Tbis016619.1
Basic Information
- Insect
- Tineola bisselliella
- Gene Symbol
- nfxl1
- Assembly
- GCA_028551675.1
- Location
- JAPWLS010000634.1:114366-117115[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 2 1.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 16 0.064 5.6e+02 0.7 0.5 4 10 169 175 168 176 0.96 3 16 6.8e-07 0.006 16.6 15.3 3 19 186 202 185 202 0.95 4 16 2 1.8e+04 -4.7 1.7 10 14 209 213 208 213 0.70 5 16 1.4e-07 0.0012 18.8 12.0 3 19 239 255 237 255 0.91 6 16 0.57 5e+03 -2.4 2.0 6 10 280 284 279 284 0.90 7 16 2.8e-08 0.00024 21.0 10.1 1 19 290 308 290 308 0.99 8 16 7.7e-08 0.00069 19.6 16.8 3 19 345 361 336 361 0.89 9 16 0.00023 2 8.5 17.4 1 18 395 412 395 413 0.94 10 16 4.9e-10 4.4e-06 26.6 12.7 1 19 422 440 422 440 0.99 11 16 0.0019 16 5.6 9.5 9 19 488 498 479 498 0.86 12 16 0.0056 49 4.0 6.5 3 11 509 517 508 518 0.89 13 16 0.3 2.6e+03 -1.5 3.5 14 18 547 551 547 552 0.87 14 16 1.8e-05 0.16 12.0 3.5 1 11 588 598 588 599 0.97 15 16 0.00059 5.2 7.2 13.6 3 18 629 645 628 646 0.87 16 16 7.1e-06 0.063 13.3 13.1 1 15 687 700 687 706 0.88
Sequence Information
- Coding Sequence
- ATGTCAAGACGTTACCAAGATGCCGCTGCTAGATTGCAGCAGAACGTTGAACAACATCTACGTGAGTTGAAAGAGTACTCTAGTTCTGAAGAAGATGAGCCGGTGGATGAGAGCGTTCTGGAAACCGTTCTGCAAAGTTATCACAGAGGCGGTGGAGATACGCAACTGTTACATAGAACGAAGTATCTTCTAGAAGAAACAATAACAAGCAGGAATATAACATGTTTAATTTGCATTGGTACTGTGAAACGGGCTGACGCAATTTGGAATTGTAGAGATTGTTATTCATACTTTCATCTTATTTGCATACAGAAGTGGTCTAATGACAGCATTAGTTTAAGATCTGGGGAGAATCAGGGTCCTTTGACTGTTGTAAGGTCTATGAAAATAGAATGGTGCTGTCCAAAATGCCGCCATTCGTACACCAAAGAAGAAATACCCCGCAAATACTATTGCTTCTGTGGTAAACTGGATAACCCACCCACACACCCATGGTTATTACCGCATTCCTGTGGTGAAGTGTGCCGCAAACAACTATCTACTGGTGACAACTGCAAACACAAATGCTTACTGCTCTGCCATCCTGGACAGTGCCCCCCGTGTCCACAGACTATTAACGGAGCATGCCACTGTGGCAACAATCGCAGGAGTGTTCGGTGCAGTGCCCCGAACTGGTCTTGTGGCAAAAAGTGCAACAAACTGCTCACATGCAAGTCTCACAGGTGTGAAGACATCTGTCATGAAGGAGAATGCTCCCCCTGCACTTTCACCAGCATACAATCATGTAATTGCGGCTCAGAGAAGGTGAAAAGGCCTTGTAATGACCCAACTTGGCAATGTCAGAAAGTATGTAACAAACCATACACATGTGGCTATCACAACTGTACATTTACATGCCATTCTGGTGCTTGTGGTGATTGTCCTAACTCAGGCGTCCGTTCCTGCCCGTGTGGTGCCAACCAGAAGTACGTCCAATGTCCTGATGTTATTGAAACTTGTGTCAGCACCTGCGGCAAGAAGAGAGAAGATTGCGCACATACATGTCCTGAGAAGTGTCACAAGGGTCCGTGCCCACCGTGTCAGGTTTTAATAGAAAAGAAATGCCAGTGTTCCTCTCATAAGCGAGCCCTACCATGCAGCAGGGATTTTAAATGTGACACAAAATGCAGAGGTACACGCCCTTGCAATAAACACAGCTGTGGTAGAAAGTGCTGCAATGGAAACTGCCCTCCTTGTGAAAAAAGCTGCGATAAACCTCTACATTGTGGACGACATAAGTGCACAATGATTTGTCACTCGGGTCCTTGCTACCCTTGCCCGTTGGAGTCTAAAATAACTTGTCGCTGCAAACAAACAGCTGTATTCGTCCCTTGCGGCCGAGAAAGAAATGTCCGACCACCAAAATGTAATTTGAGTTGCAAGTTGAAATACAAATGTGGTCACAAAGCCGAGAATGAACATCAATGCCATTTCGGCGATTGCCCTCCGTGCAAAGCGATCTGTGACAAGCCATACCCCAAATGTGAGCATAAATGCAAGGCCCTGTGTCATGTGGCTGTTGCAGTCGTATTTAAGCAGGTGGAGAAACCATCGACACCTTGGGATATTCAGCCGCCTCGAACAAGGATCATGAATTTGGACTGCCCTCCCTGTAATACAATAGTTTCTTTGGAATGTTTTGGTCTACATGAGATCATGGCTCAGAGATGCTTTGAGGCGAGGCGACGGCCTTGTGGGAGAGTGTGTGGGCGTCCACTACCATGTGGTAATCATGATTGTAGCCTACTCTGCCATTTGCTAGCTCCCGATGAGGAGTACCCTGATATACCTTCCAGTTGTGAAGATTGCAGAGAGGAGTGCCTCGTTGCTAGACCTGAAAAATGTACCCACAAATGTTCTCTACAGTCATGTCACCCAGGGAGCTGTCCATCTTGTGAGGTCAGGGAGAAAATACAATGTCATTGTGGGCTGACACAGTTTTATTTCAAATGTAAGGAGTTGGTTTCAGTGACTGAAGACATGTTGTCATGTAAGCAGCAATGTACCAAAAACCTTGATTGTGGTCATAGGTGTAAGAATAGTTGTCACTCTGGGCCTTGTGTCGGCCAAGTCTGTACAAGAAAAGTAAAGAGCTATTGTGGATGCGGTAATTTGAAGAAAGACTTGCAATGTACTTTGGTAAGAAGTGGCGAGGCTAAAGTGTTATGTGATGAAAGTTGCACTGAAAAGAAACTTGCTGCGAAAATAGAGAAAGAAAAGGAGGAAGAAAGACTTAAGAAGATGGAAGAGGAGAAGAATAAAAGAGAGCTTGCGGAGTATGAGTGGAAATTCGGAAAGAAACGCAAGCATAAGGGAAGGACGGAGTCGCAGATTGTAACTAAACATAAGACTGGCTGGTTGCACAAATTTTGGATTCCTATTTTATCTTTCTTTGTAATTGTTATAGCCATTGTTGGTTATATATTTATGTAG
- Protein Sequence
- MSRRYQDAAARLQQNVEQHLRELKEYSSSEEDEPVDESVLETVLQSYHRGGGDTQLLHRTKYLLEETITSRNITCLICIGTVKRADAIWNCRDCYSYFHLICIQKWSNDSISLRSGENQGPLTVVRSMKIEWCCPKCRHSYTKEEIPRKYYCFCGKLDNPPTHPWLLPHSCGEVCRKQLSTGDNCKHKCLLLCHPGQCPPCPQTINGACHCGNNRRSVRCSAPNWSCGKKCNKLLTCKSHRCEDICHEGECSPCTFTSIQSCNCGSEKVKRPCNDPTWQCQKVCNKPYTCGYHNCTFTCHSGACGDCPNSGVRSCPCGANQKYVQCPDVIETCVSTCGKKREDCAHTCPEKCHKGPCPPCQVLIEKKCQCSSHKRALPCSRDFKCDTKCRGTRPCNKHSCGRKCCNGNCPPCEKSCDKPLHCGRHKCTMICHSGPCYPCPLESKITCRCKQTAVFVPCGRERNVRPPKCNLSCKLKYKCGHKAENEHQCHFGDCPPCKAICDKPYPKCEHKCKALCHVAVAVVFKQVEKPSTPWDIQPPRTRIMNLDCPPCNTIVSLECFGLHEIMAQRCFEARRRPCGRVCGRPLPCGNHDCSLLCHLLAPDEEYPDIPSSCEDCREECLVARPEKCTHKCSLQSCHPGSCPSCEVREKIQCHCGLTQFYFKCKELVSVTEDMLSCKQQCTKNLDCGHRCKNSCHSGPCVGQVCTRKVKSYCGCGNLKKDLQCTLVRSGEAKVLCDESCTEKKLAAKIEKEKEEERLKKMEEEKNKRELAEYEWKFGKKRKHKGRTESQIVTKHKTGWLHKFWIPILSFFVIVIAIVGYIFM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01452955;
- 90% Identity
- -
- 80% Identity
- -