Basic Information

Insect: Tinea pellionella
Gene Symbol: -
Assembly: GCA_948150575.1
Location: OX411249.1:1440577-1446322[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.0011 0.061 13.8 1.8 1 23 177 199 177 199 0.98

2 31 0.00046 0.025 15.0 0.2 3 22 232 251 231 251 0.94

3 31 0.0048 0.26 11.8 1.0 1 23 267 290 267 290 0.96

4 31 9.9 5.5e+02 1.4 0.7 2 12 305 315 304 317 0.88

5 31 0.0024 0.13 12.7 0.9 1 23 335 358 335 358 0.96

6 31 0.00026 0.014 15.8 0.1 1 23 374 396 374 396 0.95

7 31 2.1e-06 0.00012 22.4 3.3 2 23 435 456 434 456 0.97

8 31 0.00043 0.024 15.1 1.3 2 23 503 525 503 525 0.94

9 31 0.00061 0.034 14.6 0.9 1 23 575 598 575 598 0.97

10 31 0.00037 0.02 15.3 0.4 1 23 653 675 653 675 0.97

11 31 0.039 2.2 8.9 4.2 1 23 686 708 686 708 0.98

12 31 0.35 20 5.9 2.5 2 23 720 741 719 741 0.96

13 31 0.0027 0.15 12.6 1.4 1 23 751 773 751 773 0.98

14 31 0.26 14 6.3 7.9 1 23 796 818 796 818 0.97

15 31 0.0024 0.13 12.8 1.8 1 23 829 851 829 851 0.98

16 31 4.9e-05 0.0027 18.1 4.4 1 23 859 881 859 881 0.98

17 31 0.00081 0.045 14.2 0.1 2 23 901 923 900 923 0.97

18 31 0.022 1.2 9.7 4.5 1 23 941 963 941 968 0.97

19 31 6.9 3.8e+02 1.8 4.1 1 23 970 992 970 992 0.77

20 31 0.022 1.2 9.7 0.3 2 23 1003 1025 1002 1025 0.94

21 31 0.098 5.4 7.7 0.1 2 23 1048 1069 1047 1069 0.94

22 31 0.36 20 5.9 0.3 2 20 1073 1091 1072 1092 0.92

23 31 3 1.7e+02 3.0 5.6 2 23 1112 1134 1111 1134 0.95

24 31 0.0032 0.18 12.4 0.1 2 23 1150 1171 1149 1171 0.93

25 31 1.9 1.1e+02 3.6 4.3 5 23 1181 1199 1178 1199 0.92

26 31 0.012 0.67 10.5 0.8 2 23 1210 1232 1209 1232 0.95

27 31 0.041 2.2 8.9 1.0 2 23 1249 1267 1249 1267 0.94

28 31 7.2 4e+02 1.8 1.3 2 20 1271 1289 1271 1291 0.84

29 31 1.4 76 4.1 0.5 2 23 1343 1364 1342 1364 0.93

30 31 0.00068 0.038 14.5 0.8 2 23 1375 1397 1374 1397 0.97

