Ttri010749.1
Basic Information
- Insect
- Tinea trinotella
- Gene Symbol
- nfxl1
- Assembly
- GCA_905220615.1
- Location
- HG992329.1:430224-433391[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.61 6.5e+03 -2.5 0.3 14 18 90 94 90 95 0.79 2 17 2 2.1e+04 -7.8 5.6 15 19 130 134 129 134 0.81 3 17 0.063 6.8e+02 0.7 0.5 4 10 165 171 164 172 0.96 4 17 6.7e-07 0.0072 16.6 15.3 3 19 182 198 181 198 0.95 5 17 5.7e-08 0.00061 20.0 11.5 3 19 235 251 233 251 0.91 6 17 1.1 1.2e+04 -3.3 1.2 6 10 276 280 275 280 0.89 7 17 2.3e-09 2.5e-05 24.5 14.7 1 19 286 304 286 304 0.99 8 17 4.2e-08 0.00045 20.4 17.0 3 19 341 357 333 357 0.84 9 17 0.0028 30 5.0 18.5 1 18 391 408 391 409 0.94 10 17 5e-10 5.4e-06 26.6 13.0 1 19 418 436 418 436 0.99 11 17 8.9e-05 0.96 9.8 5.3 9 19 484 494 482 494 0.88 12 17 0.07 7.5e+02 0.5 6.2 3 11 505 513 504 514 0.90 13 17 0.43 4.6e+03 -2.0 3.5 15 19 544 548 543 548 0.83 14 17 1.8e-05 0.19 12.0 3.5 1 11 584 594 584 595 0.97 15 17 0.00075 8 6.8 13.5 8 18 631 641 624 642 0.81 16 17 2 2.1e+04 -4.9 2.2 9 13 648 652 647 652 0.74 17 17 2.6e-06 0.028 14.7 13.3 1 15 683 696 683 702 0.88
Sequence Information
- Coding Sequence
- ATGTCGCAACGTTATAGCGACGCTGCTGCAAAACTACAACGGAATGTTCAACACCATTTGCGTGAAATGAAAGAATATTCATCATCGGAAGAAGATGAACCGGTGGAAGTTAGCGTGCTTGAATCTGTACTCCAGAGTTATAATAGGGGTGGAGGTGACACACAGCTGCTGCAAAGAACAAAGAATCTACTAGAAGAAACAATAGCAGGAAGAAATATAACGTGTTTAATATGTATTGGCTCTATAAAGAGACTCGATGCAATATGGAATTGTGGGAGCTGCTACTCGTACTTCCACCTTATTTGCATACAGAAATGGGCTAACGATAGCATCACTTTGAGGTCTGAGGAGTTTCATATTATGAGTCCAATAAAAATAGAATGGTGCTGCCCAAAATGTCGTCACTCATACACCAAAGAAGAGATACCACGGAAATACTACTGTTTTTGTGGCAAAGTGGACAACCCACCAACACACCCCTGGTTGCTGCCACATTCATGCGGGGAAGTCTGTCGGAAACAATTGTCCACTGGGGATAAGTGCAAACATAAATGCTTGCTGCTCTGCCATCCTGGACAATGTCCCCCGTGCCCGCAAACTATAAATGGCGCTTGCTTCTGTGGCAACAATCGCAGGAGTGTGCGATGCAGCGCTCCAAATTGGTCTTGCGGTAAAAAATGTAATAACTTCCTTTTATGTAAGTCACACCGCTGTGAGGACATTTGCCATGAAGGAGACTGTTCCCCGTGCACTTTCACTAGTCTCCAGTCTTGCAAATGTGGCGCCAACAAGATGAAGCGGCCATGCAGTGATTCAACGTGGCAGTGCAACAAGGTCTGCAACAAACCATATGATTGCGGTTATCATAAATGCCAATTGACATGTCATTCTGGTCCATGTGGCTCTTGTCCAAATTCAGGTGTCCGTTCTTGCCCCTGCGGTGCTAATCAGAAGTTTGTCCAATGCCCTGATGTTATTGACACTTGTGTTGGCACCTGTGGCAAAAAGAAAGATGACTGCATCCACACTTGCCCAGAGAAATGCCACAAAGGCCCATGCCCTCCATGCCAAGTGGTTATTGAGAAGAAATGTCAATGTGCTTCGCACGTCAAATCATTGCCGTGCAGCCGCGAATTCAGATGCGATACTAAATGTCGTGGCACACGCCCCTGTAATAAACATGGATGCGGACGCAAGTGCTGCAATGGAAACTGTCCCCCATGCGAGAAGGTGTGCGACAAGCCATTGCATTGCGGCCGACACAAATGCACAATGGTGTGCCACCGAGGCCCATGCTACCCGTGCCCCTTGGAATCGAAAATAACATGTCGCTGCAAACAGACCGCTATATCTGTCCCATGCGGCAGAGAAAGAAGTGTGCGGCCGCCGAAATGCAATATTAATTGTAAATTGAAGTACAAATGTGGCCATAGAATGGAAAACCAACATTTTTGTCACTTTGGAGACTGCCCACCATGCAAAGGCATATGTGATAAGGTATACCCCAAATGTCAGCATAGGTGCATGGCGCAATGTCACGTGGCCGTTGCAGTTGTGTTCAAACAGGTTGAGAAGCCAGCAACACCTTGGGACATTCAGCCTCCGCAAACAAAAATCATGAACTTATCATGCCCACCTTGTACCACAATAGTATCATTGGCATGCTTTGGCGAGCATGAGATCATGGATCAGAAATGCTTTGAGGCAAGTCGTAAACCATGCGGTCGCAATTGCGGTCGACCATTGCCATGTGGTAATCACGATTGTAGTCTCTTATGTCATTTATTGTCCCCTGATGAGCAATATCCCGGAGTTCCTTCGAGTTGTGAGAATTGCGCCCGTGAGTGTGTTGTGCCACGGCCTGATCGTTGCACGCACATATGTCCCTTGCAGCGCTGTCACCCTGGCGACTGTCCACCGTGTGACGTCAGGGAGAAATTGCCCTGTCATTGTGGACTGACGCAACTTTACTTCAAATGCAGAGAGCTAATTAATGTAACAGATGAGATGTTGTCATGCAAGCAACAATGTACTAAAAACTTGGATTGTGGTCACAGATGCAAGAATACATGTCACTCTGGCCCCTGTGTAGGACAAGTGTGCACACGGAAAGTTAAGACATACTGTGACTGTGGTAACTTGAAGAAAGACTTACAATGCAGTTTGGTGAAAAGTGGTGAGGTGAAAGTTTTATGTGATAATAGTTGTGCTGAAAAGAAACTGGCTGCTCAAAAAGAGAAAGAACTAGAAGAGGAAAGACTCCGGAAGTTGGAAGAGGAGAAGAATAAAAGAGAACTCGCTGAGTATGAGTGGAAGTTTGAAAAGAAACGTAGACATAAGGAGAAGAAACAGGTTGTTACTAAAAATGAGGCTGGCTGGTTACAGAAATTTTGGATTCCTATTTTGTCTGTACTCTTTATTTGTATTTCCATTATTTGTTACTTATTCATTTAA
- Protein Sequence
- MSQRYSDAAAKLQRNVQHHLREMKEYSSSEEDEPVEVSVLESVLQSYNRGGGDTQLLQRTKNLLEETIAGRNITCLICIGSIKRLDAIWNCGSCYSYFHLICIQKWANDSITLRSEEFHIMSPIKIEWCCPKCRHSYTKEEIPRKYYCFCGKVDNPPTHPWLLPHSCGEVCRKQLSTGDKCKHKCLLLCHPGQCPPCPQTINGACFCGNNRRSVRCSAPNWSCGKKCNNFLLCKSHRCEDICHEGDCSPCTFTSLQSCKCGANKMKRPCSDSTWQCNKVCNKPYDCGYHKCQLTCHSGPCGSCPNSGVRSCPCGANQKFVQCPDVIDTCVGTCGKKKDDCIHTCPEKCHKGPCPPCQVVIEKKCQCASHVKSLPCSREFRCDTKCRGTRPCNKHGCGRKCCNGNCPPCEKVCDKPLHCGRHKCTMVCHRGPCYPCPLESKITCRCKQTAISVPCGRERSVRPPKCNINCKLKYKCGHRMENQHFCHFGDCPPCKGICDKVYPKCQHRCMAQCHVAVAVVFKQVEKPATPWDIQPPQTKIMNLSCPPCTTIVSLACFGEHEIMDQKCFEASRKPCGRNCGRPLPCGNHDCSLLCHLLSPDEQYPGVPSSCENCARECVVPRPDRCTHICPLQRCHPGDCPPCDVREKLPCHCGLTQLYFKCRELINVTDEMLSCKQQCTKNLDCGHRCKNTCHSGPCVGQVCTRKVKTYCDCGNLKKDLQCSLVKSGEVKVLCDNSCAEKKLAAQKEKELEEERLRKLEEEKNKRELAEYEWKFEKKRRHKEKKQVVTKNEAGWLQKFWIPILSVLFICISIICYLFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01452019; iTF_01453780;
- 90% Identity
- -
- 80% Identity
- -