAAACAGAAAGTTTCTGATCAAGAATTAACGCAAAGAGACAGATTGAGTGAACAACTTAATCAGGGTACCTTAGAATGCCTTGTATGCTGTGAACTCTTGAAGCAGACTGACTCGGTGTGGTCGTGCTCAAACTGCTTTAATATTCAGCATTTGAGATGTATTAAGAAATGGGCTACTAGTAGTATACAAGAAGGTAAATGGCGTTGCCCAGCTTGCCAGAACACAAATGTTGACATCCCATTAGAATACCGTTGTATGTGTGGAGCCGTTCGCAATCCTGAGTCTTTGAGAGGCACTGTCGGTGCCCATACTTGTGGACAATTGTGTTCTCGGCCAAGGAGTTGTAAACATCCTTGTTCTTTACTATGTCATCCGGGCCCATGTCTACCGTGTCAGGCTTCTGTTACCAAAACATGCAGCTGTGGTGCAGAGAGTCGTAAATTAACATGCAGTAATAAACAGCCCCAAACGTGCTCGAGAACTTGTAATAAAAAACTTAATTGTAATGTACATTGTTGCAAACAAACTTGTCATGAAGGACCATGTGAGGATTGCGATAAGATTATTGAACAAGTATGTTACTGTCCTGGAAGTAAAACTCGTGAAATAACATGCGCTGCGGACACCTCATCTTCATCGAACTGGTCATGTGGTTCGGAGTGTGGCAGAGTGCTATCATGTGGCGCCCATGTATGCAGAGAGTCCTGTCATGCCCCACCTTGTGCACCGTGCCAATTACTGCCCAGTCTTGTGCCACTGTGCCCCTGTGGCCAAACTCAAATAAAAGAAGGTCAACGCAAGTCTTGCACGGATCCGATACCTCTTTGTGGTAATTTGTGCGCTAAACGCCTTGAATGTGGCCCCGATGGCGATAATCATTTCTGCAAGGTTGAATGTCATGAAGGTCCTTGTCCAACATGTCCCGATAAGACAGTACTCCCGTGCCAATGCGGTCATATTAACCGCGAAGTGTTATGTGCTAATTTGCCACAGGAAATTAACAATATTTTCTGCCAAAAGAAGTGTAATAAGAAATTGTCATGTGGACGCCATCGTTGTCGTGCGCACTGCTGTACAGATAGCACTCACAGATGCAGATTACAATGTGGACGCACCCTATCCTGCGGTACCCATAGATGTGAAAATACGTGTCATACAGGGCATTGTGCGCCTTGTCCACAAATTAGTTTTGAAGAATTGACATGCGAATGTGGTGCCGAAGTGATCTTTCCACCGATTCGTTGTGGTACCAGACCGCCTTTGTGCAATAAGGAGTGCGGCCGTGTGCGTCCATGTGGTCATCCTCCGCACCACTCCTGCCATAGCGGTGATTGCCCACCCTGTGTCGTGTTGACCAGCAAGAAATGCCATGGACAACATGAGGAGAGAAAAACAATACCGTGTTCCCAGGAAGAATTTTCGTGCGGTTTGCCGTGCGGTAAACCGCTTTCGTGCGGCAAACATAAGTGCATTAAAATATGCCATAAAGGATCTTGCGATTCTGAGGTATGCAAACAACCGTGTACTGAGAAGCGCGAGTGGTGTAACCATCCGTGTGGTGCTCCATGCCATACTGCTTGTGGTGGCCCCTGTCCCACTACCACGCCGTGCCGCCGCCCCGTCACCGCAACGTGCCCGTGCCGCCGAAGGACACTGCAGAAACCATGCGCCGATAACCAACGAGAGCTTAACAAAATAATGAGCGCACTTGCTGCAACTAAGATACAAGAAGGAGAATCGGTGGACTTGGCTGATATGACACGACCGGGAAATAATCTTAAAACTCTAGAATGCGACGATGAATGTCGTGTTGAAGCTCGCACCCGACAGATGGCGCTCGCGTTGCAGATTAAAAACCCGGATATGTCTTCGAAGTTAGCGCCACGATACAGCGAACACGTACGACAGTGGGCTACGAGAGACCAGACATTTGCGCAACATGTACACGATAAACTGACCGATCTGGTTCATCTCGCTAAAAAGTCAAAGCAGAAGACGCGCTCCCATTCCTTCCCGTCAATGAATAGACAAAAACGTCAGTTCATTCACGAGATGTGCGAACATTTTGGCTGTGATTCTGTTGCTTATGATGCCGAGCCTAATAGGAACGTTGTCGCTACGGCCGATAAAGAAAAGTCTTGGTTGCCAGCGATGAGTGTGCTGGAAGTGCTGAGTCGTGAATCAGGCAAGCGTCGTGTTCCAGGCCCCATGTTGCGCAATAATACACAGCAATCCCAATCCACATTAACGCCACAAACATCAAACGCCACTAAATCAACTAGTGGATGGGCGACGTTAACACCGACGAACGCATGGGCGGCTCGCAGTAAACAGCAAGCGGTACCAGAGACAAAACCACCTGTCATAGACTATTTTGATTATCCACCCGATAACTAA
Protein Sequence
MSQWNRDSENWGNSQGNQYPNQNNYYPNQHRQNNHYVSFNQFVSQMQPNGGPSTHDHEQHEAFDANQSAPSTSQVSHNREVGSYGNVDNAHTSTSQAYTVLNSKLTPTAMEFVPKNTHSLYTPEVEASTVNGFETDNQGSSRNRRPNNKEDRKFDRNRKPNLNKNRDSDSQRTFYNSNSSQDVRNNSSRNKNWFGTQRGRSDRNHLDDANYANNYHQYKAQSSPKNKQKVSDQELTQRDRLSEQLNQGTLECLVCCELLKQTDSVWSCSNCFNIQHLRCIKKWATSSIQEGKWRCPACQNTNVDIPLEYRCMCGAVRNPESLRGTVGAHTCGQLCSRPRSCKHPCSLLCHPGPCLPCQASVTKTCSCGAESRKLTCSNKQPQTCSRTCNKKLNCNVHCCKQTCHEGPCEDCDKIIEQVCYCPGSKTREITCAADTSSSSNWSCGSECGRVLSCGAHVCRESCHAPPCAPCQLLPSLVPLCPCGQTQIKEGQRKSCTDPIPLCGNLCAKRLECGPDGDNHFCKVECHEGPCPTCPDKTVLPCQCGHINREVLCANLPQEINNIFCQKKCNKKLSCGRHRCRAHCCTDSTHRCRLQCGRTLSCGTHRCENTCHTGHCAPCPQISFEELTCECGAEVIFPPIRCGTRPPLCNKECGRVRPCGHPPHHSCHSGDCPPCVVLTSKKCHGQHEERKTIPCSQEEFSCGLPCGKPLSCGKHKCIKICHKGSCDSEVCKQPCTEKREWCNHPCGAPCHTACGGPCPTTTPCRRPVTATCPCRRRTLQKPCADNQRELNKIMSALAATKIQEGESVDLADMTRPGNNLKTLECDDECRVEARTRQMALALQIKNPDMSSKLAPRYSEHVRQWATRDQTFAQHVHDKLTDLVHLAKKSKQKTRSHSFPSMNRQKRQFIHEMCEHFGCDSVAYDAEPNRNVVATADKEKSWLPAMSVLEVLSRESGKRRVPGPMLRNNTQQSQSTLTPQTSNATKSTSGWATLTPTNAWAARSKQQAVPETKPPVIDYFDYPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01453781;
90% Identity
-
80% Identity
-