Tbis012961.1
Basic Information
- Insect
- Tineola bisselliella
- Gene Symbol
- -
- Assembly
- GCA_028551675.1
- Location
- JAPWLS010001974.1:29740-35150[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 0.00055 0.03 14.8 1.6 1 23 182 204 182 204 0.98 2 31 0.00046 0.025 15.0 0.2 3 22 235 254 234 254 0.94 3 31 7.7e-05 0.0042 17.5 0.5 1 23 270 293 270 293 0.97 4 31 2 1.1e+02 3.6 0.5 2 12 308 318 307 320 0.88 5 31 0.0042 0.23 12.0 0.8 1 23 338 361 338 361 0.96 6 31 0.00026 0.014 15.8 0.1 1 23 379 401 379 401 0.95 7 31 1.5e-06 8.3e-05 22.8 1.4 2 23 440 461 439 461 0.97 8 31 0.00043 0.023 15.1 1.3 2 23 507 529 507 529 0.94 9 31 2e-05 0.0011 19.3 2.2 1 23 579 602 579 602 0.97 10 31 0.00049 0.027 14.9 0.5 1 23 657 679 657 679 0.97 11 31 0.0022 0.12 12.8 1.3 2 23 691 712 690 712 0.96 12 31 0.47 26 5.5 4.4 2 23 724 745 723 745 0.96 13 31 0.0034 0.18 12.3 1.2 1 23 755 777 755 777 0.98 14 31 0.54 29 5.4 7.1 1 23 800 822 800 822 0.97 15 31 0.0014 0.076 13.5 0.9 1 23 833 855 833 855 0.98 16 31 1.8e-05 0.00099 19.4 1.7 1 23 863 885 863 885 0.98 17 31 0.00026 0.014 15.8 0.1 2 23 905 927 904 927 0.97 18 31 0.086 4.7 7.9 3.5 1 23 945 967 945 972 0.97 19 31 5.9 3.2e+02 2.1 0.6 1 9 974 982 974 996 0.85 20 31 0.0016 0.086 13.3 0.9 2 23 1007 1029 1006 1029 0.96 21 31 0.49 26 5.5 0.1 2 23 1052 1073 1051 1073 0.94 22 31 0.36 20 5.9 0.3 2 20 1077 1095 1076 1096 0.92 23 31 0.0018 0.099 13.1 0.1 2 23 1154 1175 1153 1175 0.94 24 31 2.9 1.6e+02 3.0 2.5 5 23 1185 1203 1182 1203 0.92 25 31 0.0012 0.067 13.7 0.7 2 23 1214 1236 1213 1236 0.96 26 31 0.041 2.2 8.9 1.0 2 23 1253 1271 1253 1271 0.94 27 31 9.9 5.4e+02 1.4 1.2 2 19 1275 1292 1274 1294 0.75 28 31 1.4 75 4.1 0.5 2 23 1345 1366 1344 1366 0.93 29 31 0.0064 0.35 11.4 0.4 2 23 1377 1399 1376 1399 0.95 30 31 1.2 65 4.3 0.3 3 23 1416 1433 1415 1433 0.78 31 31 2.6 1.4e+02 3.2 1.3 2 20 1437 1455 1437 1457 0.90
Sequence Information
- Coding Sequence
- ATGGCACTCAAACTTGGAAAATGTAGGCTCTGTCTCAAACTTGGAGATTTTTACTCCATATTTACTATCGACAATGCCATCCAACTGTCCGAAATGGCCATGGAATGCGCTAAGATCAAGATTTACGACGGAGATGGTTTGCCTGATAAGATATGCTCAGAGTGCATAGAGAAACTTAGTGGTGCTTATATATTCAAGCAGCAGTGTGAACGCGCTGATGAACAACTTCGGCGAAACTATGTACCTCCACCAGGATTCAACATCACACCTTCACCCACCAGACAAAGCAGTGATTCGGGTATCTCACACCGCACAGATGTTTCCAATAAAGTCAAGAAGTCAATTGAGCCAGAATCCAGTACATCGTCAGTTCGCAAACGGAGCCTTGAAAGTGTAGACACTTCTAACAATGGTGGCAAATACAGATACAAGCCATCCACCTCCAAACCTCGTGACAAGAGAGCTCGGCCAACATATGATTCTGATGAAGACTACACAGCCTCACAAGCTTCTGTGGACACCGACTCTGATGATCCTGTTATGCACAAATGCGACTTGTGTGACAAGACATTTCCCAGCAGAAGAAGCATGTTGCTTCATGGTCGTGTGCATAGTAGAGAGAACAACATACCCAAAAGCCATTTCGTAGAAATACCTTTGGACAATAGTGACATTGTTGCTGTAGATGAAGATAAAGTTGCCTGTGATGGATGTGGCAAGACTTTCAAACTAAAGATAATGCTCAACCGACACTATCTCACGTGTCCCAACAAGACCCAGGACAATGATGCATCCGAGACAAGCGAGTTCACTTGCAAATTGTGTAATGAAAAGTATAAAACAATAGATGGCTTGACAAGGCATATAAAAGTTGCTCACAACAGTTCAGCGCCCAATCCTGAGCCGAAGAATGTCCCTGTGCCGTGCCTGTATTGTCACAAGCCATTCACGGACTACTTTGTCCATGCTTCTCATTTCAATTCATGCAACATGCGATCTGCTATAAACACTTACAATTGCCTGCTATGTAAAAGAAAGTTTGGCAGAAAGGGTGCATATTTCTCTCACATCAGAGATGCCCATTTTAATAATTCTATAGCTAATAATGAAGATGGCGAAGAACCAAAAGAATCATATGATTGTCGCTTGTGTGGTAGAAGTGTGTCTTCACAGGATGAGCTGATCAAGCATCTTGCCGCACACATGTCTAACATAGATGAGACTGGAGCTACTTCTGAAGCTGATGATAGAAACAGCATGGTGGACGATATGCAGTCAAATTATTCAGGCGCGTCTAGTCAAGCAAGCCGAAGTGTAAAATGCAAATATTGCGATAAAGTGTTCACTTATAAAAAGGCATTGTTGAACCACATGTTGAAGCACACTGCTGACAATATACCTCTAAAGGAAGAGCCCGTAGATCTGGAACCTGATCCTCCACCTTCCTCCCACACCACTCAAAATGATCAACATTATGATGATTTTGGTGAAGAAGAGGAGTTGAGTGATGATGATAACACTTGTGACATCTGTGACAAACAGTTCTCATATAAGCGGCTGTTGATACAGCATAAAAAAGCTAAACATAATAAAAGTTCTGGGTTTAAGCGTGCAGATGTATATTTGAAGGATTGCGATGTGAAGTGCCTAATCTGTGACATTGACATGAAGGTGTCTCAGGGCAATGAACATAACAAGAAGCATGCAGCTGCCGGAACAAAGCCCCGTAATTTGTACACGTGCAAGGCCTGTGGCGAGACGTTCAAGTCTTGCTCTAACCTCTCGACTCACATTCAAATAACACACAGGATAAAGAAAAACTCCATCGAAAGCGTAAATATGGCGGATTTTTGTGAAGTCGTTGTGACAAAGACGGAACCCCTGGACGACATCCAGAGTCACAACGACTTAGGGGAGGTTCCGGGCAAATCTGTTGATAGTAAAAATATACTAGCAGATCTCGAAGGCTTCACGTGTAGTATCTGCGGTAAGAAGATGCCCACGCTGACGTCACTTAAGAGGCATGTCAACTGGCATTCTGGTGTTGGGAGCAAGCTTGAGTCTAAACTTGAATGTTTTGTGTGTAAATTGACATTTCGTTTCAAAGGTCAGTATAAATTGCACATGCAAGAACATTACCGGGATCCCAATATAGATCCGAAGTTTTTGACATGCCATATTTGTAATCGGAAAAGTAAGCACTTGAGGGCGGCTCAGATGCATATGAACTTTCACAAACAAACCAGATTCGGCAGCAAGGACTACCGATGCGCCATTTGTGAGAAAGTCTTCCAACACAGAAAGGTGTACCTAACACACATGGCCATACATTACAAGCGCCAAGACGGGTTCCAGAATGTCAGCATCGGGGAGGGCACCAACAACAGCGAAGGGAAACACCAGTGTCCACATTGTGAGAAGAAGTGCGATTCCCTAGCTTCTCTCAAATGCCACATCAACTGGCACAACTCGAAGGCGTCCCTTTACGGCGCGCGGTACAACTGCGACTTCTGCGACAAAATATTTACCAACAAGAAGGGGCGTGATATCCATCTCCGTATTCACTATGAACATGAAAATGGGCCCTACAAGTGTCATATCTGCGGTAAGGGCTTCATTGACGAAAACTACTACCGCCGACACGTGAAAGGACACAACTTCGACCACCAGTCACACAAGATCCGTATCGCCAAACTGAGAGCCAACAAAGTGAAATGCCCAATATGTCCGCGATACTATCCCAACCTAATAAAGCTCATACGTCACATACGGCGCACTCACCCAGAGACCAAGATGATCAAGGAGGACCCTGACGCTCCCGCACTCACCCTATTCCATTGCAAGGTATGCGCCAAGGCCTTCAGGACTGAGAGACGACTCGCAACACATGAGAGCTCACATCTCAGGAGGCATCAGTTCTTTAAGTGCAAGTTCTGTGGTAGGAAGTCACTCTCTCTTCGTTTTCACAATGTCCATATCAAGGCCCATCTCACCAAGAAGTATGTGGATGAGCCTCTCCAGTGTCCGCATTGCCCAGAGACCTTCGTTTTGGGATACGCTTTACACAAACACCTGAAATCGGCACATGACATTGAGGAGAGCTGGATTGCTGAGGGTACTCAGGCCGATGAGGATGGAGAACTTCAGGAGTTGCAGTGCGGCGTTTGCATGAAGGTGTTGGCATCCAAGGGTAACTTCGGACGACACATCGACTTCCACAACATGTTACGATGTAATTATTGCTTTGAATATTTCTCATCACTCAAATTTTTGGAAGGTCACCTTGCTTTCTCTTGTGAGAAGAAGAAACTATTGGGAGACACGGAAGTCCATCCGAAGAGAGTCAAGTGTCATCTTTGCTACAAAGCATTTCACGTTCAGGTAAAACTGGACTGCCACTTGCGCACACGCCACGGCATTCTTGTGAAGAGGGAACGGCGGGAGAAAGAGAGGGAGATAGTGTGTGATTATTGCTTCAGAGTGTTTGAGAACGAGGATGCACTGAACGCGCACAGAGTTTATCACCGCACGGTCGGCTATTACGGCTGCATTTATTGCAGCAGGAAATTCAACACCATGGCATTATACAAGAAGCACAAGGCCCATCATTTATACCAACTCAACGTGGACAATCCAACAAAATGCGAGCATTGCGATGAGACCTTTGTGCCTTTCAGAGAGTTTATAGACCACATGCGCGAGGTCCATGGAGATGATAAGGACTGGGTGGTGATGCCCAAGGAGTCGGTGGATGGAGTTTGCAACATCTGCAATAAGGAGTTCAATAATCTACAAAGACATCTACAGTTGCATGAAGAGAATAAGTGTAAGAAATGCGGCGAATATTTCCTGTCACGTCCGGCCTACGACAACCACCTGTGCGACATCGAGAGCGACGACGCAGCCGAGACTGAGGCCAGCGCACAGGACGCGCCGTGCAAATACGAGGAGTGCTCGTTCTGCTTCAAGGCGCTGACGAAAGGCAATTCGAAGTTGCAGCATGACCTCATTCACAGAGGCTCCGGCTCCATTTCGTGTCGCTTCTGTGCATTGAGATTTAAGACCATGGACGCTTTCAACATACACGCGTTCTCGCATAGGAGCCGGAAGTACACGAAGAACCCTCTCAAGTGCCGGAAGTGCGACGAACAGTTCGTCAAGTATGGGCCGTTTATAAAGCACATGAGGGCAGTCCACAACCTGCATGAGAAGATGCATTACCGGCGCACGGTGCTGCCGGAGCCCTGCGCCATCTGCGGCGCTTCGTTCCCCAATCTGCACAACCACTACCGCGCGCATCTCCTCAACCGCTGCCTCGAGTGCGGCTTGTACTTCACTTCCGCTCGAGTGTTCCACGCCCATAAGTGCGGCGAGACGGATGCCACCGACGAACATGTTTTCCAGTCGGACGTGGATGTCGCCAAACTCATACAAGAATACGCGCCCAAGGACACAACTGATGACCAGAATTATTATGGACACAATGAAGATGAACCAATAGTCCAGACGAATTCTATAGCACCAAGTTTAACTTCGCAGATACCTGCAGAACCACTGGTGCCTATTTCGATTCAGTCGCCTTTGATCTCTGACGTGCTATTGGCATACGAGGAACAGCAGAAAATGAACAAAAAGGAAGCGGCTGTTGATGATGACGATGATGATGTGGTTGAGATTTTAGATGATGACCCAGTTGTTGCCTCGCATCCGATTATCATTATTGATGATTAG
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTIDNAIQLSEMAMECAKIKIYDGDGLPDKICSECIEKLSGAYIFKQQCERADEQLRRNYVPPPGFNITPSPTRQSSDSGISHRTDVSNKVKKSIEPESSTSSVRKRSLESVDTSNNGGKYRYKPSTSKPRDKRARPTYDSDEDYTASQASVDTDSDDPVMHKCDLCDKTFPSRRSMLLHGRVHSRENNIPKSHFVEIPLDNSDIVAVDEDKVACDGCGKTFKLKIMLNRHYLTCPNKTQDNDASETSEFTCKLCNEKYKTIDGLTRHIKVAHNSSAPNPEPKNVPVPCLYCHKPFTDYFVHASHFNSCNMRSAINTYNCLLCKRKFGRKGAYFSHIRDAHFNNSIANNEDGEEPKESYDCRLCGRSVSSQDELIKHLAAHMSNIDETGATSEADDRNSMVDDMQSNYSGASSQASRSVKCKYCDKVFTYKKALLNHMLKHTADNIPLKEEPVDLEPDPPPSSHTTQNDQHYDDFGEEEELSDDDNTCDICDKQFSYKRLLIQHKKAKHNKSSGFKRADVYLKDCDVKCLICDIDMKVSQGNEHNKKHAAAGTKPRNLYTCKACGETFKSCSNLSTHIQITHRIKKNSIESVNMADFCEVVVTKTEPLDDIQSHNDLGEVPGKSVDSKNILADLEGFTCSICGKKMPTLTSLKRHVNWHSGVGSKLESKLECFVCKLTFRFKGQYKLHMQEHYRDPNIDPKFLTCHICNRKSKHLRAAQMHMNFHKQTRFGSKDYRCAICEKVFQHRKVYLTHMAIHYKRQDGFQNVSIGEGTNNSEGKHQCPHCEKKCDSLASLKCHINWHNSKASLYGARYNCDFCDKIFTNKKGRDIHLRIHYEHENGPYKCHICGKGFIDENYYRRHVKGHNFDHQSHKIRIAKLRANKVKCPICPRYYPNLIKLIRHIRRTHPETKMIKEDPDAPALTLFHCKVCAKAFRTERRLATHESSHLRRHQFFKCKFCGRKSLSLRFHNVHIKAHLTKKYVDEPLQCPHCPETFVLGYALHKHLKSAHDIEESWIAEGTQADEDGELQELQCGVCMKVLASKGNFGRHIDFHNMLRCNYCFEYFSSLKFLEGHLAFSCEKKKLLGDTEVHPKRVKCHLCYKAFHVQVKLDCHLRTRHGILVKRERREKEREIVCDYCFRVFENEDALNAHRVYHRTVGYYGCIYCSRKFNTMALYKKHKAHHLYQLNVDNPTKCEHCDETFVPFREFIDHMREVHGDDKDWVVMPKESVDGVCNICNKEFNNLQRHLQLHEENKCKKCGEYFLSRPAYDNHLCDIESDDAAETEASAQDAPCKYEECSFCFKALTKGNSKLQHDLIHRGSGSISCRFCALRFKTMDAFNIHAFSHRSRKYTKNPLKCRKCDEQFVKYGPFIKHMRAVHNLHEKMHYRRTVLPEPCAICGASFPNLHNHYRAHLLNRCLECGLYFTSARVFHAHKCGETDATDEHVFQSDVDVAKLIQEYAPKDTTDDQNYYGHNEDEPIVQTNSIAPSLTSQIPAEPLVPISIQSPLISDVLLAYEEQQKMNKKEAAVDDDDDDVVEILDDDPVVASHPIIIIDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01451700;
- 90% Identity
- -
- 80% Identity
- -