Tbis007232.1
Basic Information
- Insect
- Tineola bisselliella
- Gene Symbol
- ZFY
- Assembly
- GCA_028551675.1
- Location
- JAPWLS010000507.1:176751-178310[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.002 0.11 13.0 0.1 2 23 140 161 139 161 0.97 2 13 3.6e-06 0.0002 21.6 0.8 1 23 167 189 167 189 0.97 3 13 0.047 2.6 8.7 1.0 2 23 203 224 202 224 0.95 4 13 7e-05 0.0038 17.6 1.0 1 23 230 253 230 253 0.90 5 13 4e-05 0.0022 18.3 0.6 1 23 260 282 260 282 0.97 6 13 0.00036 0.019 15.4 3.7 1 21 288 308 288 310 0.93 7 13 0.0038 0.21 12.1 7.7 1 23 316 338 316 338 0.96 8 13 0.00039 0.021 15.2 3.3 1 23 344 366 344 366 0.95 9 13 1.9 1e+02 3.6 1.8 2 23 372 394 371 394 0.93 10 13 0.0004 0.022 15.2 0.9 5 23 400 418 398 418 0.97 11 13 0.0055 0.3 11.6 0.6 1 22 424 445 424 447 0.90 12 13 0.0072 0.39 11.3 0.1 1 23 453 478 453 478 0.95 13 13 0.0014 0.077 13.5 7.2 1 23 484 507 484 507 0.95
Sequence Information
- Coding Sequence
- ATGGAGCCAAAAATATGCCGAACATGTCTTCATAATAATGGGTCTGTTTCTTTATTTTGTGAATCCAGTGAGACGAAAATTTGTGCCAAAATAATGCGCCTGACAGGCATCATAATAGACAAATACGACGGTCTGCCCAGCCATATCTGCACGGCCTGCGAATCCGATCTGAATGTGGCCTGCAATTACATAAACAAATGTGAAGAATCAGAGAAGATTTTAAGAGAAAAACAATATAACATTGTAGAGTTCGACAATGGGTTGATGGAAATCAAAACTGAGCAAATAGACGATTATGATTCATCGCAGTTCTTGGACAGTCAGGAGGATTCAGCAGAACTGCCTGAAAAAGAAGTGGAGGCGAAAACTAGAAGCAAGTCTGTAAAGTCCCGCAGAAAGAAAGTGGAAGCAAAGATATCATGTGAGGTGTGTGGGCGGAAAGTAGTTTGTCAGTCTGCACTAGCAATACATATGAGAGTGCACACGGGAGAGAAGCCATTTGAATGTGAAAAATGTGATAAAAGATTCGCCACCAAGTCACAAGTCAAGTTGCACCTCAATGCACATCTCAAGATACGCAAGCAGAGTATGCGGCCCAAGAAGTTGAAGTGCCTTCAATGCGGCAAACTATGCCAGGGTCCGTCTGCATTGAAGACACATTCACTGTCACATAGTGGTGAGAGGCCTTACCAATGTACACAGTGTCCTAAACAATTCAGGTACCAGGGTGGGCTGAAGAACCACTTTGAAGCCAACCATTGTGTGAGGGAGAGGAAGTACATATGTGACTATTGCAATGTGAAGTTCTACTCCAAAGCCACGTTGATACGCCATCTGTACATACACACTGATTTCAAACCATACTTATGCGCCCACTGCCCGCAGAGGTTCAGGCAGCAATCCGCGCTCATCAGACACACTAGGTGCCACACGGGCGAGCGGCCTTACTCATGCACCATATGTGGCAAGTGCTTCCCATGCAACAGCAGTCTCCGGCATCACAAAGTGAAGCACACGGACGAGGCTAATTATAAATGCGATGAATGCGGGAAGATGTTTAAATCTAAAGAGAGACTCCGCTGTCATGGCAAGATACACAAGCACAAGAGTTTGGTGTGCAACTGCTGTGGCATGCAGTTCACATGGAAGGGGTGTCTGGATGCACACGTGAGACGGGTGCACTCGGAGAGATCCGGCCACTGTGAAGTGTGCTTCAAGCAGGTCTCTGATCTGGAAGTGCACATGAGGAAGCACACGGGGGAGAAGCCCTTTCCCTGTGACGAGTGTGACAGTGCATTCAGCACAGCCCTGAGCCTCAAACTGCACAAGACATTCAAGCATGCTGAGGGCGGCAAGTATGAGTGTGCTTACGGCGGTTGCACTAAGACATTCCCCATCCCCTCCATGTTGGAGTACCATGTGTTGAAGTACCACACGCACAGCACGCCGCATGTCTGCAAACACTGCAACAAGGGCTTCTTCCGCATGTGCGATCTCAACAGACATTTAAGAGCTAACCACTCAACTTCAGAACAAATTAAAAAATCTCCAAAAGAATAG
- Protein Sequence
- MEPKICRTCLHNNGSVSLFCESSETKICAKIMRLTGIIIDKYDGLPSHICTACESDLNVACNYINKCEESEKILREKQYNIVEFDNGLMEIKTEQIDDYDSSQFLDSQEDSAELPEKEVEAKTRSKSVKSRRKKVEAKISCEVCGRKVVCQSALAIHMRVHTGEKPFECEKCDKRFATKSQVKLHLNAHLKIRKQSMRPKKLKCLQCGKLCQGPSALKTHSLSHSGERPYQCTQCPKQFRYQGGLKNHFEANHCVRERKYICDYCNVKFYSKATLIRHLYIHTDFKPYLCAHCPQRFRQQSALIRHTRCHTGERPYSCTICGKCFPCNSSLRHHKVKHTDEANYKCDECGKMFKSKERLRCHGKIHKHKSLVCNCCGMQFTWKGCLDAHVRRVHSERSGHCEVCFKQVSDLEVHMRKHTGEKPFPCDECDSAFSTALSLKLHKTFKHAEGGKYECAYGGCTKTFPIPSMLEYHVLKYHTHSTPHVCKHCNKGFFRMCDLNRHLRANHSTSEQIKKSPKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01451720;
- 90% Identity
- -
- 80% Identity
- -