31 31 2.6 1.4e+02 3.2 0.8 3 20 1436 1453 1434 1455 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.0011	0.061	13.8	1.8	1	23	177	199	177	199	0.98
2	31	0.00046	0.025	15.0	0.2	3	22	232	251	231	251	0.94
3	31	0.0048	0.26	11.8	1.0	1	23	267	290	267	290	0.96
4	31	9.9	5.5e+02	1.4	0.7	2	12	305	315	304	317	0.88
5	31	0.0024	0.13	12.7	0.9	1	23	335	358	335	358	0.96
6	31	0.00026	0.014	15.8	0.1	1	23	374	396	374	396	0.95
7	31	2.1e-06	0.00012	22.4	3.3	2	23	435	456	434	456	0.97
8	31	0.00043	0.024	15.1	1.3	2	23	503	525	503	525	0.94
9	31	0.00061	0.034	14.6	0.9	1	23	575	598	575	598	0.97
10	31	0.00037	0.02	15.3	0.4	1	23	653	675	653	675	0.97
11	31	0.039	2.2	8.9	4.2	1	23	686	708	686	708	0.98
12	31	0.35	20	5.9	2.5	2	23	720	741	719	741	0.96
13	31	0.0027	0.15	12.6	1.4	1	23	751	773	751	773	0.98
14	31	0.26	14	6.3	7.9	1	23	796	818	796	818	0.97
15	31	0.0024	0.13	12.8	1.8	1	23	829	851	829	851	0.98
16	31	4.9e-05	0.0027	18.1	4.4	1	23	859	881	859	881	0.98
17	31	0.00081	0.045	14.2	0.1	2	23	901	923	900	923	0.97
18	31	0.022	1.2	9.7	4.5	1	23	941	963	941	968	0.97
19	31	6.9	3.8e+02	1.8	4.1	1	23	970	992	970	992	0.77
20	31	0.022	1.2	9.7	0.3	2	23	1003	1025	1002	1025	0.94
21	31	0.098	5.4	7.7	0.1	2	23	1048	1069	1047	1069	0.94
22	31	0.36	20	5.9	0.3	2	20	1073	1091	1072	1092	0.92
23	31	3	1.7e+02	3.0	5.6	2	23	1112	1134	1111	1134	0.95
24	31	0.0032	0.18	12.4	0.1	2	23	1150	1171	1149	1171	0.93
25	31	1.9	1.1e+02	3.6	4.3	5	23	1181	1199	1178	1199	0.92
26	31	0.012	0.67	10.5	0.8	2	23	1210	1232	1209	1232	0.95
27	31	0.041	2.2	8.9	1.0	2	23	1249	1267	1249	1267	0.94
28	31	7.2	4e+02	1.8	1.3	2	20	1271	1289	1271	1291	0.84
29	31	1.4	76	4.1	0.5	2	23	1343	1364	1342	1364	0.93
30	31	0.00068	0.038	14.5	0.8	2	23	1375	1397	1374	1397	0.97
31	31	2.6	1.4e+02	3.2	0.8	3	20	1436	1453	1434	1455	0.86

