Tbis009098.1
Basic Information
- Insect
- Tineola bisselliella
- Gene Symbol
- -
- Assembly
- GCA_028551675.1
- Location
- JAPWLS010002288.1:44089-46924[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.0011 1.3 9.1 0.0 14 41 129 153 124 155 0.85 2 9 0.00017 0.2 11.7 0.5 18 41 161 181 157 183 0.91 3 9 0.0007 0.83 9.7 0.5 19 43 190 211 184 212 0.76 4 9 0.27 3.2e+02 1.4 4.2 18 38 218 235 213 239 0.87 5 9 0.00074 0.88 9.6 2.6 14 41 242 266 236 267 0.88 6 9 0.2 2.4e+02 1.8 0.0 16 31 272 287 268 293 0.85 7 9 0.13 1.6e+02 2.4 0.1 18 38 302 319 299 324 0.75 8 9 0.0024 2.8 8.0 1.5 14 38 326 347 316 350 0.81 9 9 5.9 6.9e+03 -2.8 0.8 18 22 362 366 359 377 0.65
Sequence Information
- Coding Sequence
- ATGTCGAATGACTCTTGTCACAATAGCGGCTCCTATCCCACGCAAACAGAGAAGTTAAAAATGGAAATTGAAATCAAGTTGGAGCCAACGTCTGAAGATGAAGACGTGTCTCCGAAGCTGGCGGCGACAGATAACGGGCTTAAAGATAATTTGAATGAAAAACCTGCTTTAAAAGATGGAGATATGGAATTGAAGGCTGAACCTGTCAGTCACCATGATGATGATAGTGTAAATAATGAAGCAACTGGGGAATGTACAACCAAAGATATACCAAAGAAAGAAACATTAACATGGCCAAAGGACCTGATGCTGATACCACTGAGAAAGAAGTATAATAATGGCGAAAAGCGTGCTATTTATAAGCGCAAAGGATTAGACTATGATGAAAATCCATACAAATGTGTCGAATGTCAGATGGAGTTCTCACAGAGCAGCAATCTGAAGGCGCACCTCCGTACGCATAGTGGTGAGAGACCATACAAGTGCGCAATATGCCATGCTGCGTTCACCAGTAGCAGCAATCTAAAGGAGCATGTGCGCACGCATACCGGCGAGAAGCCCTACATTTGTGATACGTGCCTCACTAAGTTTGCAAACAGTAGCAGCCTCAAGCGTCACGTCAGAAGGATGCACACGAGAGAGAGACCGTACATCTGCAACCAGTGCAATGCTAACTTTTCGACGACTTGTAATCTCAAGACTCATCAGAAGACGCACACGGGTGAAAAAAATTACACATGTAAAATTTGTAAAGTGGGGTTTTCGCAACGCAGTAATATGAGGTCTCATATGCGAACGCACCTCGGTAGATTAAAGTTTGAATGTGACCTTTGCAGTGTCAAGTTCTCACGTCGTGGTGGTCTTCAGGCGCATAAGAGATTTCATTTAGGCGTGAAGCCGTTTAAATGTGATGTTTGTGGAGATTCCTTTTCTTACAAAACACTGCTCCGGTCACACGTGATGATGCATACTGGTCAAAAAGTTTACAAATGTAATATTTGTCGTGCGGAGTTTGTCAATGAAAAGAATTTGAGCAATCACTCTAAGCGAGGGAACTGTGAGCGTAAACTGAGGCCTTGTCTGAAATGCAACATGTGCTTTCCACGCATAAGTCTGTTAAGGAAACATATTTGCATTGAAAATGTATCCATAGATGTCCGATTAAAGAAGAACATATATATTCCAGAATAG
- Protein Sequence
- MSNDSCHNSGSYPTQTEKLKMEIEIKLEPTSEDEDVSPKLAATDNGLKDNLNEKPALKDGDMELKAEPVSHHDDDSVNNEATGECTTKDIPKKETLTWPKDLMLIPLRKKYNNGEKRAIYKRKGLDYDENPYKCVECQMEFSQSSNLKAHLRTHSGERPYKCAICHAAFTSSSNLKEHVRTHTGEKPYICDTCLTKFANSSSLKRHVRRMHTRERPYICNQCNANFSTTCNLKTHQKTHTGEKNYTCKICKVGFSQRSNMRSHMRTHLGRLKFECDLCSVKFSRRGGLQAHKRFHLGVKPFKCDVCGDSFSYKTLLRSHVMMHTGQKVYKCNICRAEFVNEKNLSNHSKRGNCERKLRPCLKCNMCFPRISLLRKHICIENVSIDVRLKKNIYIPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01453763;
- 90% Identity
- iTF_01453763;
- 80% Identity
- iTF_01453763;