Sequence Information

Coding Sequence: ATGGCACTCAAGCTTGGAAAATGTAGGCTCTGTCTCAAACTTGGTGATTTTTACTCCATATTTACCGTCGACAATGCAATCCCACTGTCCGAAATGGCTATGGAATGCGCTAAGATCAAGGTTTACGACGGAGACGGTTTACCTGATAAGGTGTGCTCAGAATGCATAGAGAAATTAAGTAGTGCATACATATTCAAGCAGCAGTGCGAGCGCGCTGATGAACAACTTCGAAGAAACTATGTTCCTCCACCAGGATTCAACATAACTCCTTCACCCACCAGACAGAGCAGTGATTCAGGTATCTCACACCATACGGACGTTTCCAATAAAGCCAAGAAGACTATTGAACCCGAATCTAGTACATCATTAGGCCGTAAGCGGAGTCTTGAAAATGAAGACACCAAAAACAGACATAAACCTTCCACTTCAAAAAATCGAGACAAGAGAGCTCGAACAAGATATGATTCTGATGGAGACTATACAGCTTCGCAAGCATCTATAGAAACTGACTCTGACGATCCCTTCATGCACAAATGCGACTCGTGTGATAAAACATTTCCCAGCAGGAGAAGTATGTTATTACATGCACGCATACATAGCAGGGGGGAAAATAATGTATCCAAAAGTAGTCCATTTGTTGAAATACCATTAGATAATGACGACAATGCGGCGGTCGATGAAGATAAAGTTGCTTGTGATGGGTGCGGCAAAACATTCAAACTCAAGATAATGCTCAATCGACACTATCTCACCTGCCCAGACAAGACACAAGACAATGATGCATCTGAAAATAGCGAACACACTTGTAAATTATGTAATGGGAAGTATAAAAGTATGGATGCATTAACAAACCATATAAGAGCTGTTCATAATAGTTCAGCACCTACTCCTGAAACAATGAAGGCTCCCGTGCCCTGTCTGTTTTGTCACAAACCATTTACTGACTATTTTGTGCACGCCGCTCATTTTAATATGTGCACTAAAAGATCTGTCATTGGCACTTACATTTGTTTGGTATGTAAAAGAAAATTTGGCAGAAAAGGTGCTTATTTCACTCACATTAGAGATACACATTTGAATAGTTCGAAAACGGATGATGAGGAGGAAGCTAAAGAATCATATGATTGTCGTTTGTGTGGTAGAAGTGTATCATCACAAGATGAACTGATCAAACATCTTGCAGCACACATGTCTAATATAGATGACACTGGAGCCACATCTGAAGCAGACGACAGACACAGCGTGCTGGATGATTCACAGTCAAATTATTCAGGAACATCTAGTCAAGCGAGTGCTAATCTAAAATGCAAATACTGTGATAAAACATTCACGTATAAGAAATCATTACTGAACCACATGTTGAAGCATACTGCTGATGATGTAACTCTAAAACAAGAACCTTTAGGACTAGAACCAGATCCTCCGCCTTCCTCTCGAGACACCACTCAGGACAGTCAATATTATGATGAATATGATGAAGAAGAGGAGTTGAGCGATGATGACAACACTTGTGACATATGTGATAAACAGTTCTCTTATAAGAGGCTGTTGATACAGCATAAGAAAGCTAAACATAACAAGGGCTCCGGTTATAAAAGGACAGGCATATCGTCCAAGGATTGTAATGTCAAGTGTCTCATCTGTGATATTGACATGAAGGTCTCTAAGAGTAATGAGCACAACAAGATGCATGCAGCTGCAGGTATCAAGCCACGGAACCTGTACACATGCGCATCGTGTACTAATACATTCAACTCTTGTTCAAATCTCGCAGCCCACATTCAAATGGCACACAGGATAAAAAAAAATTCTAATGAGAATGTGAATTTGGCGGATTTTTGTGAAGTCGTTGTGACAAAGACGGAACCCCTGGACGATCTCCAGAGTCACAACGACTTAGGGGTGGTTCCTGATAAATCCACTGATACCAAGAAAGTTCTTATAGATCTAGAAGGCTTCACGTGTCCCATCTGCAGTAAGAAGATGCCTACACTTTCATCTCTCAAGAGACACGTCAACTGGCACTCCGGTGTTGGGAATAAGCTTGAATCTAAATATGAATGTTTTGTATGCAAATTGACATTCCAATTTAAAGGTCACTACAAGTTACATTTGAAAGAACACTATCGAGACCCCAATTTGGATCCAAAGTTTTTGACATGTCAGATTTGTAATCGCAAGAGTAAACATTTGAGAGCGGCACAAATGCATATGAACTTTCACAAACAGATCAGATTCGGGAATAAGGACTATCAATGCTCCATCTGCGAGAGAGTCTTCCAGCATAGAAAGGTATATCTGTCGCATATGGCCATACATTACAAGCGTGGTGAGAGTCTCAAGAATCTCACCATTGGGGATTCCAACGACAATGGCCAGGGAGAACACCAATGTCCACATTGCGAGAAGAAATGCGACTCTGAATCCTCTCTCAAATGCCACATCAACTGGCATAAGTCAAAAGCGTCTCTATATGGTGCACGTTACAACTGCGATTTCTGTGACAAAATATTTACCAACAAGAGAAGACGAGAGCTGCATCTCCGTATTCACTATGAACATGAAAATGGACCCCACAAGTGCCACATCTGCGGCAAAGGATTTATTGACGAGAACTACTACCGCCGACACCTTAAAAGTCACAACTTCGATCACCAGTCCCACAAGAAGCGAATCGCCAAATTGAAAGCTAATAAAGTGAAGTGTCCAATATGTCCTCGCTTATATCCCGACCTCGTGAAGCTTATACGACATCTTCGACGAACTCATCCTGAGACCAAGATGATCAAGGAGGACCCCGACGCCCCCACGCCCACTCTTTTCCACTGCAAGATCTGTGCCAAGGTCTTTAGGACTGAAAGAAGACTCACGACACACGAGAGTTCACATCTCAGGAGGCACCAGTTCTTTAAGTGCAAGTTCTGCGGCAAGAAGTCCTTCTCTCTTCGCTTTCACAATGTCCATATCAAGGGTCATCTCACTAAGAAGTATGTAGATGAGCCCCTTCAGTGCTCCCAATGTCCCGAGACTTTCGTTTTGGGATATGCCTTACACAAACACCTGAAGGCGGCCCATGGTATTGAGGAGACCTGGATTGCGGAGGGCACTCAGGCCGATGAGGATGGAGAACTTCAGGAACTACAGTGTGGCGTCTGTATGAAGGTTTTGGCATCCAAGGGCAATTTCGCACGACACATCGACTTCCACAATTTATTACGATGCAATTATTGCTTCGAATATTTCTCTTCACTCAAATTTTTAGAAGGCCATCTCGCTTTCTCTTGCGAGAAGAAAAAACTAGTGGGTGACACAGAAGTTTATCCCAAGAGAGTGAAATGTCACATTTGTTACAAAGCGTTCCATGTCCAGGTGAAGTTGGACTGTCACCTGCGCACGAGCCACGGCATTCTCGTGAAAAGAGAGCGGCGGGAAAAGGAGAGGCAGATAGTTTGCGACTATTGCTTCAGAGTGTTTGAGAATGAGGACGCACTGAACGCGCATAAAGTATATCACCGCACCATCGGTTATTACGGTTGCATTTATTGCAATAGAAAGTTTAATACTATGACTTCATATAGGAGACACAAAACCCATCATTTGTACCAACTAAATGTGGATAATCCAACGAAGTGCGAGCACTGTGAAGAGACCTTTGTCGCTTTCAGAGACTTCATAGATCACATGCGCGACGTTCACGGAGATGACAAGGAATGGGTGGTCATGCCCAAGGAGTCCGTGGACGGTGTCTGCAACATCTGCAATAAAGAGTTCAATAATTTACAAAGACATCTACAGTTACACGAAGAGAACAGGTGTAAGAAATGCGGCGAATACTTCTTGTCTCGCCCCGACTTCGACAATCACTTGTGCGATATCGAGAGTGACGACGACGCAGAGTCCCATCGCAATGGACACGATTCAGTTTTGCGGCCCAAATACGAAGAATGTTCGTTCTGCTTCAAGGCGCTCACCAAAGGGAATTCGAAATTGCAGCACGACCTCATCCACAAGGGTTCCGGGTCGATCTCCTGTCGTTTCTGTGCGTTGAGATTCAAGACCATGGACGCTTTCAACATACACGCATTTTCACACAGGAATAGAAAGTACACGAGAAATCCTCTCAAGTGTCGGAAATGCGACGAGCGATTCATTAAGTACGGGCCCTTCATAAAACATATGAGGACGGTCCACAAGATGAATGAGAAGATGCATTATCGACGTACAGTACTGCCCGAGCCTTGCGCGGTCTGCGGCGGATTGTTCCCCAATCTGCACAACCACTACCGCGCCCATCTCCTCAACCACTGTCAGGAATGCGGCTTGTACTTCACGTCCGCCCGCATCTTCCAAAATCACAAGTGCGGCGAGACGGATGCTTCCAATGAACACGTTTTCCAGTCTGACGTCGACGTCGCGAGACTCATAAAAGAATATGTACCAAAGGATGCGACAGACGACCAGAACTATTACGAAGTTAAGGACGAAGACGTTGGAGCGATTCAGTTGATGAATTCCACGGAACCGACTGGTAATAGTGTGAAGTCGCAGATATCAGAGGAGCCTTTGGTGCCAATTTCCATTCAGTCGCCATTAATCTCAGAAGTGTTATTGGCTTACGAGAAGCAGCAGAAAATGAAAAAGGCCCTCACTGTCGATGATGATGTGGTGGAGATTATAGATGATGAGGTGGAGATTATAGATGATGATTCTGTAGATGCGTCTCATCCGGTTATCATTATTGATGATGATTAG
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNAIPLSEMAMECAKIKVYDGDGLPDKVCSECIEKLSSAYIFKQQCERADEQLRRNYVPPPGFNITPSPTRQSSDSGISHHTDVSNKAKKTIEPESSTSLGRKRSLENEDTKNRHKPSTSKNRDKRARTRYDSDGDYTASQASIETDSDDPFMHKCDSCDKTFPSRRSMLLHARIHSRGENNVSKSSPFVEIPLDNDDNAAVDEDKVACDGCGKTFKLKIMLNRHYLTCPDKTQDNDASENSEHTCKLCNGKYKSMDALTNHIRAVHNSSAPTPETMKAPVPCLFCHKPFTDYFVHAAHFNMCTKRSVIGTYICLVCKRKFGRKGAYFTHIRDTHLNSSKTDDEEEAKESYDCRLCGRSVSSQDELIKHLAAHMSNIDDTGATSEADDRHSVLDDSQSNYSGTSSQASANLKCKYCDKTFTYKKSLLNHMLKHTADDVTLKQEPLGLEPDPPPSSRDTTQDSQYYDEYDEEEELSDDDNTCDICDKQFSYKRLLIQHKKAKHNKGSGYKRTGISSKDCNVKCLICDIDMKVSKSNEHNKMHAAAGIKPRNLYTCASCTNTFNSCSNLAAHIQMAHRIKKNSNENVNLADFCEVVVTKTEPLDDLQSHNDLGVVPDKSTDTKKVLIDLEGFTCPICSKKMPTLSSLKRHVNWHSGVGNKLESKYECFVCKLTFQFKGHYKLHLKEHYRDPNLDPKFLTCQICNRKSKHLRAAQMHMNFHKQIRFGNKDYQCSICERVFQHRKVYLSHMAIHYKRGESLKNLTIGDSNDNGQGEHQCPHCEKKCDSESSLKCHINWHKSKASLYGARYNCDFCDKIFTNKRRRELHLRIHYEHENGPHKCHICGKGFIDENYYRRHLKSHNFDHQSHKKRIAKLKANKVKCPICPRLYPDLVKLIRHLRRTHPETKMIKEDPDAPTPTLFHCKICAKVFRTERRLTTHESSHLRRHQFFKCKFCGKKSFSLRFHNVHIKGHLTKKYVDEPLQCSQCPETFVLGYALHKHLKAAHGIEETWIAEGTQADEDGELQELQCGVCMKVLASKGNFARHIDFHNLLRCNYCFEYFSSLKFLEGHLAFSCEKKKLVGDTEVYPKRVKCHICYKAFHVQVKLDCHLRTSHGILVKRERREKERQIVCDYCFRVFENEDALNAHKVYHRTIGYYGCIYCNRKFNTMTSYRRHKTHHLYQLNVDNPTKCEHCEETFVAFRDFIDHMRDVHGDDKEWVVMPKESVDGVCNICNKEFNNLQRHLQLHEENRCKKCGEYFLSRPDFDNHLCDIESDDDAESHRNGHDSVLRPKYEECSFCFKALTKGNSKLQHDLIHKGSGSISCRFCALRFKTMDAFNIHAFSHRNRKYTRNPLKCRKCDERFIKYGPFIKHMRTVHKMNEKMHYRRTVLPEPCAVCGGLFPNLHNHYRAHLLNHCQECGLYFTSARIFQNHKCGETDASNEHVFQSDVDVARLIKEYVPKDATDDQNYYEVKDEDVGAIQLMNSTEPTGNSVKSQISEEPLVPISIQSPLISEVLLAYEKQQKMKKALTVDDDVVEIIDDEVEIIDDDSVDASHPVIIIDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01453445;
90% Identity: -
80% Identity: -